RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 KISS1RQ969F8 398 aaPredicted RBP21.3■■□□□ 1
CPNE1-223ENST00000475146 ZNF317Q96PQ6 595 aaPredicted RBP21.3■■□□□ 1
CPNE1-223ENST00000475146 TAPBPLQ9BX59 468 aa21.3■■□□□ 1
CPNE1-223ENST00000475146 OR10A4Q9H209 315 aa21.3■■□□□ 1
CPNE1-223ENST00000475146 KAT8Q9H7Z6 458 aaKnown RBP21.3■■□□□ 1
CPNE1-223ENST00000475146 AKAP6Q13023 2319 aa21.3■■□□□ 1
CPNE1-223ENST00000475146 CSMD1Q96PZ7 3565 aa21.29■■□□□ 1
CPNE1-223ENST00000475146 LIPT2A6NK58 231 aa21.29■■□□□ 1
CPNE1-223ENST00000475146 ELOA3DA6NLF2 546 aaPredicted RBP21.29■■□□□ 1
CPNE1-223ENST00000475146 THBDP07204 575 aa21.29■■□□□ 1
CPNE1-223ENST00000475146 DNASE1P24855 282 aa21.29■■□□□ 1
CPNE1-223ENST00000475146 EDNRAP25101 427 aa21.29■■□□□ 1
CPNE1-223ENST00000475146 SLC16A1P53985 500 aa21.29■■□□□ 1
CPNE1-223ENST00000475146 IST1P53990 364 aa21.29■■□□□ 1
CPNE1-223ENST00000475146 RGS8P57771 180 aaPredicted RBP21.29■■□□□ 1
CPNE1-223ENST00000475146 H3F3AP84243 136 aa21.29■■□□□ 1
CPNE1-223ENST00000475146 P2RY6Q15077 328 aa21.29■■□□□ 1
CPNE1-223ENST00000475146 ELOA3BQ3SY89 546 aa21.29■■□□□ 1
CPNE1-223ENST00000475146 COQ5Q5HYK3 327 aa21.29■■□□□ 1
CPNE1-223ENST00000475146 OTUD3Q5T2D3 398 aaPredicted RBP21.29■■□□□ 1
CPNE1-223ENST00000475146 SFRP5Q5T4F7 317 aa21.29■■□□□ 1
CPNE1-223ENST00000475146 ALKBH2Q6NS38 261 aa21.29■■□□□ 1
CPNE1-223ENST00000475146 PAQR6Q6TCH4 344 aa21.29■■□□□ 1
CPNE1-223ENST00000475146 PAMR1Q6UXH9 720 aa21.29■■□□□ 1
CPNE1-223ENST00000475146 NET1Q7Z628 596 aaPredicted RBP21.29■■□□□ 1
CPNE1-223ENST00000475146 SMYD1Q8NB12 490 aa21.29■■□□□ 1
CPNE1-223ENST00000475146 ELOA3Q8NG57 546 aa21.29■■□□□ 1
CPNE1-223ENST00000475146 OR52E4Q8NGH9 312 aa21.29■■□□□ 1
CPNE1-223ENST00000475146 S100PBPQ96BU1 408 aa21.29■■□□□ 1
CPNE1-223ENST00000475146 LRRC58Q96CX6 371 aa21.29■■□□□ 1
CPNE1-223ENST00000475146 HDHD5Q9BXW7 423 aa21.29■■□□□ 1
CPNE1-223ENST00000475146 PIF1Q9H611 641 aa21.29■■□□□ 1
CPNE1-223ENST00000475146 PLEKHF2Q9H8W4 249 aa21.29■■□□□ 1
CPNE1-223ENST00000475146 CCM2LQ9NUG4 571 aaPredicted RBP21.29■■□□□ 1
CPNE1-223ENST00000475146 ADPRHL2Q9NX46 363 aa21.29■■□□□ 1
CPNE1-223ENST00000475146 TESQ9UGI8 421 aaKnown RBP21.29■■□□□ 1
CPNE1-223ENST00000475146 CSMD2Q7Z408 3487 aa21.28■■□□□ 1
CPNE1-223ENST00000475146 LOC100653049A0A140TA62 436 aa21.28■■□□□ 1
CPNE1-223ENST00000475146 A0A1W2PPR1 153 aa21.28■■□□□ 1
CPNE1-223ENST00000475146 TMEM229AB2RXF0 380 aa21.28■■□□□ 1
CPNE1-223ENST00000475146 KRT34O76011 436 aa21.28■■□□□ 1
CPNE1-223ENST00000475146 MFN2O95140 757 aa21.28■■□□□ 1
CPNE1-223ENST00000475146 AKR7A3O95154 331 aa21.28■■□□□ 1
CPNE1-223ENST00000475146 AHSA1O95433 338 aa21.28■■□□□ 1
CPNE1-223ENST00000475146 OPN1SWP03999 348 aa21.28■■□□□ 1
CPNE1-223ENST00000475146 HTR2AP28223 471 aa21.28■■□□□ 1
CPNE1-223ENST00000475146 ADSLP30566 484 aaPredicted RBP21.28■■□□□ 1
CPNE1-223ENST00000475146 ART1P52961 327 aa21.28■■□□□ 1
CPNE1-223ENST00000475146 PCBP3P57721 371 aaKnown RBP21.28■■□□□ 1
CPNE1-223ENST00000475146 DMTNQ08495 405 aa21.28■■□□□ 1
CPNE1-223ENST00000475146 C1orf140Q5VVS0 124 aa21.28■■□□□ 1
CPNE1-223ENST00000475146 NANOGP8Q6NSW7 305 aa21.28■■□□□ 1
CPNE1-223ENST00000475146 Q6ZT83 130 aa21.28■■□□□ 1
CPNE1-223ENST00000475146 SLC30A8Q8IWU4 369 aa21.28■■□□□ 1
CPNE1-223ENST00000475146 APH1AQ96BI3 265 aa21.28■■□□□ 1
CPNE1-223ENST00000475146 SH3GL1Q99961 368 aa21.28■■□□□ 1
CPNE1-223ENST00000475146 TRIM2Q9C040 744 aa21.28■■□□□ 1
CPNE1-223ENST00000475146 NANOGQ9H9S0 305 aa21.28■■□□□ 1
CPNE1-223ENST00000475146 ARMCX1Q9P291 453 aa21.28■■□□□ 1
CPNE1-223ENST00000475146 FREM1Q5H8C1 2179 aa21.28■■□□□ 1
CPNE1-223ENST00000475146 A0A1B0GWA3 101 aa21.27■■□□□ 1
CPNE1-223ENST00000475146 FXYD1O00168 92 aa21.27■■□□□ 1
CPNE1-223ENST00000475146 IGHV3-9P01782 118 aa21.27■■□□□ 1
CPNE1-223ENST00000475146 PCGF2P35227 344 aa21.27■■□□□ 1
CPNE1-223ENST00000475146 ITGADQ13349 1161 aa21.27■■□□□ 1
CPNE1-223ENST00000475146 RABL3Q5HYI8 236 aa21.27■■□□□ 1
CPNE1-223ENST00000475146 CASP12Q6UXS9 341 aa21.27■■□□□ 1
CPNE1-223ENST00000475146 UBE2J2Q8N2K1 259 aa21.27■■□□□ 1
CPNE1-223ENST00000475146 TMEM99Q8N816 258 aa21.27■■□□□ 1
CPNE1-223ENST00000475146 RNF217Q8TC41 542 aa21.27■■□□□ 1
CPNE1-223ENST00000475146 STK35Q8TDR2 534 aa21.27■■□□□ 1
CPNE1-223ENST00000475146 PRR14Q9BWN1 585 aa21.27■■□□□ 1
CPNE1-223ENST00000475146 SELENONQ9NZV5 590 aa21.27■■□□□ 1
CPNE1-223ENST00000475146 M0QX08 132 aa21.26■□□□□ 0.99
CPNE1-223ENST00000475146 MRPL33O75394 65 aaKnown RBP21.26■□□□□ 0.99
CPNE1-223ENST00000475146 LYZL6O75951 148 aa21.26■□□□□ 0.99
CPNE1-223ENST00000475146 RAF1P04049 648 aa21.26■□□□□ 0.99
CPNE1-223ENST00000475146 KEAP1Q14145 624 aa21.26■□□□□ 0.99
CPNE1-223ENST00000475146 BEX5Q5H9J7 111 aa21.26■□□□□ 0.99
CPNE1-223ENST00000475146 ALG10BQ5I7T1 473 aa21.26■□□□□ 0.99
CPNE1-223ENST00000475146 INTS11Q5TA45 600 aaKnown RBP21.26■□□□□ 0.99
CPNE1-223ENST00000475146 BHLHA15Q7RTS1 189 aaPredicted RBP21.26■□□□□ 0.99
CPNE1-223ENST00000475146 RANBP3LQ86VV4 465 aaPredicted RBP21.26■□□□□ 0.99
CPNE1-223ENST00000475146 LSMEM1Q8N8F7 131 aa21.26■□□□□ 0.99
CPNE1-223ENST00000475146 PCYOX1LQ8NBM8 494 aa21.26■□□□□ 0.99
CPNE1-223ENST00000475146 OR8J3Q8NGG0 315 aa21.26■□□□□ 0.99
CPNE1-223ENST00000475146 DNAJA4Q8WW22 397 aaPredicted RBP21.26■□□□□ 0.99
CPNE1-223ENST00000475146 ECSITQ9BQ95 431 aa21.26■□□□□ 0.99
CPNE1-223ENST00000475146 TMEM27Q9HBJ8 222 aa21.26■□□□□ 0.99
CPNE1-223ENST00000475146 SLC9A8Q9Y2E8 581 aa21.26■□□□□ 0.99
CPNE1-223ENST00000475146 FLVCR1Q9Y5Y0 555 aa21.26■□□□□ 0.99
CPNE1-223ENST00000475146 TACC2O95359 2948 aa21.25■□□□□ 0.99
CPNE1-223ENST00000475146 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP21.25■□□□□ 0.99
CPNE1-223ENST00000475146 AQP7P3A6NL99 342 aa21.25■□□□□ 0.99
CPNE1-223ENST00000475146 SLC22A2O15244 555 aa21.25■□□□□ 0.99
CPNE1-223ENST00000475146 NPIPB7O75200 414 aa21.25■□□□□ 0.99
CPNE1-223ENST00000475146 CNOT4O95628 575 aaKnown RBP21.25■□□□□ 0.99
CPNE1-223ENST00000475146 NPPAP01160 153 aa21.25■□□□□ 0.99
CPNE1-223ENST00000475146 GTF2E2P29084 291 aaKnown RBP21.25■□□□□ 0.99
CPNE1-223ENST00000475146 SLC17A1Q14916 467 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms