RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 SLC41A3Q96GZ6 507 aa11.71□□□□□ -0.53
VPS33A-202ENST00000451053 ZNF845Q96IR2 970 aaPredicted RBP11.71□□□□□ -0.53
VPS33A-202ENST00000451053 ARL5BQ96KC2 179 aa11.71□□□□□ -0.53
VPS33A-202ENST00000451053 OR5B2Q96R09 309 aa11.71□□□□□ -0.53
VPS33A-202ENST00000451053 TP63Q9H3D4 680 aaPredicted RBP11.71□□□□□ -0.53
VPS33A-202ENST00000451053 COQ10BQ9H8M1 238 aa11.71□□□□□ -0.53
VPS33A-202ENST00000451053 NMNAT1Q9HAN9 279 aaPredicted RBP11.71□□□□□ -0.53
VPS33A-202ENST00000451053 NTN4Q9HB63 628 aa11.71□□□□□ -0.53
VPS33A-202ENST00000451053 SLC7A7Q9UM01 511 aa11.71□□□□□ -0.53
VPS33A-202ENST00000451053 OAZ3Q9UMX2 235 aa11.71□□□□□ -0.53
VPS33A-202ENST00000451053 FAM215AQ9Y5M1 114 aa11.71□□□□□ -0.53
VPS33A-202ENST00000451053 LYVE1Q9Y5Y7 322 aa11.71□□□□□ -0.53
VPS33A-202ENST00000451053 SPIN1Q9Y657 262 aaPredicted RBP11.71□□□□□ -0.53
VPS33A-202ENST00000451053 ZGRF1Q86YA3 2104 aa11.71□□□□□ -0.54
VPS33A-202ENST00000451053 IGKV1D-42A0A075B6H8 117 aa11.7□□□□□ -0.54
VPS33A-202ENST00000451053 A0A1W2PNR3 127 aa11.7□□□□□ -0.54
VPS33A-202ENST00000451053 ARRDC5A6NEK1 342 aa11.7□□□□□ -0.54
VPS33A-202ENST00000451053 SAC3D1A6NKF1 404 aa11.7□□□□□ -0.54
VPS33A-202ENST00000451053 FIGNL2A6NMB9 653 aa11.7□□□□□ -0.54
VPS33A-202ENST00000451053 FFAR1O14842 300 aa11.7□□□□□ -0.54
VPS33A-202ENST00000451053 CHP2O43745 196 aa11.7□□□□□ -0.54
VPS33A-202ENST00000451053 WDR1O75083 606 aa11.7□□□□□ -0.54
VPS33A-202ENST00000451053 ACVR2AP27037 513 aa11.7□□□□□ -0.54
VPS33A-202ENST00000451053 PEX2P28328 305 aa11.7□□□□□ -0.54
VPS33A-202ENST00000451053 ACSF3Q4G176 576 aaPredicted RBP11.7□□□□□ -0.54
VPS33A-202ENST00000451053 HBMQ6B0K9 141 aa11.7□□□□□ -0.54
VPS33A-202ENST00000451053 WDR88Q6ZMY6 472 aa11.7□□□□□ -0.54
VPS33A-202ENST00000451053 ZBTB49Q6ZSB9 765 aa11.7□□□□□ -0.54
VPS33A-202ENST00000451053 ESPNLQ6ZVH7 1005 aa11.7□□□□□ -0.54
VPS33A-202ENST00000451053 NCCRP1Q6ZVX7 275 aaPredicted RBP11.7□□□□□ -0.54
VPS33A-202ENST00000451053 GDF7Q7Z4P5 450 aa11.7□□□□□ -0.54
VPS33A-202ENST00000451053 P3H2Q8IVL5 708 aa11.7□□□□□ -0.54
VPS33A-202ENST00000451053 OR10D3Q8NH80 312 aa11.7□□□□□ -0.54
VPS33A-202ENST00000451053 SLC25A43Q8WUT9 341 aaPredicted RBP11.7□□□□□ -0.54
VPS33A-202ENST00000451053 SLC38A4Q969I6 547 aa11.7□□□□□ -0.54
VPS33A-202ENST00000451053 MPP4Q96JB8 637 aa11.7□□□□□ -0.54
VPS33A-202ENST00000451053 ALPK1Q96QP1 1244 aa11.7□□□□□ -0.54
VPS33A-202ENST00000451053 CIB1Q99828 191 aa11.7□□□□□ -0.54
VPS33A-202ENST00000451053 PRSS27Q9BQR3 290 aa11.7□□□□□ -0.54
VPS33A-202ENST00000451053 KLHL4Q9C0H6 718 aa11.7□□□□□ -0.54
VPS33A-202ENST00000451053 GABARAPL1Q9H0R8 117 aa11.7□□□□□ -0.54
VPS33A-202ENST00000451053 C12orf10Q9HB07 376 aa11.7□□□□□ -0.54
VPS33A-202ENST00000451053 KRCC1Q9NPI7 259 aaPredicted RBP11.7□□□□□ -0.54
VPS33A-202ENST00000451053 RHCGQ9UBD6 479 aa11.7□□□□□ -0.54
VPS33A-202ENST00000451053 U3KQV3 271 aa11.7□□□□□ -0.54
VPS33A-202ENST00000451053 CFAP46Q8IYW2 2715 aa11.7□□□□□ -0.54
VPS33A-202ENST00000451053 SMG1Q96Q15 3661 aaKnown RBP11.7□□□□□ -0.54
VPS33A-202ENST00000451053 GTF3C1Q12789 2109 aa11.69□□□□□ -0.54
VPS33A-202ENST00000451053 A0A087WUJ7 227 aa11.69□□□□□ -0.54
VPS33A-202ENST00000451053 GJE1A6NN92 205 aa11.69□□□□□ -0.54
VPS33A-202ENST00000451053 CLCA1A8K7I4 914 aa11.69□□□□□ -0.54
VPS33A-202ENST00000451053 A8MVM7 634 aa11.69□□□□□ -0.54
VPS33A-202ENST00000451053 AHRRA9YTQ3 701 aa11.69□□□□□ -0.54
VPS33A-202ENST00000451053 ZNF208O43345 1280 aa11.69□□□□□ -0.54
VPS33A-202ENST00000451053 CXCL13O43927 109 aa11.69□□□□□ -0.54
VPS33A-202ENST00000451053 CCNB2O95067 398 aa11.69□□□□□ -0.54
VPS33A-202ENST00000451053 HPRP00739 348 aa11.69□□□□□ -0.54
VPS33A-202ENST00000451053 PNMTP11086 282 aa11.69□□□□□ -0.54
VPS33A-202ENST00000451053 GABRA1P14867 456 aa11.69□□□□□ -0.54
VPS33A-202ENST00000451053 IFNGR2P38484 337 aa11.69□□□□□ -0.54
VPS33A-202ENST00000451053 EIF1AXP47813 144 aaKnown RBP11.69□□□□□ -0.54
VPS33A-202ENST00000451053 LIMS1P48059 325 aa11.69□□□□□ -0.54
VPS33A-202ENST00000451053 CASP6P55212 293 aa11.69□□□□□ -0.54
VPS33A-202ENST00000451053 RPS3AP61247 264 aaKnown RBP11.69□□□□□ -0.54
VPS33A-202ENST00000451053 EGR4Q05215 589 aa11.69□□□□□ -0.54
VPS33A-202ENST00000451053 FOXD4Q12950 439 aaPredicted RBP11.69□□□□□ -0.54
VPS33A-202ENST00000451053 MYBPHQ13203 477 aa11.69□□□□□ -0.54
VPS33A-202ENST00000451053 MICAQ29983 383 aa11.69□□□□□ -0.54
VPS33A-202ENST00000451053 EXOC3L2Q2M3D2 409 aa11.69□□□□□ -0.54
VPS33A-202ENST00000451053 C1orf185Q5T7R7 199 aa11.69□□□□□ -0.54
VPS33A-202ENST00000451053 LPCAT4Q643R3 524 aa11.69□□□□□ -0.54
VPS33A-202ENST00000451053 RPTNQ6XPR3 784 aa11.69□□□□□ -0.54
VPS33A-202ENST00000451053 LINC00114Q6XXX2 140 aa11.69□□□□□ -0.54
VPS33A-202ENST00000451053 RRM2BQ7LG56 351 aa11.69□□□□□ -0.54
VPS33A-202ENST00000451053 ADGRE4PQ86SQ3 457 aa11.69□□□□□ -0.54
VPS33A-202ENST00000451053 STK32CQ86UX6 486 aa11.69□□□□□ -0.54
VPS33A-202ENST00000451053 MARVELD2Q8N4S9 558 aa11.69□□□□□ -0.54
VPS33A-202ENST00000451053 OR4C15Q8NGM1 316 aa11.69□□□□□ -0.54
VPS33A-202ENST00000451053 OR52J3Q8NH60 311 aa11.69□□□□□ -0.54
VPS33A-202ENST00000451053 ZPLD1Q8TCW7 415 aa11.69□□□□□ -0.54
VPS33A-202ENST00000451053 GIPC3Q8TF64 312 aa11.69□□□□□ -0.54
VPS33A-202ENST00000451053 OSTF1Q92882 214 aa11.69□□□□□ -0.54
VPS33A-202ENST00000451053 DDIT4LQ96D03 193 aa11.69□□□□□ -0.54
VPS33A-202ENST00000451053 HS6ST2Q96MM7 605 aa11.69□□□□□ -0.54
VPS33A-202ENST00000451053 TRIB1Q96RU8 372 aa11.69□□□□□ -0.54
VPS33A-202ENST00000451053 RBM4BQ9BQ04 359 aaKnown RBP11.69□□□□□ -0.54
VPS33A-202ENST00000451053 PSD2Q9BQI7 771 aa11.69□□□□□ -0.54
VPS33A-202ENST00000451053 RBM4Q9BWF3 364 aaKnown RBP11.69□□□□□ -0.54
VPS33A-202ENST00000451053 SRXN1Q9BYN0 137 aa11.69□□□□□ -0.54
VPS33A-202ENST00000451053 VNN3Q9NY84 501 aa11.69□□□□□ -0.54
VPS33A-202ENST00000451053 KIF17Q9P2E2 1029 aa11.69□□□□□ -0.54
VPS33A-202ENST00000451053 CLCF1Q9UBD9 225 aa11.69□□□□□ -0.54
VPS33A-202ENST00000451053 KIAA1549Q9HCM3 1950 aa11.68□□□□□ -0.54
VPS33A-202ENST00000451053 H0YJX3 145 aa11.68□□□□□ -0.54
VPS33A-202ENST00000451053 J3QKU1 62 aa11.68□□□□□ -0.54
VPS33A-202ENST00000451053 CCL21O00585 134 aa11.68□□□□□ -0.54
VPS33A-202ENST00000451053 NPIPB7O75200 414 aa11.68□□□□□ -0.54
VPS33A-202ENST00000451053 IMPDH2P12268 514 aa11.68□□□□□ -0.54
VPS33A-202ENST00000451053 FKBP2P26885 142 aaKnown RBP11.68□□□□□ -0.54
VPS33A-202ENST00000451053 RBM34P42696 430 aaKnown RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms