RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 TESQ9UGI8 421 aaKnown RBP16.82■□□□□ 0.28
PTCD3-210ENST00000473829 IGKV3D-15A0A087WSY6 115 aa16.81■□□□□ 0.28
PTCD3-210ENST00000473829 LIPT2A6NK58 231 aa16.81■□□□□ 0.28
PTCD3-210ENST00000473829 ZNF724A8MTY0 619 aa16.81■□□□□ 0.28
PTCD3-210ENST00000473829 A8MVM7 634 aa16.81■□□□□ 0.28
PTCD3-210ENST00000473829 AIM2O14862 343 aa16.81■□□□□ 0.28
PTCD3-210ENST00000473829 LGI1O95970 557 aa16.81■□□□□ 0.28
PTCD3-210ENST00000473829 IDUAP35475 653 aa16.81■□□□□ 0.28
PTCD3-210ENST00000473829 EGR4Q05215 589 aa16.81■□□□□ 0.28
PTCD3-210ENST00000473829 CEACAM7Q14002 265 aa16.81■□□□□ 0.28
PTCD3-210ENST00000473829 DAZAP2Q15038 168 aaPredicted RBP16.81■□□□□ 0.28
PTCD3-210ENST00000473829 NPTX1Q15818 432 aa16.81■□□□□ 0.28
PTCD3-210ENST00000473829 STAC2Q6ZMT1 411 aa16.81■□□□□ 0.28
PTCD3-210ENST00000473829 CCDC80Q76M96 950 aa16.81■□□□□ 0.28
PTCD3-210ENST00000473829 PATL1Q86TB9 770 aaKnown RBP16.81■□□□□ 0.28
PTCD3-210ENST00000473829 BHLHE22Q8NFJ8 381 aaPredicted RBP16.81■□□□□ 0.28
PTCD3-210ENST00000473829 OR52E4Q8NGH9 312 aa16.81■□□□□ 0.28
PTCD3-210ENST00000473829 ZHX1-C8orf76Q96EF9 292 aa16.81■□□□□ 0.28
PTCD3-210ENST00000473829 DACH2Q96NX9 599 aa16.81■□□□□ 0.28
PTCD3-210ENST00000473829 WFIKKN1Q96NZ8 548 aa16.81■□□□□ 0.28
PTCD3-210ENST00000473829 TACO1Q9BSH4 297 aaKnown RBP16.81■□□□□ 0.28
PTCD3-210ENST00000473829 KLHL4Q9C0H6 718 aa16.81■□□□□ 0.28
PTCD3-210ENST00000473829 CMTM6Q9NX76 183 aa16.81■□□□□ 0.28
PTCD3-210ENST00000473829 KLHL28Q9NXS3 571 aa16.81■□□□□ 0.28
PTCD3-210ENST00000473829 FAM220BPB1ANY3 271 aa16.8■□□□□ 0.28
PTCD3-210ENST00000473829 C16orf97H3BN30 126 aa16.8■□□□□ 0.28
PTCD3-210ENST00000473829 NTF4P34130 210 aa16.8■□□□□ 0.28
PTCD3-210ENST00000473829 SLC35A1P78382 337 aa16.8■□□□□ 0.28
PTCD3-210ENST00000473829 PDK3Q15120 406 aa16.8■□□□□ 0.28
PTCD3-210ENST00000473829 OR7A5Q15622 319 aa16.8■□□□□ 0.28
PTCD3-210ENST00000473829 NRF1Q16656 503 aa16.8■□□□□ 0.28
PTCD3-210ENST00000473829 INTS11Q5TA45 600 aaKnown RBP16.8■□□□□ 0.28
PTCD3-210ENST00000473829 C1orf140Q5VVS0 124 aa16.8■□□□□ 0.28
PTCD3-210ENST00000473829 ANKRD34AQ69YU3 496 aa16.8■□□□□ 0.28
PTCD3-210ENST00000473829 C8orf82Q6P1X6 216 aaPredicted RBP16.8■□□□□ 0.28
PTCD3-210ENST00000473829 BEND4Q6ZU67 534 aa16.8■□□□□ 0.28
PTCD3-210ENST00000473829 RBM45Q8IUH3 476 aaKnown RBP16.8■□□□□ 0.28
PTCD3-210ENST00000473829 GABRG1Q8N1C3 465 aa16.8■□□□□ 0.28
PTCD3-210ENST00000473829 PIGXQ8TBF5 258 aa16.8■□□□□ 0.28
PTCD3-210ENST00000473829 NRGNQ92686 78 aa16.8■□□□□ 0.28
PTCD3-210ENST00000473829 PTDSS2Q9BVG9 487 aa16.8■□□□□ 0.28
PTCD3-210ENST00000473829 TRIM2Q9C040 744 aa16.8■□□□□ 0.28
PTCD3-210ENST00000473829 RASSF1Q9NS23 344 aa16.8■□□□□ 0.28
PTCD3-210ENST00000473829 RPS6KB2Q9UBS0 482 aa16.8■□□□□ 0.28
PTCD3-210ENST00000473829 PRSS50Q9UI38 385 aa16.8■□□□□ 0.28
PTCD3-210ENST00000473829 SLC13A4Q9UKG4 626 aa16.8■□□□□ 0.28
PTCD3-210ENST00000473829 AKAP9Q99996 3911 aa16.79■□□□□ 0.28
PTCD3-210ENST00000473829 IGKV1D-42A0A075B6H8 117 aa16.79■□□□□ 0.28
PTCD3-210ENST00000473829 ELOA3DA6NLF2 546 aaPredicted RBP16.79■□□□□ 0.28
PTCD3-210ENST00000473829 SIAH2O43255 324 aa16.79■□□□□ 0.28
PTCD3-210ENST00000473829 AKR7A3O95154 331 aa16.79■□□□□ 0.28
PTCD3-210ENST00000473829 GPIP06744 558 aa16.79■□□□□ 0.28
PTCD3-210ENST00000473829 OR3A2P47893 321 aa16.79■□□□□ 0.28
PTCD3-210ENST00000473829 SLC16A1P53985 500 aa16.79■□□□□ 0.28
PTCD3-210ENST00000473829 NCALDP61601 193 aa16.79■□□□□ 0.28
PTCD3-210ENST00000473829 OR1Q1Q15612 314 aa16.79■□□□□ 0.28
PTCD3-210ENST00000473829 ELOA3BQ3SY89 546 aa16.79■□□□□ 0.28
PTCD3-210ENST00000473829 ALG10BQ5I7T1 473 aa16.79■□□□□ 0.28
PTCD3-210ENST00000473829 PAQR6Q6TCH4 344 aa16.79■□□□□ 0.28
PTCD3-210ENST00000473829 STK32CQ86UX6 486 aa16.79■□□□□ 0.28
PTCD3-210ENST00000473829 TSPYL5Q86VY4 417 aaPredicted RBP16.79■□□□□ 0.28
PTCD3-210ENST00000473829 SLC15A3Q8IY34 581 aa16.79■□□□□ 0.28
PTCD3-210ENST00000473829 TMEM99Q8N816 258 aa16.79■□□□□ 0.28
PTCD3-210ENST00000473829 ELOA3Q8NG57 546 aa16.79■□□□□ 0.28
PTCD3-210ENST00000473829 OR6T1Q8NGN1 323 aa16.79■□□□□ 0.28
PTCD3-210ENST00000473829 VANGL1Q8TAA9 524 aaPredicted RBP16.79■□□□□ 0.28
PTCD3-210ENST00000473829 STK35Q8TDR2 534 aa16.79■□□□□ 0.28
PTCD3-210ENST00000473829 KTI12Q96EK9 354 aaPredicted RBP16.79■□□□□ 0.28
PTCD3-210ENST00000473829 C12orf10Q9HB07 376 aa16.79■□□□□ 0.28
PTCD3-210ENST00000473829 A0A0B4J2E0 115 aa16.78■□□□□ 0.28
PTCD3-210ENST00000473829 A0A1B0GX12 115 aa16.78■□□□□ 0.28
PTCD3-210ENST00000473829 FTCDNL1E5RQL4 147 aa16.78■□□□□ 0.28
PTCD3-210ENST00000473829 EIF1BO60739 113 aaKnown RBP16.78■□□□□ 0.28
PTCD3-210ENST00000473829 C8BP07358 591 aa16.78■□□□□ 0.28
PTCD3-210ENST00000473829 PTNP21246 168 aa16.78■□□□□ 0.28
PTCD3-210ENST00000473829 P2RY4P51582 365 aa16.78■□□□□ 0.28
PTCD3-210ENST00000473829 VEZF1Q14119 521 aa16.78■□□□□ 0.28
PTCD3-210ENST00000473829 POU4F3Q15319 338 aa16.78■□□□□ 0.28
PTCD3-210ENST00000473829 TSC22D1Q15714 1073 aa16.78■□□□□ 0.28
PTCD3-210ENST00000473829 OTUD3Q5T2D3 398 aaPredicted RBP16.78■□□□□ 0.28
PTCD3-210ENST00000473829 ERICH5Q6P6B1 374 aa16.78■□□□□ 0.28
PTCD3-210ENST00000473829 PIGWQ7Z7B1 504 aa16.78■□□□□ 0.28
PTCD3-210ENST00000473829 GALNT5Q7Z7M9 940 aa16.78■□□□□ 0.28
PTCD3-210ENST00000473829 CXorf67Q86X51 503 aaPredicted RBP16.78■□□□□ 0.28
PTCD3-210ENST00000473829 P3H2Q8IVL5 708 aa16.78■□□□□ 0.28
PTCD3-210ENST00000473829 OR2T12Q8NG77 320 aa16.78■□□□□ 0.28
PTCD3-210ENST00000473829 MED18Q9BUE0 208 aa16.78■□□□□ 0.28
PTCD3-210ENST00000473829 POLDIP3Q9BY77 421 aaKnown RBP16.78■□□□□ 0.28
PTCD3-210ENST00000473829 CLEC4MQ9H2X3 399 aaPredicted RBP16.78■□□□□ 0.28
PTCD3-210ENST00000473829 ADPRHL2Q9NX46 363 aa16.78■□□□□ 0.28
PTCD3-210ENST00000473829 NDRG3Q9UGV2 375 aa16.78■□□□□ 0.28
PTCD3-210ENST00000473829 ANKRD17O75179 2603 aaKnown RBP16.77■□□□□ 0.28
PTCD3-210ENST00000473829 AQP7P3A6NL99 342 aa16.77■□□□□ 0.28
PTCD3-210ENST00000473829 NME4O00746 187 aa16.77■□□□□ 0.28
PTCD3-210ENST00000473829 AHSA1O95433 338 aa16.77■□□□□ 0.28
PTCD3-210ENST00000473829 THBDP07204 575 aa16.77■□□□□ 0.28
PTCD3-210ENST00000473829 TNFRSF1BP20333 461 aa16.77■□□□□ 0.28
PTCD3-210ENST00000473829 RPS5P46782 204 aaKnown RBP16.77■□□□□ 0.28
PTCD3-210ENST00000473829 NUDT2P50583 147 aa16.77■□□□□ 0.28
PTCD3-210ENST00000473829 SLC7A2P52569 658 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms