RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 GPR45Q9Y5Y3 372 aa12.02□□□□□ -0.49
HMGN1-211ENST00000471260 SPIN1Q9Y657 262 aaPredicted RBP12.02□□□□□ -0.49
HMGN1-211ENST00000471260 VPS13CQ709C8 3753 aa12.01□□□□□ -0.49
HMGN1-211ENST00000471260 CCDC154A6NI56 674 aa12.01□□□□□ -0.49
HMGN1-211ENST00000471260 HMGN4O00479 90 aa12.01□□□□□ -0.49
HMGN1-211ENST00000471260 ARHGEF9O43307 516 aa12.01□□□□□ -0.49
HMGN1-211ENST00000471260 TMCC2O75069 709 aa12.01□□□□□ -0.49
HMGN1-211ENST00000471260 CYP7B1O75881 506 aa12.01□□□□□ -0.49
HMGN1-211ENST00000471260 LOXP28300 417 aaPredicted RBP12.01□□□□□ -0.49
HMGN1-211ENST00000471260 CLK1P49759 484 aaKnown RBP12.01□□□□□ -0.49
HMGN1-211ENST00000471260 RNF144AP50876 292 aaPredicted RBP12.01□□□□□ -0.49
HMGN1-211ENST00000471260 CSNK2A1P68400 391 aaPredicted RBP12.01□□□□□ -0.49
HMGN1-211ENST00000471260 KCNJ10P78508 379 aa12.01□□□□□ -0.49
HMGN1-211ENST00000471260 P2RY6Q15077 328 aa12.01□□□□□ -0.49
HMGN1-211ENST00000471260 MAPK14Q16539 360 aa12.01□□□□□ -0.49
HMGN1-211ENST00000471260 GPAT3Q53EU6 434 aa12.01□□□□□ -0.49
HMGN1-211ENST00000471260 FOXB2Q5VYV0 432 aa12.01□□□□□ -0.49
HMGN1-211ENST00000471260 ANKRD34AQ69YU3 496 aa12.01□□□□□ -0.49
HMGN1-211ENST00000471260 TFAP2EQ6VUC0 442 aa12.01□□□□□ -0.49
HMGN1-211ENST00000471260 TMPPEQ6ZT21 453 aa12.01□□□□□ -0.49
HMGN1-211ENST00000471260 C22orf34Q6ZV56 151 aa12.01□□□□□ -0.49
HMGN1-211ENST00000471260 PLEKHM3Q6ZWE6 761 aa12.01□□□□□ -0.49
HMGN1-211ENST00000471260 SSX8Q7RTT4 187 aa12.01□□□□□ -0.49
HMGN1-211ENST00000471260 GRINAQ7Z429 371 aa12.01□□□□□ -0.49
HMGN1-211ENST00000471260 SPATA24Q86W54 205 aa12.01□□□□□ -0.49
HMGN1-211ENST00000471260 TUSC5Q8IXB3 177 aa12.01□□□□□ -0.49
HMGN1-211ENST00000471260 GABRG1Q8N1C3 465 aa12.01□□□□□ -0.49
HMGN1-211ENST00000471260 HIPK4Q8NE63 616 aa12.01□□□□□ -0.49
HMGN1-211ENST00000471260 ATP6V1C2Q8NEY4 427 aa12.01□□□□□ -0.49
HMGN1-211ENST00000471260 RAB8BQ92930 207 aa12.01□□□□□ -0.49
HMGN1-211ENST00000471260 ZNF524Q96C55 264 aa12.01□□□□□ -0.49
HMGN1-211ENST00000471260 ACTR6Q9GZN1 396 aa12.01□□□□□ -0.49
HMGN1-211ENST00000471260 DLL4Q9NR61 685 aa12.01□□□□□ -0.49
HMGN1-211ENST00000471260 SDR39U1Q9NRG7 319 aaPredicted RBP12.01□□□□□ -0.49
HMGN1-211ENST00000471260 PTTG2Q9NZH5 202 aa12.01□□□□□ -0.49
HMGN1-211ENST00000471260 AP4S1Q9Y587 144 aa12.01□□□□□ -0.49
HMGN1-211ENST00000471260 HRNRQ86YZ3 2850 aaPredicted RBP12.01□□□□□ -0.49
HMGN1-211ENST00000471260 CENPVL1A0A0U1RR11 272 aa12□□□□□ -0.49
HMGN1-211ENST00000471260 A0A1W2PNR3 127 aa12□□□□□ -0.49
HMGN1-211ENST00000471260 ZNF724A8MTY0 619 aa12□□□□□ -0.49
HMGN1-211ENST00000471260 FBP2O00757 339 aa12□□□□□ -0.49
HMGN1-211ENST00000471260 KLF4O43474 513 aa12□□□□□ -0.49
HMGN1-211ENST00000471260 CYTIPO60759 359 aa12□□□□□ -0.49
HMGN1-211ENST00000471260 SMPD2O60906 423 aa12□□□□□ -0.49
HMGN1-211ENST00000471260 GCM2O75603 506 aaPredicted RBP12□□□□□ -0.49
HMGN1-211ENST00000471260 H6PDO95479 791 aa12□□□□□ -0.49
HMGN1-211ENST00000471260 CNOT4O95628 575 aaKnown RBP12□□□□□ -0.49
HMGN1-211ENST00000471260 KRT75O95678 551 aa12□□□□□ -0.49
HMGN1-211ENST00000471260 NPPAP01160 153 aa12□□□□□ -0.49
HMGN1-211ENST00000471260 THBDP07204 575 aa12□□□□□ -0.49
HMGN1-211ENST00000471260 ZCCHC18P0CG32 403 aa12□□□□□ -0.49
HMGN1-211ENST00000471260 SMIM18P0DKX4 95 aa12□□□□□ -0.49
HMGN1-211ENST00000471260 ENPP1P22413 925 aa12□□□□□ -0.49
HMGN1-211ENST00000471260 IL12AP29459 219 aa12□□□□□ -0.49
HMGN1-211ENST00000471260 HTR3AP46098 478 aa12□□□□□ -0.49
HMGN1-211ENST00000471260 MAP2K6P52564 334 aa12□□□□□ -0.49
HMGN1-211ENST00000471260 CASP9P55211 416 aa12□□□□□ -0.49
HMGN1-211ENST00000471260 NKX6-1P78426 367 aaPredicted RBP12□□□□□ -0.49
HMGN1-211ENST00000471260 MS4A2Q01362 244 aa12□□□□□ -0.49
HMGN1-211ENST00000471260 FUT5Q11128 374 aa12□□□□□ -0.49
HMGN1-211ENST00000471260 MERTKQ12866 999 aa12□□□□□ -0.49
HMGN1-211ENST00000471260 APOFQ13790 326 aa12□□□□□ -0.49
HMGN1-211ENST00000471260 GNA13Q14344 377 aa12□□□□□ -0.49
HMGN1-211ENST00000471260 PDCD4Q53EL6 469 aaKnown RBP12□□□□□ -0.49
HMGN1-211ENST00000471260 SYT14P1Q58G82 188 aa12□□□□□ -0.49
HMGN1-211ENST00000471260 SFRP5Q5T4F7 317 aa12□□□□□ -0.49
HMGN1-211ENST00000471260 LCN8Q6JVE9 175 aa12□□□□□ -0.49
HMGN1-211ENST00000471260 PRSS57Q6UWY2 283 aa12□□□□□ -0.49
HMGN1-211ENST00000471260 ZNF621Q6ZSS3 439 aa12□□□□□ -0.49
HMGN1-211ENST00000471260 RNF130Q86XS8 419 aa12□□□□□ -0.49
HMGN1-211ENST00000471260 ANKFN1Q8N957 763 aa12□□□□□ -0.49
HMGN1-211ENST00000471260 ZNF563Q8TA94 476 aa12□□□□□ -0.49
HMGN1-211ENST00000471260 OR5B2Q96R09 309 aa12□□□□□ -0.49
HMGN1-211ENST00000471260 PSD2Q9BQI7 771 aa12□□□□□ -0.49
HMGN1-211ENST00000471260 C12orf49Q9H741 205 aa12□□□□□ -0.49
HMGN1-211ENST00000471260 MTHFD2LQ9H903 347 aaPredicted RBP12□□□□□ -0.49
HMGN1-211ENST00000471260 NGBQ9NPG2 151 aa12□□□□□ -0.49
HMGN1-211ENST00000471260 ZIM2Q9NZV7 527 aa12□□□□□ -0.49
HMGN1-211ENST00000471260 HDGFL3Q9Y3E1 203 aa12□□□□□ -0.49
HMGN1-211ENST00000471260 MTORP42345 2549 aa11.99□□□□□ -0.49
HMGN1-211ENST00000471260 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.99□□□□□ -0.49
HMGN1-211ENST00000471260 AGAP5A6NIR3 686 aa11.99□□□□□ -0.49
HMGN1-211ENST00000471260 SULT2B1O00204 365 aa11.99□□□□□ -0.49
HMGN1-211ENST00000471260 ANGPT2O15123 496 aa11.99□□□□□ -0.49
HMGN1-211ENST00000471260 DNPH1O43598 174 aa11.99□□□□□ -0.49
HMGN1-211ENST00000471260 SLC22A3O75751 556 aa11.99□□□□□ -0.49
HMGN1-211ENST00000471260 GPIP06744 558 aa11.99□□□□□ -0.49
HMGN1-211ENST00000471260 BMP2P12643 396 aa11.99□□□□□ -0.49
HMGN1-211ENST00000471260 DIO1P49895 249 aa11.99□□□□□ -0.49
HMGN1-211ENST00000471260 NME5P56597 212 aa11.99□□□□□ -0.49
HMGN1-211ENST00000471260 CHRNEQ04844 493 aa11.99□□□□□ -0.49
HMGN1-211ENST00000471260 RASGEF1BQ0VAM2 473 aa11.99□□□□□ -0.49
HMGN1-211ENST00000471260 ITGADQ13349 1161 aa11.99□□□□□ -0.49
HMGN1-211ENST00000471260 LRRC36Q1X8D7 754 aa11.99□□□□□ -0.49
HMGN1-211ENST00000471260 CNPY1Q3B7I2 92 aa11.99□□□□□ -0.49
HMGN1-211ENST00000471260 C6orf10Q5SRN2 563 aa11.99□□□□□ -0.49
HMGN1-211ENST00000471260 INTS11Q5TA45 600 aaKnown RBP11.99□□□□□ -0.49
HMGN1-211ENST00000471260 MSANTD1Q6ZTZ1 278 aa11.99□□□□□ -0.49
HMGN1-211ENST00000471260 NUFIP2Q7Z417 695 aaKnown RBP11.99□□□□□ -0.49
HMGN1-211ENST00000471260 P3H2Q8IVL5 708 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms