RNA–Protein interactions for RNA: ENST00000452226.5

PDLIM2-214, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2

Gene PDLIM2, Length 845 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-214ENST00000452226 TAB1Q15750 504 aa16.31■□□□□ 0.2
PDLIM2-214ENST00000452226 C3orf33Q6P1S2 294 aa16.31■□□□□ 0.2
PDLIM2-214ENST00000452226 GRINAQ7Z429 371 aa16.31■□□□□ 0.2
PDLIM2-214ENST00000452226 ADGRG3Q86Y34 549 aa16.31■□□□□ 0.2
PDLIM2-214ENST00000452226 CLIP4Q8N3C7 705 aa16.31■□□□□ 0.2
PDLIM2-214ENST00000452226 ZNF563Q8TA94 476 aa16.31■□□□□ 0.2
PDLIM2-214ENST00000452226 HSD17B8Q92506 261 aa16.31■□□□□ 0.2
PDLIM2-214ENST00000452226 KISS1RQ969F8 398 aaPredicted RBP16.31■□□□□ 0.2
PDLIM2-214ENST00000452226 SPATA9Q9BWV2 254 aa16.31■□□□□ 0.2
PDLIM2-214ENST00000452226 RSPO3Q9BXY4 272 aaPredicted RBP16.31■□□□□ 0.2
PDLIM2-214ENST00000452226 BCO1Q9HAY6 547 aa16.31■□□□□ 0.2
PDLIM2-214ENST00000452226 NGBQ9NPG2 151 aa16.31■□□□□ 0.2
PDLIM2-214ENST00000452226 CTPS2Q9NRF8 586 aa16.31■□□□□ 0.2
PDLIM2-214ENST00000452226 SERINC1Q9NRX5 453 aa16.31■□□□□ 0.2
PDLIM2-214ENST00000452226 ING1Q9UK53 422 aaPredicted RBP16.31■□□□□ 0.2
PDLIM2-214ENST00000452226 ZNF232Q9UNY5 417 aa16.31■□□□□ 0.2
PDLIM2-214ENST00000452226 CFAP73A6NFT4 308 aa16.3■□□□□ 0.2
PDLIM2-214ENST00000452226 ZNF814B7Z6K7 855 aa16.3■□□□□ 0.2
PDLIM2-214ENST00000452226 SLC1A3P43003 542 aa16.3■□□□□ 0.2
PDLIM2-214ENST00000452226 OR3A2P47893 321 aa16.3■□□□□ 0.2
PDLIM2-214ENST00000452226 RASGEF1BQ0VAM2 473 aa16.3■□□□□ 0.2
PDLIM2-214ENST00000452226 ITGADQ13349 1161 aa16.3■□□□□ 0.2
PDLIM2-214ENST00000452226 CAPRIN1Q14444 709 aaKnown RBP16.3■□□□□ 0.2
PDLIM2-214ENST00000452226 COQ5Q5HYK3 327 aa16.3■□□□□ 0.2
PDLIM2-214ENST00000452226 REEP3Q6NUK4 255 aa16.3■□□□□ 0.2
PDLIM2-214ENST00000452226 NFKBIDQ8NI38 313 aa16.3■□□□□ 0.2
PDLIM2-214ENST00000452226 SLC25A43Q8WUT9 341 aaPredicted RBP16.3■□□□□ 0.2
PDLIM2-214ENST00000452226 ZNF775Q96BV0 537 aaPredicted RBP16.3■□□□□ 0.2
PDLIM2-214ENST00000452226 PSD2Q9BQI7 771 aa16.3■□□□□ 0.2
PDLIM2-214ENST00000452226 ADAM19Q9H013 955 aa16.3■□□□□ 0.2
PDLIM2-214ENST00000452226 ESRP2Q9H6T0 727 aaKnown RBP16.3■□□□□ 0.2
PDLIM2-214ENST00000452226 CHRNA9Q9UGM1 479 aa16.3■□□□□ 0.2
PDLIM2-214ENST00000452226 LAMP3Q9UQV4 416 aa16.3■□□□□ 0.2
PDLIM2-214ENST00000452226 RNF115Q9Y4L5 304 aa16.3■□□□□ 0.2
PDLIM2-214ENST00000452226 PLCE1Q9P212 2302 aa16.3■□□□□ 0.2
PDLIM2-214ENST00000452226 C5orf58C9J3I9 102 aa16.29■□□□□ 0.2
PDLIM2-214ENST00000452226 SMAD9O15198 467 aaKnown RBP16.29■□□□□ 0.2
PDLIM2-214ENST00000452226 CLOCKO15516 846 aa16.29■□□□□ 0.2
PDLIM2-214ENST00000452226 CYTIPO60759 359 aa16.29■□□□□ 0.2
PDLIM2-214ENST00000452226 FKBP2P26885 142 aaKnown RBP16.29■□□□□ 0.2
PDLIM2-214ENST00000452226 PCSK6P29122 969 aa16.29■□□□□ 0.2
PDLIM2-214ENST00000452226 HTR3AP46098 478 aa16.29■□□□□ 0.2
PDLIM2-214ENST00000452226 ATP5J2P56134 94 aa16.29■□□□□ 0.2
PDLIM2-214ENST00000452226 NFYCQ13952 458 aa16.29■□□□□ 0.2
PDLIM2-214ENST00000452226 SELPLGQ14242 412 aa16.29■□□□□ 0.2
PDLIM2-214ENST00000452226 SYT14P1Q58G82 188 aa16.29■□□□□ 0.2
PDLIM2-214ENST00000452226 ZNF311Q5JNZ3 666 aa16.29■□□□□ 0.2
PDLIM2-214ENST00000452226 NCMAPQ5T1S8 102 aa16.29■□□□□ 0.2
PDLIM2-214ENST00000452226 ADAM5Q6NVV9 412 aa16.29■□□□□ 0.2
PDLIM2-214ENST00000452226 Q6ZT83 130 aa16.29■□□□□ 0.2
PDLIM2-214ENST00000452226 BHLHA15Q7RTS1 189 aaPredicted RBP16.29■□□□□ 0.2
PDLIM2-214ENST00000452226 PTOV1Q86YD1 416 aa16.29■□□□□ 0.2
PDLIM2-214ENST00000452226 LILRB1Q8NHL6 650 aaPredicted RBP16.29■□□□□ 0.2
PDLIM2-214ENST00000452226 SLC35B4Q969S0 331 aa16.29■□□□□ 0.2
PDLIM2-214ENST00000452226 USB1Q9BQ65 265 aaKnown RBP16.29■□□□□ 0.2
PDLIM2-214ENST00000452226 ARMC7Q9H6L4 198 aa16.29■□□□□ 0.2
PDLIM2-214ENST00000452226 KAT8Q9H7Z6 458 aaKnown RBP16.29■□□□□ 0.2
PDLIM2-214ENST00000452226 SONP18583 2426 aaKnown RBP16.28■□□□□ 0.2
PDLIM2-214ENST00000452226 SLC22A2O15244 555 aa16.28■□□□□ 0.2
PDLIM2-214ENST00000452226 CD3EP07766 207 aa16.28■□□□□ 0.2
PDLIM2-214ENST00000452226 GKN3PP0CG01 181 aa16.28■□□□□ 0.2
PDLIM2-214ENST00000452226 SLC6A2P23975 617 aa16.28■□□□□ 0.2
PDLIM2-214ENST00000452226 CLK1P49759 484 aaKnown RBP16.28■□□□□ 0.2
PDLIM2-214ENST00000452226 MTPNP58546 118 aa16.28■□□□□ 0.2
PDLIM2-214ENST00000452226 SCARB2Q14108 478 aa16.28■□□□□ 0.2
PDLIM2-214ENST00000452226 TRMT5Q32P41 509 aaKnown RBP16.28■□□□□ 0.2
PDLIM2-214ENST00000452226 TMPPEQ6ZT21 453 aa16.28■□□□□ 0.2
PDLIM2-214ENST00000452226 NET1Q7Z628 596 aaPredicted RBP16.28■□□□□ 0.2
PDLIM2-214ENST00000452226 ZNF300Q96RE9 604 aaPredicted RBP16.28■□□□□ 0.2
PDLIM2-214ENST00000452226 POTEKPQ9BYX7 375 aa16.28■□□□□ 0.2
PDLIM2-214ENST00000452226 PRSS50Q9UI38 385 aa16.28■□□□□ 0.2
PDLIM2-214ENST00000452226 OSGIN1Q9UJX0 560 aa16.28■□□□□ 0.2
PDLIM2-214ENST00000452226 SPIN1Q9Y657 262 aaPredicted RBP16.28■□□□□ 0.2
PDLIM2-214ENST00000452226 TMED7-TICAM2A0A0A6YYA0 188 aa16.27■□□□□ 0.2
PDLIM2-214ENST00000452226 ZNF724A8MTY0 619 aa16.27■□□□□ 0.2
PDLIM2-214ENST00000452226 BBIP1A8MTZ0 92 aa16.27■□□□□ 0.2
PDLIM2-214ENST00000452226 FXYD1O00168 92 aa16.27■□□□□ 0.2
PDLIM2-214ENST00000452226 SULT2B1O00204 365 aa16.27■□□□□ 0.2
PDLIM2-214ENST00000452226 LYZL6O75951 148 aa16.27■□□□□ 0.2
PDLIM2-214ENST00000452226 NPPAP01160 153 aa16.27■□□□□ 0.2
PDLIM2-214ENST00000452226 FESP07332 822 aa16.27■□□□□ 0.2
PDLIM2-214ENST00000452226 PRG2P13727 222 aa16.27■□□□□ 0.2
PDLIM2-214ENST00000452226 UQCRBP14927 111 aa16.27■□□□□ 0.2
PDLIM2-214ENST00000452226 EDNRAP25101 427 aa16.27■□□□□ 0.2
PDLIM2-214ENST00000452226 PRKAR1BP31321 381 aa16.27■□□□□ 0.2
PDLIM2-214ENST00000452226 DIO1P49895 249 aa16.27■□□□□ 0.2
PDLIM2-214ENST00000452226 GZMMP51124 257 aa16.27■□□□□ 0.2
PDLIM2-214ENST00000452226 POLR2HP52434 150 aaKnown RBP16.27■□□□□ 0.2
PDLIM2-214ENST00000452226 MAP2K6P52564 334 aa16.27■□□□□ 0.2
PDLIM2-214ENST00000452226 RPS4XP62701 263 aaKnown RBP16.27■□□□□ 0.2
PDLIM2-214ENST00000452226 RBBP4Q09028 425 aa16.27■□□□□ 0.2
PDLIM2-214ENST00000452226 MAPRE2Q15555 327 aa16.27■□□□□ 0.2
PDLIM2-214ENST00000452226 NANOGP8Q6NSW7 305 aa16.27■□□□□ 0.2
PDLIM2-214ENST00000452226 DHRS4L2Q6PKH6 230 aa16.27■□□□□ 0.2
PDLIM2-214ENST00000452226 ATG4DQ86TL0 474 aaPredicted RBP16.27■□□□□ 0.2
PDLIM2-214ENST00000452226 HIPK4Q8NE63 616 aa16.27■□□□□ 0.2
PDLIM2-214ENST00000452226 FBXW5Q969U6 566 aa16.27■□□□□ 0.2
PDLIM2-214ENST00000452226 ARL5BQ96KC2 179 aa16.27■□□□□ 0.2
PDLIM2-214ENST00000452226 NANOGQ9H9S0 305 aa16.27■□□□□ 0.2
PDLIM2-214ENST00000452226 CACYBPQ9HB71 228 aaKnown RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms