RNA–Protein interactions for RNA: ENST00000465238.5

COL7A1-205, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-205ENST00000465238 OSGIN1Q9UJX0 560 aa15.85■□□□□ 0.13
COL7A1-205ENST00000465238 TMED7Q9Y3B3 224 aa15.85■□□□□ 0.13
COL7A1-205ENST00000465238 NAV3Q8IVL0 2385 aa15.85■□□□□ 0.13
COL7A1-205ENST00000465238 SLC22A20A6NK97 555 aa15.84■□□□□ 0.13
COL7A1-205ENST00000465238 CXCL13O43927 109 aa15.84■□□□□ 0.13
COL7A1-205ENST00000465238 SYNGR4O95473 234 aa15.84■□□□□ 0.13
COL7A1-205ENST00000465238 FESP07332 822 aa15.84■□□□□ 0.13
COL7A1-205ENST00000465238 SHC1P29353 583 aa15.84■□□□□ 0.13
COL7A1-205ENST00000465238 MAP2K6P52564 334 aa15.84■□□□□ 0.13
COL7A1-205ENST00000465238 KEAP1Q14145 624 aa15.84■□□□□ 0.13
COL7A1-205ENST00000465238 CTU2Q2VPK5 515 aaKnown RBP15.84■□□□□ 0.13
COL7A1-205ENST00000465238 CYBRD1Q53TN4 286 aa15.84■□□□□ 0.13
COL7A1-205ENST00000465238 PPP4R4Q6NUP7 873 aa15.84■□□□□ 0.13
COL7A1-205ENST00000465238 GCNT2Q8N0V5 402 aa15.84■□□□□ 0.13
COL7A1-205ENST00000465238 RBM15BQ8NDT2 890 aaKnown RBP15.84■□□□□ 0.13
COL7A1-205ENST00000465238 ZNF845Q96IR2 970 aaPredicted RBP15.84■□□□□ 0.13
COL7A1-205ENST00000465238 ADGRG7Q96K78 797 aa15.84■□□□□ 0.13
COL7A1-205ENST00000465238 OR5B2Q96R09 309 aa15.84■□□□□ 0.13
COL7A1-205ENST00000465238 ARHGDIGQ99819 225 aa15.84■□□□□ 0.13
COL7A1-205ENST00000465238 PLEKHF2Q9H8W4 249 aa15.84■□□□□ 0.13
COL7A1-205ENST00000465238 TMEM27Q9HBJ8 222 aa15.84■□□□□ 0.13
COL7A1-205ENST00000465238 ADPRHL2Q9NX46 363 aa15.84■□□□□ 0.13
COL7A1-205ENST00000465238 SELENONQ9NZV5 590 aa15.84■□□□□ 0.13
COL7A1-205ENST00000465238 PACSIN3Q9UKS6 424 aa15.84■□□□□ 0.13
COL7A1-205ENST00000465238 SLC9A8Q9Y2E8 581 aa15.84■□□□□ 0.13
COL7A1-205ENST00000465238 ZNF175Q9Y473 711 aa15.84■□□□□ 0.13
COL7A1-205ENST00000465238 VPS13CQ709C8 3753 aa15.83■□□□□ 0.13
COL7A1-205ENST00000465238 M0R3H8 397 aa15.83■□□□□ 0.12
COL7A1-205ENST00000465238 UBOX5O94941 541 aa15.83■□□□□ 0.12
COL7A1-205ENST00000465238 ATE1O95260 518 aa15.83■□□□□ 0.12
COL7A1-205ENST00000465238 CRHP06850 196 aa15.83■□□□□ 0.12
COL7A1-205ENST00000465238 TCN1P20061 433 aaPredicted RBP15.83■□□□□ 0.12
COL7A1-205ENST00000465238 CPOXP36551 454 aa15.83■□□□□ 0.12
COL7A1-205ENST00000465238 CLK1P49759 484 aaKnown RBP15.83■□□□□ 0.12
COL7A1-205ENST00000465238 CRYBA2P53672 197 aa15.83■□□□□ 0.12
COL7A1-205ENST00000465238 FOXD4Q12950 439 aaPredicted RBP15.83■□□□□ 0.12
COL7A1-205ENST00000465238 PON3Q15166 354 aa15.83■□□□□ 0.12
COL7A1-205ENST00000465238 NRF1Q16656 503 aa15.83■□□□□ 0.12
COL7A1-205ENST00000465238 SPATS1Q496A3 300 aa15.83■□□□□ 0.12
COL7A1-205ENST00000465238 SYT14P1Q58G82 188 aa15.83■□□□□ 0.12
COL7A1-205ENST00000465238 OR2A2Q6IF42 318 aa15.83■□□□□ 0.12
COL7A1-205ENST00000465238 PLXDC2Q6UX71 529 aa15.83■□□□□ 0.12
COL7A1-205ENST00000465238 RINLQ6ZS11 566 aa15.83■□□□□ 0.12
COL7A1-205ENST00000465238 LSMEM1Q8N8F7 131 aa15.83■□□□□ 0.12
COL7A1-205ENST00000465238 VANGL1Q8TAA9 524 aaPredicted RBP15.83■□□□□ 0.12
COL7A1-205ENST00000465238 LZICQ8WZA0 190 aa15.83■□□□□ 0.12
COL7A1-205ENST00000465238 FAM162AQ96A26 154 aa15.83■□□□□ 0.12
COL7A1-205ENST00000465238 C3orf49Q96BT1 292 aa15.83■□□□□ 0.12
COL7A1-205ENST00000465238 DDIT4LQ96D03 193 aa15.83■□□□□ 0.12
COL7A1-205ENST00000465238 TPD52L3Q96J77 140 aa15.83■□□□□ 0.12
COL7A1-205ENST00000465238 MCHR1Q99705 422 aa15.83■□□□□ 0.12
COL7A1-205ENST00000465238 PRR14Q9BWN1 585 aa15.83■□□□□ 0.12
COL7A1-205ENST00000465238 EGFL7Q9UHF1 273 aa15.83■□□□□ 0.12
COL7A1-205ENST00000465238 MCTS1Q9ULC4 181 aaKnown RBP15.83■□□□□ 0.12
COL7A1-205ENST00000465238 SH3GLB1Q9Y371 365 aa15.83■□□□□ 0.12
COL7A1-205ENST00000465238 A0A1W2PNR3 127 aa15.82■□□□□ 0.12
COL7A1-205ENST00000465238 TMEM72A0PK05 275 aa15.82■□□□□ 0.12
COL7A1-205ENST00000465238 SH3D21A4FU49 640 aa15.82■□□□□ 0.12
COL7A1-205ENST00000465238 A8MXE2 369 aa15.82■□□□□ 0.12
COL7A1-205ENST00000465238 ZNF208O43345 1280 aa15.82■□□□□ 0.12
COL7A1-205ENST00000465238 TNFSF13O75888 250 aa15.82■□□□□ 0.12
COL7A1-205ENST00000465238 HRGP04196 525 aa15.82■□□□□ 0.12
COL7A1-205ENST00000465238 HSD17B1P14061 328 aa15.82■□□□□ 0.12
COL7A1-205ENST00000465238 FOSL1P15407 271 aa15.82■□□□□ 0.12
COL7A1-205ENST00000465238 NCK1P16333 377 aa15.82■□□□□ 0.12
COL7A1-205ENST00000465238 GGT1P19440 569 aa15.82■□□□□ 0.12
COL7A1-205ENST00000465238 HTR2AP28223 471 aa15.82■□□□□ 0.12
COL7A1-205ENST00000465238 SELENOWP63302 87 aa15.82■□□□□ 0.12
COL7A1-205ENST00000465238 ADAM8P78325 824 aa15.82■□□□□ 0.12
COL7A1-205ENST00000465238 OR1Q1Q15612 314 aa15.82■□□□□ 0.12
COL7A1-205ENST00000465238 DEFB113Q30KQ7 82 aa15.82■□□□□ 0.12
COL7A1-205ENST00000465238 GLYATQ6IB77 296 aa15.82■□□□□ 0.12
COL7A1-205ENST00000465238 OR6T1Q8NGN1 323 aa15.82■□□□□ 0.12
COL7A1-205ENST00000465238 FNDC9Q8TBE3 224 aa15.82■□□□□ 0.12
COL7A1-205ENST00000465238 RNF217Q8TC41 542 aa15.82■□□□□ 0.12
COL7A1-205ENST00000465238 DNAJA4Q8WW22 397 aaPredicted RBP15.82■□□□□ 0.12
COL7A1-205ENST00000465238 POM121Q96HA1 1249 aa15.82■□□□□ 0.12
COL7A1-205ENST00000465238 WFDC6Q9BQY6 131 aa15.82■□□□□ 0.12
COL7A1-205ENST00000465238 CD300AQ9UGN4 299 aa15.82■□□□□ 0.12
COL7A1-205ENST00000465238 NDRG3Q9UGV2 375 aa15.82■□□□□ 0.12
COL7A1-205ENST00000465238 A0A1B0GWA3 101 aa15.81■□□□□ 0.12
COL7A1-205ENST00000465238 A0A1W2PNV4 684 aa15.81■□□□□ 0.12
COL7A1-205ENST00000465238 ELOA3DA6NLF2 546 aaPredicted RBP15.81■□□□□ 0.12
COL7A1-205ENST00000465238 SULT2B1O00204 365 aa15.81■□□□□ 0.12
COL7A1-205ENST00000465238 MSTNO14793 375 aa15.81■□□□□ 0.12
COL7A1-205ENST00000465238 CASKO14936 926 aa15.81■□□□□ 0.12
COL7A1-205ENST00000465238 FMO6PO60774 539 aa15.81■□□□□ 0.12
COL7A1-205ENST00000465238 ZNF682O95780 498 aa15.81■□□□□ 0.12
COL7A1-205ENST00000465238 TGM6O95932 706 aa15.81■□□□□ 0.12
COL7A1-205ENST00000465238 FCGR2AP12318 317 aa15.81■□□□□ 0.12
COL7A1-205ENST00000465238 PCYT1AP49585 367 aa15.81■□□□□ 0.12
COL7A1-205ENST00000465238 RAC3P60763 192 aa15.81■□□□□ 0.12
COL7A1-205ENST00000465238 CSNK2A1P68400 391 aaPredicted RBP15.81■□□□□ 0.12
COL7A1-205ENST00000465238 ELOA3BQ3SY89 546 aa15.81■□□□□ 0.12
COL7A1-205ENST00000465238 ULK3Q6PHR2 472 aa15.81■□□□□ 0.12
COL7A1-205ENST00000465238 TMPPEQ6ZT21 453 aa15.81■□□□□ 0.12
COL7A1-205ENST00000465238 ATG4DQ86TL0 474 aaPredicted RBP15.81■□□□□ 0.12
COL7A1-205ENST00000465238 CARM1Q86X55 608 aa15.81■□□□□ 0.12
COL7A1-205ENST00000465238 ARHGAP24Q8N264 748 aa15.81■□□□□ 0.12
COL7A1-205ENST00000465238 FAM156AQ8NDB6 213 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms