RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 SPATS1Q496A3 300 aa5.46□□□□□ -1.54
SMARCC1-204ENST00000462198 SLC9B1Q4ZJI4 515 aa5.46□□□□□ -1.54
SMARCC1-204ENST00000462198 RFTN2Q52LD8 501 aaPredicted RBP5.46□□□□□ -1.54
SMARCC1-204ENST00000462198 XKR7Q5GH72 579 aa5.46□□□□□ -1.54
SMARCC1-204ENST00000462198 TEX30Q5JUR7 227 aa5.46□□□□□ -1.54
SMARCC1-204ENST00000462198 C6orf136Q5SQH8 315 aa5.46□□□□□ -1.54
SMARCC1-204ENST00000462198 HES5Q5TA89 166 aa5.46□□□□□ -1.54
SMARCC1-204ENST00000462198 PXDC1Q5TGL8 231 aa5.46□□□□□ -1.54
SMARCC1-204ENST00000462198 EEF1A1P5Q5VTE0 462 aa5.46□□□□□ -1.54
SMARCC1-204ENST00000462198 AADACL4Q5VUY2 407 aa5.46□□□□□ -1.54
SMARCC1-204ENST00000462198 C18orf63Q68DL7 685 aa5.46□□□□□ -1.54
SMARCC1-204ENST00000462198 NOXRED1Q6NXP6 359 aa5.46□□□□□ -1.54
SMARCC1-204ENST00000462198 GALNT18Q6P9A2 607 aa5.46□□□□□ -1.54
SMARCC1-204ENST00000462198 QSOX2Q6ZRP7 698 aa5.46□□□□□ -1.54
SMARCC1-204ENST00000462198 Q6ZSR9 355 aa5.46□□□□□ -1.54
SMARCC1-204ENST00000462198 CPEB2Q7Z5Q1 589 aaKnown RBP5.46□□□□□ -1.54
SMARCC1-204ENST00000462198 PLCZ1Q86YW0 608 aa5.46□□□□□ -1.54
SMARCC1-204ENST00000462198 SIAH3Q8IW03 269 aa5.46□□□□□ -1.54
SMARCC1-204ENST00000462198 CCDC36Q8IYA8 594 aa5.46□□□□□ -1.54
SMARCC1-204ENST00000462198 ZNF595Q8IYB9 648 aa5.46□□□□□ -1.54
SMARCC1-204ENST00000462198 TMEM132CQ8N3T6 1108 aa5.46□□□□□ -1.54
SMARCC1-204ENST00000462198 DPP10Q8N608 796 aa5.46□□□□□ -1.54
SMARCC1-204ENST00000462198 AMER2Q8N7J2 671 aa5.46□□□□□ -1.54
SMARCC1-204ENST00000462198 PLPP5Q8NEB5 264 aa5.46□□□□□ -1.54
SMARCC1-204ENST00000462198 BHLHE22Q8NFJ8 381 aaPredicted RBP5.46□□□□□ -1.54
SMARCC1-204ENST00000462198 OR10Q1Q8NGQ4 319 aa5.46□□□□□ -1.54
SMARCC1-204ENST00000462198 FAM57AQ8TBR7 257 aa5.46□□□□□ -1.54
SMARCC1-204ENST00000462198 TM4SF18Q96CE8 201 aa5.46□□□□□ -1.54
SMARCC1-204ENST00000462198 C3orf30Q96M34 536 aa5.46□□□□□ -1.54
SMARCC1-204ENST00000462198 OR52B2Q96RD2 323 aa5.46□□□□□ -1.54
SMARCC1-204ENST00000462198 CSF3RQ99062 836 aa5.46□□□□□ -1.54
SMARCC1-204ENST00000462198 KRTAP17-1Q9BYP8 105 aa5.46□□□□□ -1.54
SMARCC1-204ENST00000462198 VN1R1Q9GZP7 353 aa5.46□□□□□ -1.54
SMARCC1-204ENST00000462198 AKTIPQ9H8T0 292 aa5.46□□□□□ -1.54
SMARCC1-204ENST00000462198 PLEKHF2Q9H8W4 249 aa5.46□□□□□ -1.54
SMARCC1-204ENST00000462198 LIN28AQ9H9Z2 209 aaKnown RBP5.46□□□□□ -1.54
SMARCC1-204ENST00000462198 EFCAB1Q9HAE3 211 aa5.46□□□□□ -1.54
SMARCC1-204ENST00000462198 CXorf21Q9HAI6 301 aa5.46□□□□□ -1.54
SMARCC1-204ENST00000462198 MIEF1Q9NQG6 463 aa5.46□□□□□ -1.54
SMARCC1-204ENST00000462198 SACM1LQ9NTJ5 587 aa5.46□□□□□ -1.54
SMARCC1-204ENST00000462198 TEX10Q9NXF1 929 aaPredicted RBP5.46□□□□□ -1.54
SMARCC1-204ENST00000462198 GIMAP2Q9UG22 337 aa5.46□□□□□ -1.54
SMARCC1-204ENST00000462198 ZNF229Q9UJW7 825 aa5.46□□□□□ -1.54
SMARCC1-204ENST00000462198 DLGAP4Q9Y2H0 992 aa5.46□□□□□ -1.54
SMARCC1-204ENST00000462198 MMACHCQ9Y4U1 282 aa5.46□□□□□ -1.54
SMARCC1-204ENST00000462198 RNF114Q9Y508 228 aa5.46□□□□□ -1.54
SMARCC1-204ENST00000462198 X6R8D5 127 aa5.46□□□□□ -1.54
SMARCC1-204ENST00000462198 ANK2Q01484 3957 aa5.46□□□□□ -1.54
SMARCC1-204ENST00000462198 LOC102723996A0A087X1L8 192 aa5.45□□□□□ -1.54
SMARCC1-204ENST00000462198 IGHV1-45A0A0A0MS14 117 aa5.45□□□□□ -1.54
SMARCC1-204ENST00000462198 IGHV3-20A0A0C4DH32 117 aa5.45□□□□□ -1.54
SMARCC1-204ENST00000462198 A0A1B0GTH9 108 aa5.45□□□□□ -1.54
SMARCC1-204ENST00000462198 LOC390937A0A1W2PQ73 354 aa5.45□□□□□ -1.54
SMARCC1-204ENST00000462198 TMEM82A0PJX8 343 aa5.45□□□□□ -1.54
SMARCC1-204ENST00000462198 PQLC2LA1A4F0 135 aa5.45□□□□□ -1.54
SMARCC1-204ENST00000462198 LINC00862A6NCI5 91 aa5.45□□□□□ -1.54
SMARCC1-204ENST00000462198 ASPDHA6ND91 283 aa5.45□□□□□ -1.54
SMARCC1-204ENST00000462198 SYNDIG1LA6NDD5 238 aa5.45□□□□□ -1.54
SMARCC1-204ENST00000462198 SAC3D1A6NKF1 404 aa5.45□□□□□ -1.54
SMARCC1-204ENST00000462198 C12orf71A8MTZ7 269 aa5.45□□□□□ -1.54
SMARCC1-204ENST00000462198 AIM2O14862 343 aa5.45□□□□□ -1.54
SMARCC1-204ENST00000462198 ANGPT2O15123 496 aa5.45□□□□□ -1.54
SMARCC1-204ENST00000462198 FGF17O60258 216 aa5.45□□□□□ -1.54
SMARCC1-204ENST00000462198 OR10H2O60403 315 aa5.45□□□□□ -1.54
SMARCC1-204ENST00000462198 GMDSO60547 372 aa5.45□□□□□ -1.54
SMARCC1-204ENST00000462198 ERAL1O75616 437 aaKnown RBP5.45□□□□□ -1.54
SMARCC1-204ENST00000462198 SEC14L2O76054 403 aa5.45□□□□□ -1.54
SMARCC1-204ENST00000462198 APOL3O95236 402 aa5.45□□□□□ -1.54
SMARCC1-204ENST00000462198 IL3P08700 152 aa5.45□□□□□ -1.54
SMARCC1-204ENST00000462198 ITGAMP11215 1152 aa5.45□□□□□ -1.54
SMARCC1-204ENST00000462198 COX6A1P12074 109 aa5.45□□□□□ -1.54
SMARCC1-204ENST00000462198 BMP7P18075 431 aa5.45□□□□□ -1.54
SMARCC1-204ENST00000462198 LBPP18428 481 aa5.45□□□□□ -1.54
SMARCC1-204ENST00000462198 NCF2P19878 526 aaPredicted RBP5.45□□□□□ -1.54
SMARCC1-204ENST00000462198 ERP29P30040 261 aaKnown RBP5.45□□□□□ -1.54
SMARCC1-204ENST00000462198 NUDT2P50583 147 aa5.45□□□□□ -1.54
SMARCC1-204ENST00000462198 NKX2-5P52952 324 aaPredicted RBP5.45□□□□□ -1.54
SMARCC1-204ENST00000462198 NME5P56597 212 aa5.45□□□□□ -1.54
SMARCC1-204ENST00000462198 OR4D2P58180 307 aa5.45□□□□□ -1.54
SMARCC1-204ENST00000462198 DEFA1P59665 94 aa5.45□□□□□ -1.54
SMARCC1-204ENST00000462198 DEFA3P59666 94 aa5.45□□□□□ -1.54
SMARCC1-204ENST00000462198 CSNK2BP67870 215 aa5.45□□□□□ -1.54
SMARCC1-204ENST00000462198 ID2Q02363 134 aa5.45□□□□□ -1.54
SMARCC1-204ENST00000462198 C2orf80Q0P641 193 aa5.45□□□□□ -1.54
SMARCC1-204ENST00000462198 BNIP2Q12982 314 aa5.45□□□□□ -1.54
SMARCC1-204ENST00000462198 SNTA1Q13424 505 aa5.45□□□□□ -1.54
SMARCC1-204ENST00000462198 SERTAD2Q14140 314 aa5.45□□□□□ -1.54
SMARCC1-204ENST00000462198 HEPACAMQ14CZ8 416 aa5.45□□□□□ -1.54
SMARCC1-204ENST00000462198 DAZAP2Q15038 168 aaPredicted RBP5.45□□□□□ -1.54
SMARCC1-204ENST00000462198 KIAA0040Q15053 153 aa5.45□□□□□ -1.54
SMARCC1-204ENST00000462198 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.45□□□□□ -1.54
SMARCC1-204ENST00000462198 PGS1Q32NB8 556 aa5.45□□□□□ -1.54
SMARCC1-204ENST00000462198 KRTAP24-1Q3LI83 254 aa5.45□□□□□ -1.54
SMARCC1-204ENST00000462198 SLC36A3Q495N2 470 aa5.45□□□□□ -1.54
SMARCC1-204ENST00000462198 YIF1BQ5BJH7 314 aa5.45□□□□□ -1.54
SMARCC1-204ENST00000462198 AGAP6Q5VW22 663 aa5.45□□□□□ -1.54
SMARCC1-204ENST00000462198 MBNL2Q5VZF2 373 aaKnown RBP5.45□□□□□ -1.54
SMARCC1-204ENST00000462198 ELP2Q6IA86 826 aa5.45□□□□□ -1.54
SMARCC1-204ENST00000462198 TMEM205Q6UW68 189 aa5.45□□□□□ -1.54
SMARCC1-204ENST00000462198 PRSS57Q6UWY2 283 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms