RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 CACNG6Q9BXT2 260 aa13.62□□□□□ -0.23
SEC13-210ENST00000428626 MTHFD2LQ9H903 347 aaPredicted RBP13.62□□□□□ -0.23
SEC13-210ENST00000428626 ARFGEF3Q5TH69 2177 aa13.62□□□□□ -0.23
SEC13-210ENST00000428626 DSPPQ9NZW4 1301 aa13.62□□□□□ -0.23
SEC13-210ENST00000428626 CDHR4A6H8M9 788 aa13.61□□□□□ -0.23
SEC13-210ENST00000428626 CFAP73A6NFT4 308 aa13.61□□□□□ -0.23
SEC13-210ENST00000428626 M0R1B8 84 aa13.61□□□□□ -0.23
SEC13-210ENST00000428626 HDAC3O15379 428 aa13.61□□□□□ -0.23
SEC13-210ENST00000428626 SSX4O60224 188 aa13.61□□□□□ -0.23
SEC13-210ENST00000428626 GPRIN2O60269 458 aa13.61□□□□□ -0.23
SEC13-210ENST00000428626 NR2F1P10589 423 aa13.61□□□□□ -0.23
SEC13-210ENST00000428626 KITP10721 976 aa13.61□□□□□ -0.23
SEC13-210ENST00000428626 PRG2P13727 222 aa13.61□□□□□ -0.23
SEC13-210ENST00000428626 ETFAP13804 333 aa13.61□□□□□ -0.23
SEC13-210ENST00000428626 PTAFRP25105 342 aa13.61□□□□□ -0.23
SEC13-210ENST00000428626 FKBP2P26885 142 aaKnown RBP13.61□□□□□ -0.23
SEC13-210ENST00000428626 MAGEA8P43361 318 aa13.61□□□□□ -0.23
SEC13-210ENST00000428626 HTR3AP46098 478 aa13.61□□□□□ -0.23
SEC13-210ENST00000428626 P2RY4P51582 365 aa13.61□□□□□ -0.23
SEC13-210ENST00000428626 SLC35A1P78382 337 aa13.61□□□□□ -0.23
SEC13-210ENST00000428626 DMTNQ08495 405 aa13.61□□□□□ -0.23
SEC13-210ENST00000428626 BNIP2Q12982 314 aa13.61□□□□□ -0.23
SEC13-210ENST00000428626 SLC9B1Q4ZJI4 515 aa13.61□□□□□ -0.23
SEC13-210ENST00000428626 SLC22A25Q6T423 547 aa13.61□□□□□ -0.23
SEC13-210ENST00000428626 TMEM108Q6UXF1 575 aa13.61□□□□□ -0.23
SEC13-210ENST00000428626 TMEM99Q8N816 258 aa13.61□□□□□ -0.23
SEC13-210ENST00000428626 VPS33AQ96AX1 596 aa13.61□□□□□ -0.23
SEC13-210ENST00000428626 AURKBQ96GD4 344 aaPredicted RBP13.61□□□□□ -0.23
SEC13-210ENST00000428626 ZNF385AQ96PM9 386 aaKnown RBP13.61□□□□□ -0.23
SEC13-210ENST00000428626 RSPO3Q9BXY4 272 aaPredicted RBP13.61□□□□□ -0.23
SEC13-210ENST00000428626 ALG2Q9H553 416 aa13.61□□□□□ -0.23
SEC13-210ENST00000428626 FBN3Q75N90 2809 aa13.61□□□□□ -0.23
SEC13-210ENST00000428626 TMEM120BA0PK00 339 aa13.6□□□□□ -0.23
SEC13-210ENST00000428626 LIPT2A6NK58 231 aa13.6□□□□□ -0.23
SEC13-210ENST00000428626 AKR7A3O95154 331 aa13.6□□□□□ -0.23
SEC13-210ENST00000428626 DBIP07108 87 aaKnown RBP13.6□□□□□ -0.23
SEC13-210ENST00000428626 IL7RP16871 459 aa13.6□□□□□ -0.23
SEC13-210ENST00000428626 LGALS3BPQ08380 585 aa13.6□□□□□ -0.23
SEC13-210ENST00000428626 CEACAM7Q14002 265 aa13.6□□□□□ -0.23
SEC13-210ENST00000428626 RPS26P11Q5JNZ5 115 aaPredicted RBP13.6□□□□□ -0.23
SEC13-210ENST00000428626 HHATQ5VTY9 493 aa13.6□□□□□ -0.23
SEC13-210ENST00000428626 AGAP6Q5VW22 663 aa13.6□□□□□ -0.23
SEC13-210ENST00000428626 PAQR6Q6TCH4 344 aa13.6□□□□□ -0.23
SEC13-210ENST00000428626 SSX8Q7RTT4 187 aa13.6□□□□□ -0.23
SEC13-210ENST00000428626 KIRREL3Q8IZU9 778 aa13.6□□□□□ -0.23
SEC13-210ENST00000428626 CLIP4Q8N3C7 705 aa13.6□□□□□ -0.23
SEC13-210ENST00000428626 TRIML2Q8N7C3 387 aa13.6□□□□□ -0.23
SEC13-210ENST00000428626 OR9I1Q8NGQ6 314 aa13.6□□□□□ -0.23
SEC13-210ENST00000428626 MGARPQ8TDB4 240 aa13.6□□□□□ -0.23
SEC13-210ENST00000428626 DDIT4LQ96D03 193 aa13.6□□□□□ -0.23
SEC13-210ENST00000428626 MAELQ96JY0 434 aaKnown RBP13.6□□□□□ -0.23
SEC13-210ENST00000428626 HS6ST2Q96MM7 605 aa13.6□□□□□ -0.23
SEC13-210ENST00000428626 DHRS9Q9BPW9 319 aa13.6□□□□□ -0.23
SEC13-210ENST00000428626 SLC17A5Q9NRA2 495 aa13.6□□□□□ -0.23
SEC13-210ENST00000428626 CBLN4Q9NTU7 201 aa13.6□□□□□ -0.23
SEC13-210ENST00000428626 THAP1Q9NVV9 213 aa13.6□□□□□ -0.23
SEC13-210ENST00000428626 SLC9A8Q9Y2E8 581 aa13.6□□□□□ -0.23
SEC13-210ENST00000428626 RFXANKO14593 260 aa13.59□□□□□ -0.23
SEC13-210ENST00000428626 CD5LO43866 347 aa13.59□□□□□ -0.23
SEC13-210ENST00000428626 EIF1BO60739 113 aaKnown RBP13.59□□□□□ -0.23
SEC13-210ENST00000428626 BCHEP06276 602 aa13.59□□□□□ -0.23
SEC13-210ENST00000428626 TFPTP0C1Z6 253 aa13.59□□□□□ -0.23
SEC13-210ENST00000428626 TXNL4AP83876 142 aaKnown RBP13.59□□□□□ -0.23
SEC13-210ENST00000428626 OR7A5Q15622 319 aa13.59□□□□□ -0.23
SEC13-210ENST00000428626 PDCD4Q53EL6 469 aaKnown RBP13.59□□□□□ -0.23
SEC13-210ENST00000428626 OTUD3Q5T2D3 398 aaPredicted RBP13.59□□□□□ -0.23
SEC13-210ENST00000428626 OR7E24Q6IFN5 339 aa13.59□□□□□ -0.23
SEC13-210ENST00000428626 MUC15Q8N387 334 aa13.59□□□□□ -0.23
SEC13-210ENST00000428626 OR10H5Q8NGA6 315 aa13.59□□□□□ -0.23
SEC13-210ENST00000428626 OR9K2Q8NGE7 335 aa13.59□□□□□ -0.23
SEC13-210ENST00000428626 OR52P1PQ8NH57 321 aa13.59□□□□□ -0.23
SEC13-210ENST00000428626 SLC38A5Q8WUX1 472 aa13.59□□□□□ -0.23
SEC13-210ENST00000428626 PMM1Q92871 262 aa13.59□□□□□ -0.23
SEC13-210ENST00000428626 TMEM45BQ96B21 275 aa13.59□□□□□ -0.23
SEC13-210ENST00000428626 RADILQ96JH8 1075 aa13.59□□□□□ -0.23
SEC13-210ENST00000428626 OR52B2Q96RD2 323 aa13.59□□□□□ -0.23
SEC13-210ENST00000428626 NAA11Q9BSU3 229 aaPredicted RBP13.59□□□□□ -0.23
SEC13-210ENST00000428626 FAIMQ9NVQ4 179 aa13.59□□□□□ -0.23
SEC13-210ENST00000428626 DCTN4Q9UJW0 460 aa13.59□□□□□ -0.23
SEC13-210ENST00000428626 MGAT4BQ9UQ53 548 aa13.59□□□□□ -0.23
SEC13-210ENST00000428626 SVEP1Q4LDE5 3571 aa13.58□□□□□ -0.23
SEC13-210ENST00000428626 AQP7P3A6NL99 342 aa13.58□□□□□ -0.24
SEC13-210ENST00000428626 SLC22A3O75751 556 aa13.58□□□□□ -0.24
SEC13-210ENST00000428626 LY6HO94772 140 aa13.58□□□□□ -0.24
SEC13-210ENST00000428626 KRT75O95678 551 aa13.58□□□□□ -0.24
SEC13-210ENST00000428626 NUDT7P0C024 238 aa13.58□□□□□ -0.24
SEC13-210ENST00000428626 NXNQ6DKJ4 435 aa13.58□□□□□ -0.24
SEC13-210ENST00000428626 KLHL17Q6TDP4 642 aa13.58□□□□□ -0.24
SEC13-210ENST00000428626 LINGO2Q7L985 606 aa13.58□□□□□ -0.24
SEC13-210ENST00000428626 PEX5LQ8IYB4 626 aa13.58□□□□□ -0.24
SEC13-210ENST00000428626 ZNF525Q8N782 197 aa13.58□□□□□ -0.24
SEC13-210ENST00000428626 GLB1L3Q8NCI6 653 aaPredicted RBP13.58□□□□□ -0.24
SEC13-210ENST00000428626 ZBTB18Q99592 522 aa13.58□□□□□ -0.24
SEC13-210ENST00000428626 TPT1P8Q9HAU6 139 aa13.58□□□□□ -0.24
SEC13-210ENST00000428626 BARX1Q9HBU1 254 aaPredicted RBP13.58□□□□□ -0.24
SEC13-210ENST00000428626 YAE1D1Q9NRH1 226 aa13.58□□□□□ -0.24
SEC13-210ENST00000428626 UPB1Q9UBR1 384 aa13.58□□□□□ -0.24
SEC13-210ENST00000428626 POU2F3Q9UKI9 436 aa13.58□□□□□ -0.24
SEC13-210ENST00000428626 ZNF443Q9Y2A4 671 aaPredicted RBP13.58□□□□□ -0.24
SEC13-210ENST00000428626 FAM234BA2RU67 622 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms