RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 GRHL2Q6ISB3 625 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 TRIM40Q6P9F5 258 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 SLC27A1Q6PCB7 646 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 TMEM88Q6PEY1 159 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 TSSK4Q6SA08 328 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 SPNS3Q6ZMD2 512 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 TMEM91Q6ZNR0 172 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 SLC29A4Q7RTT9 530 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 CAMKMTQ7Z624 323 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 LDB1Q86U70 411 aaPredicted RBP4.49□□□□□ -1.69
SF3B1-207ENST00000468925 ZNF546Q86UE3 836 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 GLCCI1Q86VQ1 547 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 AMIGO3Q86WK7 504 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 CIR1Q86X95 450 aaPredicted RBP4.49□□□□□ -1.69
SF3B1-207ENST00000468925 CBLN2Q8IUK8 224 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 PGBD5Q8N414 524 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 SAMD12Q8N8I0 201 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 LMNTD1Q8N9Z9 388 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 ZNF383Q8NA42 475 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 PNLDC1Q8NA58 520 aaKnown RBP4.49□□□□□ -1.69
SF3B1-207ENST00000468925 POGLUT1Q8NBL1 392 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 INO80EQ8NBZ0 244 aaPredicted RBP4.49□□□□□ -1.69
SF3B1-207ENST00000468925 OR52I1Q8NGK6 324 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 OR1J2Q8NGS2 313 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 OR4Q3Q8NH05 313 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 GOT1L1Q8NHS2 421 aaPredicted RBP4.49□□□□□ -1.69
SF3B1-207ENST00000468925 BBS10Q8TAM1 723 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 SPPL3Q8TCT6 385 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 SPPL2AQ8TCT8 520 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 CD99L2Q8TCZ2 262 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 RNASEH2CQ8TDP1 164 aaKnown RBP4.49□□□□□ -1.69
SF3B1-207ENST00000468925 DTD1Q8TEA8 209 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 C2CD4CQ8TF44 421 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 UBTD2Q8WUN7 234 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 THEM6Q8WUY1 208 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 FCAMRQ8WWV6 532 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 CORO2AQ92828 525 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 MR1Q95460 341 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 HIST1H2BAQ96A08 127 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 CMBLQ96DG6 245 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 MYEOVQ96EZ4 313 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 LRIG1Q96JA1 1093 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 OR5B2Q96R09 309 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 KCNA7Q96RP8 456 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 NPY6RQ99463 290 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 TEAD3Q99594 435 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 MAP3K3Q99759 626 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 FICDQ9BVA6 458 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 PINK1Q9BXM7 581 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 DPH1Q9BZG8 443 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 FXYD6Q9H0Q3 95 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 OPN3Q9H1Y3 402 aaPredicted RBP4.49□□□□□ -1.69
SF3B1-207ENST00000468925 MS4A5Q9H3V2 200 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 TMEM38AQ9H6F2 299 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 ZNF552Q9H707 407 aaPredicted RBP4.49□□□□□ -1.69
SF3B1-207ENST00000468925 NT5MQ9NPB1 228 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 EXOSC3Q9NQT5 275 aaKnown RBP4.49□□□□□ -1.69
SF3B1-207ENST00000468925 PLSCR4Q9NRQ2 329 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 TFCP2L1Q9NZI6 479 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 FLRT1Q9NZU1 646 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 RCC2Q9P258 522 aaKnown RBP4.49□□□□□ -1.69
SF3B1-207ENST00000468925 PTGFRNQ9P2B2 879 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 GULP1Q9UBP9 304 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 ZNF107Q9UII5 783 aaPredicted RBP4.49□□□□□ -1.69
SF3B1-207ENST00000468925 MBD1Q9UIS9 605 aaPredicted RBP4.49□□□□□ -1.69
SF3B1-207ENST00000468925 SLC13A4Q9UKG4 626 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 FZD4Q9ULV1 537 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 AKT3Q9Y243 479 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 ANGPT4Q9Y264 503 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 SLC35A3Q9Y2D2 325 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 SLC9A8Q9Y2E8 581 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 ATG4BQ9Y4P1 393 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 TIMM10BQ9Y5J6 103 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 IRAK3Q9Y616 596 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 TRIP11Q15643 1979 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.49□□□□□ -1.69
SF3B1-207ENST00000468925 NRXN2Q9P2S2 1712 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 TSC2P49815 1807 aa4.49□□□□□ -1.69
SF3B1-207ENST00000468925 A0A087WUJ7 227 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 NCF1BA6NI72 391 aaPredicted RBP4.48□□□□□ -1.69
SF3B1-207ENST00000468925 C9JVG2 144 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 ZNF587BE7ETH6 402 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 RPL36A-HNRNPH2H7BZ11 118 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 DDX39AO00148 427 aaKnown RBP4.48□□□□□ -1.69
SF3B1-207ENST00000468925 GTPBP1O00178 669 aaKnown RBP4.48□□□□□ -1.69
SF3B1-207ENST00000468925 TAAR5O14804 337 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 PPP1R2P9O14990 202 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 FFAR2O15552 330 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 DLEU1O43261 78 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 SYT7O43581 403 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 SEMA7AO75326 666 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 MED6O75586 246 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 TOXO94900 526 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 SIX6O95475 246 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 GCGP01275 180 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 GBAP04062 536 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 ATP1B1P05026 303 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 FGF1P05230 155 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 RHOP08100 348 aa4.48□□□□□ -1.69
SF3B1-207ENST00000468925 CSF1P09603 554 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms