RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 GALNT5Q7Z7M9 940 aa20.98■□□□□ 0.95
VARS-217ENST00000440048 SLC30A8Q8IWU4 369 aa20.98■□□□□ 0.95
VARS-217ENST00000440048 GABRG1Q8N1C3 465 aa20.98■□□□□ 0.95
VARS-217ENST00000440048 SMYD1Q8NB12 490 aa20.98■□□□□ 0.95
VARS-217ENST00000440048 PCYOX1LQ8NBM8 494 aa20.98■□□□□ 0.95
VARS-217ENST00000440048 OR8J3Q8NGG0 315 aa20.98■□□□□ 0.95
VARS-217ENST00000440048 ELAC2Q9BQ52 826 aaKnown RBP20.98■□□□□ 0.95
VARS-217ENST00000440048 PRR14Q9BWN1 585 aa20.98■□□□□ 0.95
VARS-217ENST00000440048 EMC3Q9P0I2 261 aa20.98■□□□□ 0.95
VARS-217ENST00000440048 RPS6KB2Q9UBS0 482 aa20.98■□□□□ 0.95
VARS-217ENST00000440048 SLC13A4Q9UKG4 626 aa20.98■□□□□ 0.95
VARS-217ENST00000440048 LIPT2A6NK58 231 aa20.97■□□□□ 0.95
VARS-217ENST00000440048 M0QX08 132 aa20.97■□□□□ 0.95
VARS-217ENST00000440048 CCDC22O60826 627 aa20.97■□□□□ 0.95
VARS-217ENST00000440048 HRGP04196 525 aa20.97■□□□□ 0.95
VARS-217ENST00000440048 EDNRAP25101 427 aa20.97■□□□□ 0.95
VARS-217ENST00000440048 SLC16A1P53985 500 aa20.97■□□□□ 0.95
VARS-217ENST00000440048 POU4F3Q15319 338 aa20.97■□□□□ 0.95
VARS-217ENST00000440048 SPATA21Q7Z572 469 aa20.97■□□□□ 0.95
VARS-217ENST00000440048 CXorf67Q86X51 503 aaPredicted RBP20.97■□□□□ 0.95
VARS-217ENST00000440048 CALHM3Q86XJ0 350 aa20.97■□□□□ 0.95
VARS-217ENST00000440048 POU5F2Q8N7G0 328 aa20.97■□□□□ 0.95
VARS-217ENST00000440048 LSMEM1Q8N8F7 131 aa20.97■□□□□ 0.95
VARS-217ENST00000440048 OR52E4Q8NGH9 312 aa20.97■□□□□ 0.95
VARS-217ENST00000440048 ZC3HAV1LQ96H79 300 aaKnown RBP20.97■□□□□ 0.95
VARS-217ENST00000440048 WFDC6Q9BQY6 131 aa20.97■□□□□ 0.95
VARS-217ENST00000440048 NAA11Q9BSU3 229 aaPredicted RBP20.97■□□□□ 0.95
VARS-217ENST00000440048 TRIM2Q9C040 744 aa20.97■□□□□ 0.95
VARS-217ENST00000440048 GID8Q9NWU2 228 aa20.97■□□□□ 0.95
VARS-217ENST00000440048 ZNF226Q9NYT6 803 aa20.97■□□□□ 0.95
VARS-217ENST00000440048 PRSS50Q9UI38 385 aa20.97■□□□□ 0.95
VARS-217ENST00000440048 GPR52Q9Y2T5 361 aa20.97■□□□□ 0.95
VARS-217ENST00000440048 A0A1B0GWA3 101 aa20.96■□□□□ 0.95
VARS-217ENST00000440048 NPIPB7O75200 414 aa20.96■□□□□ 0.95
VARS-217ENST00000440048 OPN1SWP03999 348 aa20.96■□□□□ 0.95
VARS-217ENST00000440048 GPIP06744 558 aa20.96■□□□□ 0.95
VARS-217ENST00000440048 PSMB1P20618 241 aaKnown RBP20.96■□□□□ 0.95
VARS-217ENST00000440048 CRYGSP22914 178 aa20.96■□□□□ 0.95
VARS-217ENST00000440048 RGS8P57771 180 aaPredicted RBP20.96■□□□□ 0.95
VARS-217ENST00000440048 OR7A5Q15622 319 aa20.96■□□□□ 0.95
VARS-217ENST00000440048 VMACQ2NL98 169 aa20.96■□□□□ 0.95
VARS-217ENST00000440048 C1orf140Q5VVS0 124 aa20.96■□□□□ 0.95
VARS-217ENST00000440048 PAQR6Q6TCH4 344 aa20.96■□□□□ 0.95
VARS-217ENST00000440048 C6orf89Q6UWU4 347 aa20.96■□□□□ 0.95
VARS-217ENST00000440048 ZC3HAV1Q7Z2W4 902 aaKnown RBP20.96■□□□□ 0.95
VARS-217ENST00000440048 PATL1Q86TB9 770 aaKnown RBP20.96■□□□□ 0.95
VARS-217ENST00000440048 STK35Q8TDR2 534 aa20.96■□□□□ 0.95
VARS-217ENST00000440048 RCN3Q96D15 328 aa20.96■□□□□ 0.95
VARS-217ENST00000440048 ECSITQ9BQ95 431 aa20.96■□□□□ 0.95
VARS-217ENST00000440048 C6orf203Q9P0P8 240 aaPredicted RBP20.96■□□□□ 0.95
VARS-217ENST00000440048 TESQ9UGI8 421 aaKnown RBP20.96■□□□□ 0.95
VARS-217ENST00000440048 ELOA3DA6NLF2 546 aaPredicted RBP20.95■□□□□ 0.94
VARS-217ENST00000440048 GPR171O14626 319 aa20.95■□□□□ 0.94
VARS-217ENST00000440048 SIAH2O43255 324 aa20.95■□□□□ 0.94
VARS-217ENST00000440048 ADAP00813 363 aa20.95■□□□□ 0.94
VARS-217ENST00000440048 THBDP07204 575 aa20.95■□□□□ 0.94
VARS-217ENST00000440048 PPP3CBP16298 524 aa20.95■□□□□ 0.94
VARS-217ENST00000440048 DUSP7Q16829 419 aa20.95■□□□□ 0.94
VARS-217ENST00000440048 ELOA3BQ3SY89 546 aa20.95■□□□□ 0.94
VARS-217ENST00000440048 INTS11Q5TA45 600 aaKnown RBP20.95■□□□□ 0.94
VARS-217ENST00000440048 TMEM99Q8N816 258 aa20.95■□□□□ 0.94
VARS-217ENST00000440048 ELOA3Q8NG57 546 aa20.95■□□□□ 0.94
VARS-217ENST00000440048 GPR32P1Q8NGA4 272 aa20.95■□□□□ 0.94
VARS-217ENST00000440048 RP9Q8TA86 221 aaKnown RBP20.95■□□□□ 0.94
VARS-217ENST00000440048 ACTR6Q9GZN1 396 aa20.95■□□□□ 0.94
VARS-217ENST00000440048 LIME1Q9H400 295 aa20.95■□□□□ 0.94
VARS-217ENST00000440048 EVA1AQ9H8M9 152 aa20.95■□□□□ 0.94
VARS-217ENST00000440048 C12orf10Q9HB07 376 aa20.95■□□□□ 0.94
VARS-217ENST00000440048 ITGB1BP2Q9UKP3 347 aa20.95■□□□□ 0.94
VARS-217ENST00000440048 NOSIPQ9Y314 301 aaKnown RBP20.95■□□□□ 0.94
VARS-217ENST00000440048 DEFB108AA8MXU0 73 aa20.94■□□□□ 0.94
VARS-217ENST00000440048 TPST2O60704 377 aa20.94■□□□□ 0.94
VARS-217ENST00000440048 AKR7A3O95154 331 aa20.94■□□□□ 0.94
VARS-217ENST00000440048 LGI1O95970 557 aa20.94■□□□□ 0.94
VARS-217ENST00000440048 DRD4P21917 467 aa20.94■□□□□ 0.94
VARS-217ENST00000440048 DNAJA1P31689 397 aaKnown RBP20.94■□□□□ 0.94
VARS-217ENST00000440048 LSP1P33241 339 aa20.94■□□□□ 0.94
VARS-217ENST00000440048 NTF4P34130 210 aa20.94■□□□□ 0.94
VARS-217ENST00000440048 GYS2P54840 703 aa20.94■□□□□ 0.94
VARS-217ENST00000440048 NCALDP61601 193 aa20.94■□□□□ 0.94
VARS-217ENST00000440048 EGR4Q05215 589 aa20.94■□□□□ 0.94
VARS-217ENST00000440048 TSC22D1Q15714 1073 aa20.94■□□□□ 0.94
VARS-217ENST00000440048 OTUD3Q5T2D3 398 aaPredicted RBP20.94■□□□□ 0.94
VARS-217ENST00000440048 SFRP5Q5T4F7 317 aa20.94■□□□□ 0.94
VARS-217ENST00000440048 Q6ZT83 130 aa20.94■□□□□ 0.94
VARS-217ENST00000440048 ZNF100Q8IYN0 542 aa20.94■□□□□ 0.94
VARS-217ENST00000440048 DNAJA4Q8WW22 397 aaPredicted RBP20.94■□□□□ 0.94
VARS-217ENST00000440048 TAMM41Q96BW9 452 aa20.94■□□□□ 0.94
VARS-217ENST00000440048 ZNF583Q96ND8 569 aa20.94■□□□□ 0.94
VARS-217ENST00000440048 ARHGDIGQ99819 225 aa20.94■□□□□ 0.94
VARS-217ENST00000440048 TAPBPLQ9BX59 468 aa20.94■□□□□ 0.94
VARS-217ENST00000440048 HDHD5Q9BXW7 423 aa20.94■□□□□ 0.94
VARS-217ENST00000440048 FAM107BQ9H098 131 aa20.94■□□□□ 0.94
VARS-217ENST00000440048 OR10A4Q9H209 315 aa20.94■□□□□ 0.94
VARS-217ENST00000440048 ADPRHL2Q9NX46 363 aa20.94■□□□□ 0.94
VARS-217ENST00000440048 EDARQ9UNE0 448 aa20.94■□□□□ 0.94
VARS-217ENST00000440048 USP22Q9UPT9 525 aa20.94■□□□□ 0.94
VARS-217ENST00000440048 MED13LQ71F56 2210 aa20.94■□□□□ 0.94
VARS-217ENST00000440048 ITPR3Q14573 2671 aa20.94■□□□□ 0.94
VARS-217ENST00000440048 M0R3H8 397 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms