RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 EPXP11678 715 aa13.17□□□□□ -0.3
HDAC4-204ENST00000446876 FKBP2P26885 142 aaKnown RBP13.17□□□□□ -0.3
HDAC4-204ENST00000446876 SLC35A1P78382 337 aa13.17□□□□□ -0.3
HDAC4-204ENST00000446876 EGR4Q05215 589 aa13.17□□□□□ -0.3
HDAC4-204ENST00000446876 POU4F3Q15319 338 aa13.17□□□□□ -0.3
HDAC4-204ENST00000446876 TSC22D1Q15714 1073 aa13.17□□□□□ -0.3
HDAC4-204ENST00000446876 NPTX1Q15818 432 aa13.17□□□□□ -0.3
HDAC4-204ENST00000446876 NRF1Q16656 503 aa13.17□□□□□ -0.3
HDAC4-204ENST00000446876 ELOA3BQ3SY89 546 aa13.17□□□□□ -0.3
HDAC4-204ENST00000446876 C1orf140Q5VVS0 124 aa13.17□□□□□ -0.3
HDAC4-204ENST00000446876 STAC2Q6ZMT1 411 aa13.17□□□□□ -0.3
HDAC4-204ENST00000446876 C22orf34Q6ZV56 151 aa13.17□□□□□ -0.3
HDAC4-204ENST00000446876 PATL1Q86TB9 770 aaKnown RBP13.17□□□□□ -0.3
HDAC4-204ENST00000446876 STK32CQ86UX6 486 aa13.17□□□□□ -0.3
HDAC4-204ENST00000446876 RBM45Q8IUH3 476 aaKnown RBP13.17□□□□□ -0.3
HDAC4-204ENST00000446876 ELOA3Q8NG57 546 aa13.17□□□□□ -0.3
HDAC4-204ENST00000446876 RNF217Q8TC41 542 aa13.17□□□□□ -0.3
HDAC4-204ENST00000446876 ZC3HAV1LQ96H79 300 aaKnown RBP13.17□□□□□ -0.3
HDAC4-204ENST00000446876 WFIKKN1Q96NZ8 548 aa13.17□□□□□ -0.3
HDAC4-204ENST00000446876 POTEKPQ9BYX7 375 aa13.17□□□□□ -0.3
HDAC4-204ENST00000446876 TRIM2Q9C040 744 aa13.17□□□□□ -0.3
HDAC4-204ENST00000446876 GP6Q9HCN6 339 aa13.17□□□□□ -0.3
HDAC4-204ENST00000446876 TESQ9UGI8 421 aaKnown RBP13.17□□□□□ -0.3
HDAC4-204ENST00000446876 PRSS50Q9UI38 385 aa13.17□□□□□ -0.3
HDAC4-204ENST00000446876 TRAPPC4Q9Y296 219 aa13.17□□□□□ -0.3
HDAC4-204ENST00000446876 TEX15Q9BXT5 2789 aa13.17□□□□□ -0.3
HDAC4-204ENST00000446876 CSMD1Q96PZ7 3565 aa13.17□□□□□ -0.3
HDAC4-204ENST00000446876 PRR14LQ5THK1 2151 aa13.16□□□□□ -0.3
HDAC4-204ENST00000446876 IGKV1D-42A0A075B6H8 117 aa13.16□□□□□ -0.3
HDAC4-204ENST00000446876 ZNF724A8MTY0 619 aa13.16□□□□□ -0.3
HDAC4-204ENST00000446876 DNPH1O43598 174 aa13.16□□□□□ -0.3
HDAC4-204ENST00000446876 NPIPB7O75200 414 aa13.16□□□□□ -0.3
HDAC4-204ENST00000446876 TNFRSF1BP20333 461 aa13.16□□□□□ -0.3
HDAC4-204ENST00000446876 NUDT2P50583 147 aa13.16□□□□□ -0.3
HDAC4-204ENST00000446876 MAP2K6P52564 334 aa13.16□□□□□ -0.3
HDAC4-204ENST00000446876 H3F3AP84243 136 aa13.16□□□□□ -0.3
HDAC4-204ENST00000446876 OR1Q1Q15612 314 aa13.16□□□□□ -0.3
HDAC4-204ENST00000446876 ALG10BQ5I7T1 473 aa13.16□□□□□ -0.3
HDAC4-204ENST00000446876 OTUD3Q5T2D3 398 aaPredicted RBP13.16□□□□□ -0.3
HDAC4-204ENST00000446876 INTS11Q5TA45 600 aaKnown RBP13.16□□□□□ -0.3
HDAC4-204ENST00000446876 C6orf89Q6UWU4 347 aa13.16□□□□□ -0.3
HDAC4-204ENST00000446876 CCDC80Q76M96 950 aa13.16□□□□□ -0.3
HDAC4-204ENST00000446876 CXorf67Q86X51 503 aaPredicted RBP13.16□□□□□ -0.3
HDAC4-204ENST00000446876 TMEM99Q8N816 258 aa13.16□□□□□ -0.3
HDAC4-204ENST00000446876 LSMEM1Q8N8F7 131 aa13.16□□□□□ -0.3
HDAC4-204ENST00000446876 BHLHE22Q8NFJ8 381 aaPredicted RBP13.16□□□□□ -0.3
HDAC4-204ENST00000446876 OR6T1Q8NGN1 323 aa13.16□□□□□ -0.3
HDAC4-204ENST00000446876 PIGXQ8TBF5 258 aa13.16□□□□□ -0.3
HDAC4-204ENST00000446876 SLC26A7Q8TE54 656 aa13.16□□□□□ -0.3
HDAC4-204ENST00000446876 KTI12Q96EK9 354 aaPredicted RBP13.16□□□□□ -0.3
HDAC4-204ENST00000446876 DACH2Q96NX9 599 aa13.16□□□□□ -0.3
HDAC4-204ENST00000446876 MCHR1Q99705 422 aa13.16□□□□□ -0.3
HDAC4-204ENST00000446876 TACO1Q9BSH4 297 aaKnown RBP13.16□□□□□ -0.3
HDAC4-204ENST00000446876 MED18Q9BUE0 208 aa13.16□□□□□ -0.3
HDAC4-204ENST00000446876 PTDSS2Q9BVG9 487 aa13.16□□□□□ -0.3
HDAC4-204ENST00000446876 ADPRHL2Q9NX46 363 aa13.16□□□□□ -0.3
HDAC4-204ENST00000446876 POLQO75417 2590 aa13.16□□□□□ -0.3
HDAC4-204ENST00000446876 CSMD2Q7Z408 3487 aa13.15□□□□□ -0.3
HDAC4-204ENST00000446876 IGKV3D-15A0A087WSY6 115 aa13.15□□□□□ -0.3
HDAC4-204ENST00000446876 A0A0B4J2E0 115 aa13.15□□□□□ -0.3
HDAC4-204ENST00000446876 A0A1B0GX12 115 aa13.15□□□□□ -0.3
HDAC4-204ENST00000446876 CPSF4LA6NMK7 179 aaKnown RBP13.15□□□□□ -0.3
HDAC4-204ENST00000446876 NME4O00746 187 aa13.15□□□□□ -0.3
HDAC4-204ENST00000446876 AHSA1O95433 338 aa13.15□□□□□ -0.3
HDAC4-204ENST00000446876 IGHV3-9P01782 118 aa13.15□□□□□ -0.3
HDAC4-204ENST00000446876 GPIP06744 558 aa13.15□□□□□ -0.3
HDAC4-204ENST00000446876 NTF4P34130 210 aa13.15□□□□□ -0.3
HDAC4-204ENST00000446876 RPS5P46782 204 aaKnown RBP13.15□□□□□ -0.3
HDAC4-204ENST00000446876 OR3A2P47893 321 aa13.15□□□□□ -0.3
HDAC4-204ENST00000446876 SLC7A2P52569 658 aa13.15□□□□□ -0.3
HDAC4-204ENST00000446876 DAZAP2Q15038 168 aaPredicted RBP13.15□□□□□ -0.3
HDAC4-204ENST00000446876 LRRC23Q53EV4 343 aaPredicted RBP13.15□□□□□ -0.3
HDAC4-204ENST00000446876 ERICH5Q6P6B1 374 aa13.15□□□□□ -0.3
HDAC4-204ENST00000446876 BEND4Q6ZU67 534 aa13.15□□□□□ -0.3
HDAC4-204ENST00000446876 PIGWQ7Z7B1 504 aa13.15□□□□□ -0.3
HDAC4-204ENST00000446876 GALNT5Q7Z7M9 940 aa13.15□□□□□ -0.3
HDAC4-204ENST00000446876 RANBP3LQ86VV4 465 aaPredicted RBP13.15□□□□□ -0.3
HDAC4-204ENST00000446876 TSPYL5Q86VY4 417 aaPredicted RBP13.15□□□□□ -0.3
HDAC4-204ENST00000446876 SLC15A3Q8IY34 581 aa13.15□□□□□ -0.3
HDAC4-204ENST00000446876 MICU2Q8IYU8 434 aa13.15□□□□□ -0.3
HDAC4-204ENST00000446876 GABRG1Q8N1C3 465 aa13.15□□□□□ -0.3
HDAC4-204ENST00000446876 OR2T12Q8NG77 320 aa13.15□□□□□ -0.3
HDAC4-204ENST00000446876 STK35Q8TDR2 534 aa13.15□□□□□ -0.3
HDAC4-204ENST00000446876 SLC25A36Q96CQ1 311 aa13.15□□□□□ -0.3
HDAC4-204ENST00000446876 NAA11Q9BSU3 229 aaPredicted RBP13.15□□□□□ -0.3
HDAC4-204ENST00000446876 TAPBPLQ9BX59 468 aa13.15□□□□□ -0.3
HDAC4-204ENST00000446876 POLDIP3Q9BY77 421 aaKnown RBP13.15□□□□□ -0.3
HDAC4-204ENST00000446876 TMEM27Q9HBJ8 222 aa13.15□□□□□ -0.3
HDAC4-204ENST00000446876 RASSF1Q9NS23 344 aa13.15□□□□□ -0.3
HDAC4-204ENST00000446876 EMC3Q9P0I2 261 aa13.15□□□□□ -0.3
HDAC4-204ENST00000446876 C6orf203Q9P0P8 240 aaPredicted RBP13.15□□□□□ -0.3
HDAC4-204ENST00000446876 SEC14L4Q9UDX3 406 aa13.15□□□□□ -0.3
HDAC4-204ENST00000446876 NDRG3Q9UGV2 375 aa13.15□□□□□ -0.3
HDAC4-204ENST00000446876 NOSIPQ9Y314 301 aaKnown RBP13.15□□□□□ -0.3
HDAC4-204ENST00000446876 PDZD2O15018 2839 aa13.15□□□□□ -0.3
HDAC4-204ENST00000446876 LRBAP50851 2863 aa13.14□□□□□ -0.31
HDAC4-204ENST00000446876 HRNRQ86YZ3 2850 aaPredicted RBP13.14□□□□□ -0.31
HDAC4-204ENST00000446876 FAM221AA4D161 298 aa13.14□□□□□ -0.31
HDAC4-204ENST00000446876 AQP7P3A6NL99 342 aa13.14□□□□□ -0.31
HDAC4-204ENST00000446876 SIAH2O43255 324 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms