RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 MMP12P39900 470 aa3.75□□□□□ -1.81
PTCD3-214ENST00000483925 VHLP40337 213 aa3.75□□□□□ -1.81
PTCD3-214ENST00000483925 ETV5P41161 510 aa3.75□□□□□ -1.81
PTCD3-214ENST00000483925 ELK3P41970 407 aa3.75□□□□□ -1.81
PTCD3-214ENST00000483925 NSG1P42857 185 aa3.75□□□□□ -1.81
PTCD3-214ENST00000483925 TMED10P49755 219 aaKnown RBP3.75□□□□□ -1.81
PTCD3-214ENST00000483925 DAP3P51398 398 aaKnown RBP3.75□□□□□ -1.81
PTCD3-214ENST00000483925 HNRNPA3P51991 378 aaKnown RBP3.75□□□□□ -1.81
PTCD3-214ENST00000483925 ART1P52961 327 aa3.75□□□□□ -1.81
PTCD3-214ENST00000483925 HSPA2P54652 639 aa3.75□□□□□ -1.81
PTCD3-214ENST00000483925 RND3P61587 244 aa3.75□□□□□ -1.81
PTCD3-214ENST00000483925 ERVK-25P63136 954 aa3.75□□□□□ -1.81
PTCD3-214ENST00000483925 CSNK1G2P78368 415 aa3.75□□□□□ -1.81
PTCD3-214ENST00000483925 GSTO1P78417 241 aa3.75□□□□□ -1.81
PTCD3-214ENST00000483925 MRPS15P82914 257 aaKnown RBP3.75□□□□□ -1.81
PTCD3-214ENST00000483925 STX3Q13277 289 aa3.75□□□□□ -1.81
PTCD3-214ENST00000483925 TEAD2Q15562 447 aa3.75□□□□□ -1.81
PTCD3-214ENST00000483925 DGUOKQ16854 277 aa3.75□□□□□ -1.81
PTCD3-214ENST00000483925 ISXQ2M1V0 245 aa3.75□□□□□ -1.81
PTCD3-214ENST00000483925 ZNF672Q499Z4 452 aaPredicted RBP3.75□□□□□ -1.81
PTCD3-214ENST00000483925 GTDC1Q4AE62 458 aa3.75□□□□□ -1.81
PTCD3-214ENST00000483925 LY6G6FQ5SQ64 297 aa3.75□□□□□ -1.81
PTCD3-214ENST00000483925 WDR25Q64LD2 544 aaPredicted RBP3.75□□□□□ -1.81
PTCD3-214ENST00000483925 PTRHD1Q6GMV3 140 aaKnown RBP3.75□□□□□ -1.81
PTCD3-214ENST00000483925 CREB3L2Q70SY1 520 aa3.75□□□□□ -1.81
PTCD3-214ENST00000483925 IQCKQ8N0W5 287 aa3.75□□□□□ -1.81
PTCD3-214ENST00000483925 OR2L13Q8N349 312 aa3.75□□□□□ -1.81
PTCD3-214ENST00000483925 OR52H1Q8NGJ2 320 aa3.75□□□□□ -1.81
PTCD3-214ENST00000483925 CA5BP1Q8WTZ4 195 aa3.75□□□□□ -1.81
PTCD3-214ENST00000483925 HTR3CQ8WXA8 447 aa3.75□□□□□ -1.81
PTCD3-214ENST00000483925 CACNG8Q8WXS5 425 aa3.75□□□□□ -1.81
PTCD3-214ENST00000483925 TNFRSF14Q92956 283 aa3.75□□□□□ -1.81
PTCD3-214ENST00000483925 CD101Q93033 1021 aa3.75□□□□□ -1.81
PTCD3-214ENST00000483925 FAF2Q96CS3 445 aa3.75□□□□□ -1.81
PTCD3-214ENST00000483925 NTNG2Q96CW9 530 aa3.75□□□□□ -1.81
PTCD3-214ENST00000483925 ECHDC3Q96DC8 303 aa3.75□□□□□ -1.81
PTCD3-214ENST00000483925 KCNA7Q96RP8 456 aa3.75□□□□□ -1.81
PTCD3-214ENST00000483925 RNF2Q99496 336 aa3.75□□□□□ -1.81
PTCD3-214ENST00000483925 TMEM246Q9BRR3 403 aa3.75□□□□□ -1.81
PTCD3-214ENST00000483925 ZNF670Q9BS34 389 aa3.75□□□□□ -1.81
PTCD3-214ENST00000483925 MCRIP2Q9BUT9 160 aaKnown RBP3.75□□□□□ -1.81
PTCD3-214ENST00000483925 ZNF385DQ9H6B1 395 aa3.75□□□□□ -1.81
PTCD3-214ENST00000483925 REEP4Q9H6H4 257 aa3.75□□□□□ -1.81
PTCD3-214ENST00000483925 ZNF275Q9NSD4 429 aaPredicted RBP3.75□□□□□ -1.81
PTCD3-214ENST00000483925 NKIRAS1Q9NYS0 192 aa3.75□□□□□ -1.81
PTCD3-214ENST00000483925 WRAP73Q9P2S5 460 aaPredicted RBP3.75□□□□□ -1.81
PTCD3-214ENST00000483925 UXTQ9UBK9 157 aaPredicted RBP3.75□□□□□ -1.81
PTCD3-214ENST00000483925 DDX19BQ9UMR2 479 aa3.75□□□□□ -1.81
PTCD3-214ENST00000483925 MRPS18CQ9Y3D5 142 aaKnown RBP3.75□□□□□ -1.81
PTCD3-214ENST00000483925 TTC3P53804 2025 aa3.75□□□□□ -1.81
PTCD3-214ENST00000483925 AQRO60306 1485 aaKnown RBP eCLIP3.74□□□□□ -1.815e-8■■■■□ 20.9
PTCD3-214ENST00000483925 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.74□□□□□ -1.81
PTCD3-214ENST00000483925 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.74□□□□□ -1.81
PTCD3-214ENST00000483925 CLEC18AA5D8T8 446 aa3.74□□□□□ -1.81
PTCD3-214ENST00000483925 CENPXA8MT69 81 aa3.74□□□□□ -1.81
PTCD3-214ENST00000483925 C16orf97H3BN30 126 aa3.74□□□□□ -1.81
PTCD3-214ENST00000483925 SIVA1O15304 175 aa3.74□□□□□ -1.81
PTCD3-214ENST00000483925 TOM1O60784 492 aa3.74□□□□□ -1.81
PTCD3-214ENST00000483925 DPEP1P16444 411 aa3.74□□□□□ -1.81
PTCD3-214ENST00000483925 PMCHP20382 165 aa3.74□□□□□ -1.81
PTCD3-214ENST00000483925 FASP25445 335 aa3.74□□□□□ -1.81
PTCD3-214ENST00000483925 IL12AP29459 219 aa3.74□□□□□ -1.81
PTCD3-214ENST00000483925 TNFSF9P41273 254 aa3.74□□□□□ -1.81
PTCD3-214ENST00000483925 XCR1P46094 333 aa3.74□□□□□ -1.81
PTCD3-214ENST00000483925 YAP1P46937 504 aaKnown RBP3.74□□□□□ -1.81
PTCD3-214ENST00000483925 SLC26A2P50443 739 aa3.74□□□□□ -1.81
PTCD3-214ENST00000483925 GSCP56915 257 aaPredicted RBP3.74□□□□□ -1.81
PTCD3-214ENST00000483925 RPL8P62917 257 aaKnown RBP3.74□□□□□ -1.81
PTCD3-214ENST00000483925 MAPRE2Q15555 327 aa3.74□□□□□ -1.81
PTCD3-214ENST00000483925 DUSP7Q16829 419 aa3.74□□□□□ -1.81
PTCD3-214ENST00000483925 HLA-BQ31612 363 aa3.74□□□□□ -1.81
PTCD3-214ENST00000483925 MOGAT2Q3SYC2 334 aa3.74□□□□□ -1.81
PTCD3-214ENST00000483925 TIGITQ495A1 244 aa3.74□□□□□ -1.81
PTCD3-214ENST00000483925 SPESP1Q6UW49 350 aa3.74□□□□□ -1.81
PTCD3-214ENST00000483925 ADAMTSL5Q6ZMM2 481 aa3.74□□□□□ -1.81
PTCD3-214ENST00000483925 SLC25A48Q6ZT89 311 aaKnown RBP3.74□□□□□ -1.81
PTCD3-214ENST00000483925 ARCQ7LC44 396 aa3.74□□□□□ -1.81
PTCD3-214ENST00000483925 BHLHA15Q7RTS1 189 aaPredicted RBP3.74□□□□□ -1.81
PTCD3-214ENST00000483925 PID1Q7Z2X4 250 aa3.74□□□□□ -1.81
PTCD3-214ENST00000483925 NFE4Q86UQ8 179 aa3.74□□□□□ -1.81
PTCD3-214ENST00000483925 ERICH1Q86X53 443 aa3.74□□□□□ -1.81
PTCD3-214ENST00000483925 SAMD12Q8N8I0 201 aa3.74□□□□□ -1.81
PTCD3-214ENST00000483925 CLEC18CQ8NCF0 446 aa3.74□□□□□ -1.81
PTCD3-214ENST00000483925 ZNF248Q8NDW4 579 aa3.74□□□□□ -1.81
PTCD3-214ENST00000483925 OR7G1Q8NGA0 311 aa3.74□□□□□ -1.81
PTCD3-214ENST00000483925 OR5AP2Q8NGF4 316 aa3.74□□□□□ -1.81
PTCD3-214ENST00000483925 OR2T11Q8NH01 316 aa3.74□□□□□ -1.81
PTCD3-214ENST00000483925 SETD7Q8WTS6 366 aaKnown RBP3.74□□□□□ -1.81
PTCD3-214ENST00000483925 NUDCD2Q8WVJ2 157 aa3.74□□□□□ -1.81
PTCD3-214ENST00000483925 UFD1Q92890 307 aa3.74□□□□□ -1.81
PTCD3-214ENST00000483925 WBP1Q96G27 269 aa3.74□□□□□ -1.81
PTCD3-214ENST00000483925 ZNF354BQ96LW1 612 aa3.74□□□□□ -1.81
PTCD3-214ENST00000483925 TNFRSF13CQ96RJ3 184 aa3.74□□□□□ -1.81
PTCD3-214ENST00000483925 GBA3Q9H227 469 aa3.74□□□□□ -1.81
PTCD3-214ENST00000483925 OR51M1Q9H341 326 aa3.74□□□□□ -1.81
PTCD3-214ENST00000483925 PPDPFQ9H3Y8 114 aa3.74□□□□□ -1.81
PTCD3-214ENST00000483925 RNF41Q9H4P4 317 aaPredicted RBP3.74□□□□□ -1.81
PTCD3-214ENST00000483925 MRPL47Q9HD33 250 aaKnown RBP3.74□□□□□ -1.81
PTCD3-214ENST00000483925 SIX2Q9NPC8 291 aa3.74□□□□□ -1.81
PTCD3-214ENST00000483925 SAMSN1Q9NSI8 373 aaKnown RBP3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms