RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 TFF3Q07654 80 aa6.16□□□□□ -1.42
BRCA1-215ENST00000478531 SNTB1Q13884 538 aaKnown RBP6.16□□□□□ -1.42
BRCA1-215ENST00000478531 OR7A5Q15622 319 aa6.16□□□□□ -1.42
BRCA1-215ENST00000478531 ENTPD8Q5MY95 495 aa6.16□□□□□ -1.42
BRCA1-215ENST00000478531 ZNF787Q6DD87 383 aa6.16□□□□□ -1.42
BRCA1-215ENST00000478531 C16orf89Q6UX73 402 aa6.16□□□□□ -1.42
BRCA1-215ENST00000478531 TMPPEQ6ZT21 453 aa6.16□□□□□ -1.42
BRCA1-215ENST00000478531 VTCN1Q7Z7D3 282 aa6.16□□□□□ -1.42
BRCA1-215ENST00000478531 CARM1Q86X55 608 aa6.16□□□□□ -1.42
BRCA1-215ENST00000478531 PGAM4Q8N0Y7 254 aa6.16□□□□□ -1.42
BRCA1-215ENST00000478531 DNAJA4Q8WW22 397 aaPredicted RBP6.16□□□□□ -1.42
BRCA1-215ENST00000478531 ZNF775Q96BV0 537 aaPredicted RBP6.16□□□□□ -1.42
BRCA1-215ENST00000478531 ZHX1-C8orf76Q96EF9 292 aa6.16□□□□□ -1.42
BRCA1-215ENST00000478531 GMPPAQ96IJ6 420 aaPredicted RBP6.16□□□□□ -1.42
BRCA1-215ENST00000478531 NSL1Q96IY1 281 aa6.16□□□□□ -1.42
BRCA1-215ENST00000478531 CDRT15Q96T59 188 aa6.16□□□□□ -1.42
BRCA1-215ENST00000478531 OPN3Q9H1Y3 402 aaPredicted RBP6.16□□□□□ -1.42
BRCA1-215ENST00000478531 C12orf49Q9H741 205 aa6.16□□□□□ -1.42
BRCA1-215ENST00000478531 TMEM27Q9HBJ8 222 aa6.16□□□□□ -1.42
BRCA1-215ENST00000478531 CHST11Q9NPF2 352 aa6.16□□□□□ -1.42
BRCA1-215ENST00000478531 NPDC1Q9NQX5 325 aaPredicted RBP6.16□□□□□ -1.42
BRCA1-215ENST00000478531 NDE1Q9NXR1 346 aa6.16□□□□□ -1.42
BRCA1-215ENST00000478531 TMEM181Q9P2C4 612 aa6.16□□□□□ -1.42
BRCA1-215ENST00000478531 KLHL13Q9P2N7 655 aa6.16□□□□□ -1.42
BRCA1-215ENST00000478531 BAG5Q9UL15 447 aa6.16□□□□□ -1.42
BRCA1-215ENST00000478531 HDGFL3Q9Y3E1 203 aa6.16□□□□□ -1.42
BRCA1-215ENST00000478531 AKAP6Q13023 2319 aa6.15□□□□□ -1.42
BRCA1-215ENST00000478531 A0A0B4J2E0 115 aa6.15□□□□□ -1.42
BRCA1-215ENST00000478531 A0A1B0GX12 115 aa6.15□□□□□ -1.42
BRCA1-215ENST00000478531 A8MVM7 634 aa6.15□□□□□ -1.42
BRCA1-215ENST00000478531 TMEM229AB2RXF0 380 aa6.15□□□□□ -1.42
BRCA1-215ENST00000478531 SS18L1O75177 396 aaPredicted RBP6.15□□□□□ -1.42
BRCA1-215ENST00000478531 IL18BPO95998 194 aa6.15□□□□□ -1.42
BRCA1-215ENST00000478531 IMPDH2P12268 514 aa6.15□□□□□ -1.42
BRCA1-215ENST00000478531 COX6B1P14854 86 aa6.15□□□□□ -1.42
BRCA1-215ENST00000478531 FPR1P21462 350 aa6.15□□□□□ -1.42
BRCA1-215ENST00000478531 CALB2P22676 271 aa6.15□□□□□ -1.42
BRCA1-215ENST00000478531 FKBP2P26885 142 aaKnown RBP6.15□□□□□ -1.42
BRCA1-215ENST00000478531 GTF2E2P29084 291 aaKnown RBP6.15□□□□□ -1.42
BRCA1-215ENST00000478531 AGTR1P30556 359 aa6.15□□□□□ -1.42
BRCA1-215ENST00000478531 MSX2P35548 267 aaPredicted RBP6.15□□□□□ -1.42
BRCA1-215ENST00000478531 KIR2DL2P43627 348 aaPredicted RBP6.15□□□□□ -1.42
BRCA1-215ENST00000478531 RPS5P46782 204 aaKnown RBP6.15□□□□□ -1.42
BRCA1-215ENST00000478531 CDH12P55289 794 aa6.15□□□□□ -1.42
BRCA1-215ENST00000478531 RASGEF1BQ0VAM2 473 aa6.15□□□□□ -1.42
BRCA1-215ENST00000478531 CEACAM7Q14002 265 aa6.15□□□□□ -1.42
BRCA1-215ENST00000478531 RNPS1Q15287 305 aaKnown RBP6.15□□□□□ -1.42
BRCA1-215ENST00000478531 EXOC3L2Q2M3D2 409 aa6.15□□□□□ -1.42
BRCA1-215ENST00000478531 SAMD4BQ5PRF9 694 aaKnown RBP6.15□□□□□ -1.42
BRCA1-215ENST00000478531 C1orf140Q5VVS0 124 aa6.15□□□□□ -1.42
BRCA1-215ENST00000478531 SP5Q6BEB4 398 aaPredicted RBP6.15□□□□□ -1.42
BRCA1-215ENST00000478531 GTF2IRD2BQ6EKJ0 949 aa6.15□□□□□ -1.42
BRCA1-215ENST00000478531 ULK3Q6PHR2 472 aa6.15□□□□□ -1.42
BRCA1-215ENST00000478531 MEX3BQ6ZN04 569 aaKnown RBP6.15□□□□□ -1.42
BRCA1-215ENST00000478531 FAM214BQ7L5A3 538 aa6.15□□□□□ -1.42
BRCA1-215ENST00000478531 TRPM8Q7Z2W7 1104 aa6.15□□□□□ -1.42
BRCA1-215ENST00000478531 BTLAQ7Z6A9 289 aa6.15□□□□□ -1.42
BRCA1-215ENST00000478531 GTF2IRD2Q86UP8 949 aa6.15□□□□□ -1.42
BRCA1-215ENST00000478531 CCDC103Q8IW40 242 aa6.15□□□□□ -1.42
BRCA1-215ENST00000478531 TUSC5Q8IXB3 177 aa6.15□□□□□ -1.42
BRCA1-215ENST00000478531 LSMEM1Q8N8F7 131 aa6.15□□□□□ -1.42
BRCA1-215ENST00000478531 RBM15BQ8NDT2 890 aaKnown RBP6.15□□□□□ -1.42
BRCA1-215ENST00000478531 ADAMTS16Q8TE57 1224 aa6.15□□□□□ -1.42
BRCA1-215ENST00000478531 LZICQ8WZA0 190 aa6.15□□□□□ -1.42
BRCA1-215ENST00000478531 SLC25A36Q96CQ1 311 aa6.15□□□□□ -1.42
BRCA1-215ENST00000478531 STARD4Q96DR4 205 aa6.15□□□□□ -1.42
BRCA1-215ENST00000478531 LRRC46Q96FV0 321 aa6.15□□□□□ -1.42
BRCA1-215ENST00000478531 HSH2DQ96JZ2 352 aa6.15□□□□□ -1.42
BRCA1-215ENST00000478531 RBM24Q9BX46 236 aaKnown RBP6.15□□□□□ -1.42
BRCA1-215ENST00000478531 TAPBPLQ9BX59 468 aa6.15□□□□□ -1.42
BRCA1-215ENST00000478531 C6orf203Q9P0P8 240 aaPredicted RBP6.15□□□□□ -1.42
BRCA1-215ENST00000478531 KLHL9Q9P2J3 617 aa6.15□□□□□ -1.42
BRCA1-215ENST00000478531 SLC7A7Q9UM01 511 aa6.15□□□□□ -1.42
BRCA1-215ENST00000478531 PROCRQ9UNN8 238 aa6.15□□□□□ -1.42
BRCA1-215ENST00000478531 TMA7Q9Y2S6 64 aaKnown RBP6.15□□□□□ -1.42
BRCA1-215ENST00000478531 V9GYQ6 96 aa6.15□□□□□ -1.42
BRCA1-215ENST00000478531 ABCA4P78363 2273 aa6.15□□□□□ -1.43
BRCA1-215ENST00000478531 SPG11Q96JI7 2443 aa6.15□□□□□ -1.43
BRCA1-215ENST00000478531 LIPT2A6NK58 231 aa6.15□□□□□ -1.43
BRCA1-215ENST00000478531 ZNF814B7Z6K7 855 aa6.15□□□□□ -1.43
BRCA1-215ENST00000478531 KPNA4O00629 521 aaPredicted RBP6.15□□□□□ -1.43
BRCA1-215ENST00000478531 FMO6PO60774 539 aa6.15□□□□□ -1.43
BRCA1-215ENST00000478531 RAMP1O60894 148 aa6.15□□□□□ -1.43
BRCA1-215ENST00000478531 GMNNO75496 209 aa6.15□□□□□ -1.43
BRCA1-215ENST00000478531 PRKD3O94806 890 aa6.15□□□□□ -1.43
BRCA1-215ENST00000478531 UBOX5O94941 541 aa6.15□□□□□ -1.43
BRCA1-215ENST00000478531 AKR7A3O95154 331 aa6.15□□□□□ -1.43
BRCA1-215ENST00000478531 AHSA1O95433 338 aa6.15□□□□□ -1.43
BRCA1-215ENST00000478531 GPIP06744 558 aa6.15□□□□□ -1.43
BRCA1-215ENST00000478531 CRHP06850 196 aa6.15□□□□□ -1.43
BRCA1-215ENST00000478531 PNMTP11086 282 aa6.15□□□□□ -1.43
BRCA1-215ENST00000478531 GGT1P19440 569 aa6.15□□□□□ -1.43
BRCA1-215ENST00000478531 CBLP22681 906 aa6.15□□□□□ -1.43
BRCA1-215ENST00000478531 CLK1P49759 484 aaKnown RBP6.15□□□□□ -1.43
BRCA1-215ENST00000478531 MAP2K6P52564 334 aa6.15□□□□□ -1.43
BRCA1-215ENST00000478531 TAS2R41P59536 307 aa6.15□□□□□ -1.43
BRCA1-215ENST00000478531 SLC35A1P78382 337 aa6.15□□□□□ -1.43
BRCA1-215ENST00000478531 GUSBP1Q15486 140 aa6.15□□□□□ -1.43
BRCA1-215ENST00000478531 TMEM201Q5SNT2 666 aa6.15□□□□□ -1.43
BRCA1-215ENST00000478531 ABLIM2Q6H8Q1 611 aa6.15□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms