RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 RCBTB2O95199 551 aa14.1□□□□□ -0.15
C9orf3-219ENST00000488186 OR5F1O95221 314 aa14.1□□□□□ -0.15
C9orf3-219ENST00000488186 PMS2P2O95744 297 aa14.1□□□□□ -0.15
C9orf3-219ENST00000488186 TGM6O95932 706 aa14.1□□□□□ -0.15
C9orf3-219ENST00000488186 TMIGD3P0DMS9 266 aaPredicted RBP14.1□□□□□ -0.15
C9orf3-219ENST00000488186 ITGA2P17301 1181 aa14.1□□□□□ -0.15
C9orf3-219ENST00000488186 CHRNB4P30926 498 aa14.1□□□□□ -0.15
C9orf3-219ENST00000488186 YAP1P46937 504 aaKnown RBP14.1□□□□□ -0.15
C9orf3-219ENST00000488186 TRAP1Q12931 704 aaKnown RBP14.1□□□□□ -0.15
C9orf3-219ENST00000488186 PIN1Q13526 163 aaPredicted RBP14.1□□□□□ -0.15
C9orf3-219ENST00000488186 FCRLAQ7L513 359 aa14.1□□□□□ -0.15
C9orf3-219ENST00000488186 ADGRE4PQ86SQ3 457 aa14.1□□□□□ -0.15
C9orf3-219ENST00000488186 CCDC71Q8IV32 467 aaPredicted RBP14.1□□□□□ -0.15
C9orf3-219ENST00000488186 C10orf53Q8N6V4 93 aa14.1□□□□□ -0.15
C9orf3-219ENST00000488186 MBD3L2Q8NHZ7 208 aaPredicted RBP14.1□□□□□ -0.15
C9orf3-219ENST00000488186 SLC25A36Q96CQ1 311 aa14.1□□□□□ -0.15
C9orf3-219ENST00000488186 MPP4Q96JB8 637 aa14.1□□□□□ -0.15
C9orf3-219ENST00000488186 PSMG3-AS1Q96PY0 264 aa14.1□□□□□ -0.15
C9orf3-219ENST00000488186 CADM1Q9BY67 442 aaKnown RBP14.1□□□□□ -0.15
C9orf3-219ENST00000488186 SRXN1Q9BYN0 137 aa14.1□□□□□ -0.15
C9orf3-219ENST00000488186 AMBRA1Q9C0C7 1298 aa14.1□□□□□ -0.15
C9orf3-219ENST00000488186 MMADHCQ9H3L0 296 aaPredicted RBP14.1□□□□□ -0.15
C9orf3-219ENST00000488186 COQ10BQ9H8M1 238 aa14.1□□□□□ -0.15
C9orf3-219ENST00000488186 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.1□□□□□ -0.15
C9orf3-219ENST00000488186 C6orf203Q9P0P8 240 aaPredicted RBP14.1□□□□□ -0.15
C9orf3-219ENST00000488186 RNF6Q9Y252 685 aa14.1□□□□□ -0.15
C9orf3-219ENST00000488186 ARHGAP21Q5T5U3 1957 aa14.09□□□□□ -0.15
C9orf3-219ENST00000488186 A0A0G2JNJ9 132 aa14.09□□□□□ -0.15
C9orf3-219ENST00000488186 ZC3H12DA2A288 527 aaKnown RBP14.09□□□□□ -0.15
C9orf3-219ENST00000488186 DVL2O14641 736 aa14.09□□□□□ -0.15
C9orf3-219ENST00000488186 OR2T1O43869 369 aa14.09□□□□□ -0.15
C9orf3-219ENST00000488186 FPR1P21462 350 aa14.09□□□□□ -0.15
C9orf3-219ENST00000488186 CTSSP25774 331 aa14.09□□□□□ -0.15
C9orf3-219ENST00000488186 CEACAM8P31997 349 aaPredicted RBP14.09□□□□□ -0.15
C9orf3-219ENST00000488186 RPS5P46782 204 aaKnown RBP14.09□□□□□ -0.15
C9orf3-219ENST00000488186 CTBP2P56545 445 aa14.09□□□□□ -0.15
C9orf3-219ENST00000488186 ADORA2A-AS1P86434 159 aa14.09□□□□□ -0.15
C9orf3-219ENST00000488186 MS4A2Q01362 244 aa14.09□□□□□ -0.15
C9orf3-219ENST00000488186 ST3GAL3Q11203 375 aa14.09□□□□□ -0.15
C9orf3-219ENST00000488186 OR7A5Q15622 319 aa14.09□□□□□ -0.15
C9orf3-219ENST00000488186 ZNF239Q16600 458 aaKnown RBP14.09□□□□□ -0.15
C9orf3-219ENST00000488186 EEF1A1P5Q5VTE0 462 aa14.09□□□□□ -0.15
C9orf3-219ENST00000488186 SEM1Q6ZVN7 128 aa14.09□□□□□ -0.15
C9orf3-219ENST00000488186 GDF7Q7Z4P5 450 aa14.09□□□□□ -0.15
C9orf3-219ENST00000488186 GCNT2Q8N0V5 402 aa14.09□□□□□ -0.15
C9orf3-219ENST00000488186 SLC43A2Q8N370 569 aa14.09□□□□□ -0.15
C9orf3-219ENST00000488186 ZNF808Q8N4W9 903 aaPredicted RBP14.09□□□□□ -0.15
C9orf3-219ENST00000488186 CNEP1R1Q8N9A8 125 aa14.09□□□□□ -0.15
C9orf3-219ENST00000488186 PRRC1Q96M27 445 aa14.09□□□□□ -0.15
C9orf3-219ENST00000488186 SEPHS2Q99611 448 aa14.09□□□□□ -0.15
C9orf3-219ENST00000488186 Q9UFV3 132 aa14.09□□□□□ -0.15
C9orf3-219ENST00000488186 TRAV36DV7A0A075B6V5 113 aa14.08□□□□□ -0.16
C9orf3-219ENST00000488186 IGHV3-15A0A0B4J1V0 119 aa14.08□□□□□ -0.16
C9orf3-219ENST00000488186 hCG_2039718K7EN88 272 aa14.08□□□□□ -0.16
C9orf3-219ENST00000488186 DNPH1O43598 174 aa14.08□□□□□ -0.16
C9orf3-219ENST00000488186 AQP8O94778 261 aa14.08□□□□□ -0.16
C9orf3-219ENST00000488186 TOXO94900 526 aa14.08□□□□□ -0.16
C9orf3-219ENST00000488186 THRBP10828 461 aa14.08□□□□□ -0.16
C9orf3-219ENST00000488186 ATP6V1B2P21281 511 aa14.08□□□□□ -0.16
C9orf3-219ENST00000488186 OPRM1P35372 400 aa14.08□□□□□ -0.16
C9orf3-219ENST00000488186 FLOT2Q14254 428 aa14.08□□□□□ -0.16
C9orf3-219ENST00000488186 RNPS1Q15287 305 aaKnown RBP14.08□□□□□ -0.16
C9orf3-219ENST00000488186 LCN8Q6JVE9 175 aa14.08□□□□□ -0.16
C9orf3-219ENST00000488186 RRM2BQ7LG56 351 aa14.08□□□□□ -0.16
C9orf3-219ENST00000488186 P3H2Q8IVL5 708 aa14.08□□□□□ -0.16
C9orf3-219ENST00000488186 HS6ST2Q96MM7 605 aa14.08□□□□□ -0.16
C9orf3-219ENST00000488186 TMEM43Q9BTV4 400 aa14.08□□□□□ -0.16
C9orf3-219ENST00000488186 LRMDAQ9H2I8 198 aa14.08□□□□□ -0.16
C9orf3-219ENST00000488186 GLRX2Q9NS18 164 aa14.08□□□□□ -0.16
C9orf3-219ENST00000488186 RHCGQ9UBD6 479 aa14.08□□□□□ -0.16
C9orf3-219ENST00000488186 EMC9Q9Y3B6 208 aa14.08□□□□□ -0.16
C9orf3-219ENST00000488186 ENPP4Q9Y6X5 453 aa14.08□□□□□ -0.16
C9orf3-219ENST00000488186 LIPT2A6NK58 231 aa14.07□□□□□ -0.16
C9orf3-219ENST00000488186 J3KTA2 159 aa14.07□□□□□ -0.16
C9orf3-219ENST00000488186 CIB2O75838 187 aa14.07□□□□□ -0.16
C9orf3-219ENST00000488186 FABP3P05413 133 aa14.07□□□□□ -0.16
C9orf3-219ENST00000488186 CRHP06850 196 aa14.07□□□□□ -0.16
C9orf3-219ENST00000488186 IMPDH2P12268 514 aa14.07□□□□□ -0.16
C9orf3-219ENST00000488186 PTNP21246 168 aa14.07□□□□□ -0.16
C9orf3-219ENST00000488186 BMP5P22003 454 aa14.07□□□□□ -0.16
C9orf3-219ENST00000488186 AGFG1P52594 562 aaKnown RBP14.07□□□□□ -0.16
C9orf3-219ENST00000488186 SIRPAP78324 504 aa14.07□□□□□ -0.16
C9orf3-219ENST00000488186 CHRNB3Q05901 458 aa14.07□□□□□ -0.16
C9orf3-219ENST00000488186 RASGEF1BQ0VAM2 473 aa14.07□□□□□ -0.16
C9orf3-219ENST00000488186 TRAM2Q15035 370 aa14.07□□□□□ -0.16
C9orf3-219ENST00000488186 FAM98BQ52LJ0 330 aaKnown RBP14.07□□□□□ -0.16
C9orf3-219ENST00000488186 TMEM201Q5SNT2 666 aa14.07□□□□□ -0.16
C9orf3-219ENST00000488186 PGM2L1Q6PCE3 622 aa14.07□□□□□ -0.16
C9orf3-219ENST00000488186 SPATA24Q86W54 205 aa14.07□□□□□ -0.16
C9orf3-219ENST00000488186 FAM86B1Q8N7N1 296 aa14.07□□□□□ -0.16
C9orf3-219ENST00000488186 MFSD8Q8NHS3 518 aa14.07□□□□□ -0.16
C9orf3-219ENST00000488186 ITLN2Q8WWU7 325 aaPredicted RBP14.07□□□□□ -0.16
C9orf3-219ENST00000488186 KTI12Q96EK9 354 aaPredicted RBP14.07□□□□□ -0.16
C9orf3-219ENST00000488186 GMPPAQ96IJ6 420 aaPredicted RBP14.07□□□□□ -0.16
C9orf3-219ENST00000488186 RNF122Q9H9V4 155 aa14.07□□□□□ -0.16
C9orf3-219ENST00000488186 KLHL9Q9P2J3 617 aa14.07□□□□□ -0.16
C9orf3-219ENST00000488186 ZNF629Q9UEG4 869 aaPredicted RBP14.07□□□□□ -0.16
C9orf3-219ENST00000488186 CLEC4AQ9UMR7 237 aa14.07□□□□□ -0.16
C9orf3-219ENST00000488186 HECTD1Q9ULT8 2610 aa14.06□□□□□ -0.16
C9orf3-219ENST00000488186 KPNA4O00629 521 aaPredicted RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms