RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 TSPEARQ8WU66 669 aa7.02□□□□□ -1.29
CDC42BPA-210ENST00000462553 THUMPD3Q9BV44 507 aaKnown RBP7.02□□□□□ -1.29
CDC42BPA-210ENST00000462553 CCDC106Q9BWC9 280 aa7.02□□□□□ -1.29
CDC42BPA-210ENST00000462553 SLCO5A1Q9H2Y9 848 aa7.02□□□□□ -1.29
CDC42BPA-210ENST00000462553 RABEP2Q9H5N1 569 aa7.02□□□□□ -1.29
CDC42BPA-210ENST00000462553 C12orf49Q9H741 205 aa7.02□□□□□ -1.29
CDC42BPA-210ENST00000462553 MTHFD2LQ9H903 347 aaPredicted RBP7.02□□□□□ -1.29
CDC42BPA-210ENST00000462553 BCL2L10Q9HD36 194 aa7.02□□□□□ -1.29
CDC42BPA-210ENST00000462553 SAR1AQ9NR31 198 aa7.02□□□□□ -1.29
CDC42BPA-210ENST00000462553 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.02□□□□□ -1.29
CDC42BPA-210ENST00000462553 RLIMQ9NVW2 624 aa7.02□□□□□ -1.29
CDC42BPA-210ENST00000462553 MCTS1Q9ULC4 181 aaKnown RBP7.02□□□□□ -1.29
CDC42BPA-210ENST00000462553 TRIM33Q9UPN9 1127 aa7.02□□□□□ -1.29
CDC42BPA-210ENST00000462553 ZNF443Q9Y2A4 671 aaPredicted RBP7.02□□□□□ -1.29
CDC42BPA-210ENST00000462553 GPR52Q9Y2T5 361 aa7.02□□□□□ -1.29
CDC42BPA-210ENST00000462553 A0A1W2PNR3 127 aa7.01□□□□□ -1.29
CDC42BPA-210ENST00000462553 CDHR4A6H8M9 788 aa7.01□□□□□ -1.29
CDC42BPA-210ENST00000462553 FAAHO00519 579 aa7.01□□□□□ -1.29
CDC42BPA-210ENST00000462553 GPR37O15354 613 aa7.01□□□□□ -1.29
CDC42BPA-210ENST00000462553 CD5LO43866 347 aa7.01□□□□□ -1.29
CDC42BPA-210ENST00000462553 NDUFS7O75251 213 aa7.01□□□□□ -1.29
CDC42BPA-210ENST00000462553 CD8AP01732 235 aa7.01□□□□□ -1.29
CDC42BPA-210ENST00000462553 GPX2P18283 190 aa7.01□□□□□ -1.29
CDC42BPA-210ENST00000462553 PPIBP23284 216 aaKnown RBP7.01□□□□□ -1.29
CDC42BPA-210ENST00000462553 EDNRAP25101 427 aa7.01□□□□□ -1.29
CDC42BPA-210ENST00000462553 ACVR1BP36896 505 aa7.01□□□□□ -1.29
CDC42BPA-210ENST00000462553 ACAA2P42765 397 aaKnown RBP7.01□□□□□ -1.29
CDC42BPA-210ENST00000462553 MTPNP58546 118 aa7.01□□□□□ -1.29
CDC42BPA-210ENST00000462553 EPS8Q12929 822 aa7.01□□□□□ -1.29
CDC42BPA-210ENST00000462553 KLF10Q13118 480 aa7.01□□□□□ -1.29
CDC42BPA-210ENST00000462553 TAB1Q15750 504 aa7.01□□□□□ -1.29
CDC42BPA-210ENST00000462553 ETFDHQ16134 617 aa7.01□□□□□ -1.29
CDC42BPA-210ENST00000462553 PGGHGQ32M88 737 aa7.01□□□□□ -1.29
CDC42BPA-210ENST00000462553 ZNF672Q499Z4 452 aaPredicted RBP7.01□□□□□ -1.29
CDC42BPA-210ENST00000462553 LIN52Q52LA3 116 aa7.01□□□□□ -1.29
CDC42BPA-210ENST00000462553 GCNT6Q5T4J0 391 aa7.01□□□□□ -1.29
CDC42BPA-210ENST00000462553 HBMQ6B0K9 141 aa7.01□□□□□ -1.29
CDC42BPA-210ENST00000462553 C3orf33Q6P1S2 294 aa7.01□□□□□ -1.29
CDC42BPA-210ENST00000462553 ESPNLQ6ZVH7 1005 aa7.01□□□□□ -1.29
CDC42BPA-210ENST00000462553 NUFIP2Q7Z417 695 aaKnown RBP7.01□□□□□ -1.29
CDC42BPA-210ENST00000462553 NET1Q7Z628 596 aaPredicted RBP7.01□□□□□ -1.29
CDC42BPA-210ENST00000462553 PEX5LQ8IYB4 626 aa7.01□□□□□ -1.29
CDC42BPA-210ENST00000462553 LILRA2Q8N149 483 aa7.01□□□□□ -1.29
CDC42BPA-210ENST00000462553 CLIP4Q8N3C7 705 aa7.01□□□□□ -1.29
CDC42BPA-210ENST00000462553 OR52P1PQ8NH57 321 aa7.01□□□□□ -1.29
CDC42BPA-210ENST00000462553 NFKBIDQ8NI38 313 aa7.01□□□□□ -1.29
CDC42BPA-210ENST00000462553 BBS10Q8TAM1 723 aa7.01□□□□□ -1.29
CDC42BPA-210ENST00000462553 ABHD3Q8WU67 409 aa7.01□□□□□ -1.29
CDC42BPA-210ENST00000462553 PMM1Q92871 262 aa7.01□□□□□ -1.29
CDC42BPA-210ENST00000462553 FBXW5Q969U6 566 aa7.01□□□□□ -1.29
CDC42BPA-210ENST00000462553 ANKRD27Q96NW4 1050 aa7.01□□□□□ -1.29
CDC42BPA-210ENST00000462553 CGREF1Q99674 301 aa7.01□□□□□ -1.29
CDC42BPA-210ENST00000462553 REG4Q9BYZ8 158 aa7.01□□□□□ -1.29
CDC42BPA-210ENST00000462553 PRRG4Q9BZD6 226 aa7.01□□□□□ -1.29
CDC42BPA-210ENST00000462553 RAD21L1Q9H4I0 556 aa7.01□□□□□ -1.29
CDC42BPA-210ENST00000462553 TMEM38AQ9H6F2 299 aa7.01□□□□□ -1.29
CDC42BPA-210ENST00000462553 CTPS2Q9NRF8 586 aa7.01□□□□□ -1.29
CDC42BPA-210ENST00000462553 GLRX2Q9NS18 164 aa7.01□□□□□ -1.29
CDC42BPA-210ENST00000462553 THUMPD1Q9NXG2 353 aaKnown RBP7.01□□□□□ -1.29
CDC42BPA-210ENST00000462553 PAQR5Q9NXK6 330 aaPredicted RBP7.01□□□□□ -1.29
CDC42BPA-210ENST00000462553 CALML5Q9NZT1 146 aa7.01□□□□□ -1.29
CDC42BPA-210ENST00000462553 KLHL14Q9P2G3 628 aa7.01□□□□□ -1.29
CDC42BPA-210ENST00000462553 KLHL13Q9P2N7 655 aa7.01□□□□□ -1.29
CDC42BPA-210ENST00000462553 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.01□□□□□ -1.29
CDC42BPA-210ENST00000462553 ING1Q9UK53 422 aaPredicted RBP7.01□□□□□ -1.29
CDC42BPA-210ENST00000462553 RNF115Q9Y4L5 304 aa7.01□□□□□ -1.29
CDC42BPA-210ENST00000462553 A0A0G2JPF8 293 aa7□□□□□ -1.29
CDC42BPA-210ENST00000462553 RNF212BA8MTL3 300 aa7□□□□□ -1.29
CDC42BPA-210ENST00000462553 HNRNPCL2B2RXH8 293 aa7□□□□□ -1.29
CDC42BPA-210ENST00000462553 HNRNPCL3B7ZW38 293 aa7□□□□□ -1.29
CDC42BPA-210ENST00000462553 CLOCKO15516 846 aa7□□□□□ -1.29
CDC42BPA-210ENST00000462553 FRS3O43559 492 aa7□□□□□ -1.29
CDC42BPA-210ENST00000462553 TLX2O43763 284 aaPredicted RBP7□□□□□ -1.29
CDC42BPA-210ENST00000462553 HNRNPCL1O60812 293 aaKnown RBP7□□□□□ -1.29
CDC42BPA-210ENST00000462553 PGM3O95394 542 aa7□□□□□ -1.29
CDC42BPA-210ENST00000462553 SYNGR4O95473 234 aa7□□□□□ -1.29
CDC42BPA-210ENST00000462553 CD3EP07766 207 aa7□□□□□ -1.29
CDC42BPA-210ENST00000462553 PABPC4LP0CB38 370 aaKnown RBP7□□□□□ -1.29
CDC42BPA-210ENST00000462553 GKN3PP0CG01 181 aa7□□□□□ -1.29
CDC42BPA-210ENST00000462553 HNRNPCL4P0DMR1 293 aa7□□□□□ -1.29
CDC42BPA-210ENST00000462553 PRG2P13727 222 aa7□□□□□ -1.29
CDC42BPA-210ENST00000462553 IL7RP16871 459 aa7□□□□□ -1.29
CDC42BPA-210ENST00000462553 ME2P23368 584 aa7□□□□□ -1.29
CDC42BPA-210ENST00000462553 RYKP34925 604 aa7□□□□□ -1.29
CDC42BPA-210ENST00000462553 IDH2P48735 452 aaKnown RBP7□□□□□ -1.29
CDC42BPA-210ENST00000462553 GZMMP51124 257 aa7□□□□□ -1.29
CDC42BPA-210ENST00000462553 PCBP3P57721 371 aaKnown RBP7□□□□□ -1.29
CDC42BPA-210ENST00000462553 CDK6Q00534 326 aa7□□□□□ -1.29
CDC42BPA-210ENST00000462553 BSPH1Q075Z2 132 aa7□□□□□ -1.29
CDC42BPA-210ENST00000462553 MERTKQ12866 999 aa7□□□□□ -1.29
CDC42BPA-210ENST00000462553 TRMT5Q32P41 509 aaKnown RBP7□□□□□ -1.29
CDC42BPA-210ENST00000462553 TMEM176BQ3YBM2 270 aaPredicted RBP7□□□□□ -1.29
CDC42BPA-210ENST00000462553 GLIPR1L2Q4G1C9 344 aa7□□□□□ -1.29
CDC42BPA-210ENST00000462553 SYT14P1Q58G82 188 aa7□□□□□ -1.29
CDC42BPA-210ENST00000462553 SFRP5Q5T4F7 317 aa7□□□□□ -1.29
CDC42BPA-210ENST00000462553 REP15Q6BDI9 236 aa7□□□□□ -1.29
CDC42BPA-210ENST00000462553 ABLIM2Q6H8Q1 611 aa7□□□□□ -1.29
CDC42BPA-210ENST00000462553 HMBOX1Q6NT76 420 aa7□□□□□ -1.29
CDC42BPA-210ENST00000462553 GRINAQ7Z429 371 aa7□□□□□ -1.29
CDC42BPA-210ENST00000462553 ADGRG3Q86Y34 549 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms