RNA–Protein interactions for RNA: ENST00000427710.5

RTN4-210, Transcript of reticulon 4, humanhuman

TSL 4

Gene RTN4, Length 589 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-210ENST00000427710 ZNF716A6NP11 495 aa13.18□□□□□ -0.3
RTN4-210ENST00000427710 ZNF724A8MTY0 619 aa13.18□□□□□ -0.3
RTN4-210ENST00000427710 DEFB108AA8MXU0 73 aa13.18□□□□□ -0.3
RTN4-210ENST00000427710 M0QX08 132 aa13.18□□□□□ -0.3
RTN4-210ENST00000427710 M0R3H8 397 aa13.18□□□□□ -0.3
RTN4-210ENST00000427710 MFN2O95140 757 aa13.18□□□□□ -0.3
RTN4-210ENST00000427710 CRYGSP22914 178 aa13.18□□□□□ -0.3
RTN4-210ENST00000427710 ADSLP30566 484 aaPredicted RBP13.18□□□□□ -0.3
RTN4-210ENST00000427710 IDUAP35475 653 aa13.18□□□□□ -0.3
RTN4-210ENST00000427710 OR3A2P47893 321 aa13.18□□□□□ -0.3
RTN4-210ENST00000427710 GZMMP51124 257 aa13.18□□□□□ -0.3
RTN4-210ENST00000427710 PCBP3P57721 371 aaKnown RBP13.18□□□□□ -0.3
RTN4-210ENST00000427710 SLC35A1P78382 337 aa13.18□□□□□ -0.3
RTN4-210ENST00000427710 CYLC2Q14093 348 aaPredicted RBP13.18□□□□□ -0.3
RTN4-210ENST00000427710 NET1Q7Z628 596 aaPredicted RBP13.18□□□□□ -0.3
RTN4-210ENST00000427710 GALNT5Q7Z7M9 940 aa13.18□□□□□ -0.3
RTN4-210ENST00000427710 WFDC8Q8IUA0 241 aa13.18□□□□□ -0.3
RTN4-210ENST00000427710 GABRG1Q8N1C3 465 aa13.18□□□□□ -0.3
RTN4-210ENST00000427710 GPR32P1Q8NGA4 272 aa13.18□□□□□ -0.3
RTN4-210ENST00000427710 OR52E4Q8NGH9 312 aa13.18□□□□□ -0.3
RTN4-210ENST00000427710 PIGXQ8TBF5 258 aa13.18□□□□□ -0.3
RTN4-210ENST00000427710 RNF217Q8TC41 542 aa13.18□□□□□ -0.3
RTN4-210ENST00000427710 RCN3Q96D15 328 aa13.18□□□□□ -0.3
RTN4-210ENST00000427710 POTEKPQ9BYX7 375 aa13.18□□□□□ -0.3
RTN4-210ENST00000427710 ACTR6Q9GZN1 396 aa13.18□□□□□ -0.3
RTN4-210ENST00000427710 GP6Q9HCN6 339 aa13.18□□□□□ -0.3
RTN4-210ENST00000427710 ADPRHL2Q9NX46 363 aa13.18□□□□□ -0.3
RTN4-210ENST00000427710 GMPR2Q9P2T1 348 aaKnown RBP13.18□□□□□ -0.3
RTN4-210ENST00000427710 RPS6KB2Q9UBS0 482 aa13.18□□□□□ -0.3
RTN4-210ENST00000427710 TRAPPC4Q9Y296 219 aa13.18□□□□□ -0.3
RTN4-210ENST00000427710 NOSIPQ9Y314 301 aaKnown RBP13.18□□□□□ -0.3
RTN4-210ENST00000427710 MAP1AP78559 2803 aaPredicted RBP13.17□□□□□ -0.3
RTN4-210ENST00000427710 VPS13CQ709C8 3753 aa13.17□□□□□ -0.3
RTN4-210ENST00000427710 A0A1B0GWA3 101 aa13.17□□□□□ -0.3
RTN4-210ENST00000427710 A8MVM7 634 aa13.17□□□□□ -0.3
RTN4-210ENST00000427710 TMEM229AB2RXF0 380 aa13.17□□□□□ -0.3
RTN4-210ENST00000427710 TPST2O60704 377 aa13.17□□□□□ -0.3
RTN4-210ENST00000427710 LYZL6O75951 148 aa13.17□□□□□ -0.3
RTN4-210ENST00000427710 FKBP2P26885 142 aaKnown RBP13.17□□□□□ -0.3
RTN4-210ENST00000427710 PCYT1AP49585 367 aa13.17□□□□□ -0.3
RTN4-210ENST00000427710 IST1P53990 364 aa13.17□□□□□ -0.3
RTN4-210ENST00000427710 RGS8P57771 180 aaPredicted RBP13.17□□□□□ -0.3
RTN4-210ENST00000427710 RBBP4Q09028 425 aa13.17□□□□□ -0.3
RTN4-210ENST00000427710 DUSP7Q16829 419 aa13.17□□□□□ -0.3
RTN4-210ENST00000427710 OTUD3Q5T2D3 398 aaPredicted RBP13.17□□□□□ -0.3
RTN4-210ENST00000427710 C1orf140Q5VVS0 124 aa13.17□□□□□ -0.3
RTN4-210ENST00000427710 ZNF100Q8IYN0 542 aa13.17□□□□□ -0.3
RTN4-210ENST00000427710 OR4D11Q8NGI4 311 aa13.17□□□□□ -0.3
RTN4-210ENST00000427710 S100PBPQ96BU1 408 aa13.17□□□□□ -0.3
RTN4-210ENST00000427710 SLC25A36Q96CQ1 311 aa13.17□□□□□ -0.3
RTN4-210ENST00000427710 HS3ST6Q96QI5 342 aa13.17□□□□□ -0.3
RTN4-210ENST00000427710 TACO1Q9BSH4 297 aaKnown RBP13.17□□□□□ -0.3
RTN4-210ENST00000427710 NAA11Q9BSU3 229 aaPredicted RBP13.17□□□□□ -0.3
RTN4-210ENST00000427710 PLEKHF2Q9H8W4 249 aa13.17□□□□□ -0.3
RTN4-210ENST00000427710 CCM2LQ9NUG4 571 aaPredicted RBP13.17□□□□□ -0.3
RTN4-210ENST00000427710 ZNF226Q9NYT6 803 aa13.17□□□□□ -0.3
RTN4-210ENST00000427710 SLC13A4Q9UKG4 626 aa13.17□□□□□ -0.3
RTN4-210ENST00000427710 USF3Q68DE3 2245 aa13.17□□□□□ -0.3
RTN4-210ENST00000427710 CELSR1Q9NYQ6 3014 aa13.17□□□□□ -0.3
RTN4-210ENST00000427710 PLCE1Q9P212 2302 aa13.17□□□□□ -0.3
RTN4-210ENST00000427710 IGKV3D-15A0A087WSY6 115 aa13.16□□□□□ -0.3
RTN4-210ENST00000427710 ELOA3DA6NLF2 546 aaPredicted RBP13.16□□□□□ -0.3
RTN4-210ENST00000427710 SERPINB7O75635 380 aa13.16□□□□□ -0.3
RTN4-210ENST00000427710 GPIP06744 558 aa13.16□□□□□ -0.3
RTN4-210ENST00000427710 CBLP22681 906 aa13.16□□□□□ -0.3
RTN4-210ENST00000427710 IL32P24001 234 aa13.16□□□□□ -0.3
RTN4-210ENST00000427710 LOXP28300 417 aaPredicted RBP13.16□□□□□ -0.3
RTN4-210ENST00000427710 PCGF2P35227 344 aa13.16□□□□□ -0.3
RTN4-210ENST00000427710 RPS5P46782 204 aaKnown RBP13.16□□□□□ -0.3
RTN4-210ENST00000427710 FOXG1P55316 489 aaPredicted RBP13.16□□□□□ -0.3
RTN4-210ENST00000427710 NCALDP61601 193 aa13.16□□□□□ -0.3
RTN4-210ENST00000427710 H3F3AP84243 136 aa13.16□□□□□ -0.3
RTN4-210ENST00000427710 EGR4Q05215 589 aa13.16□□□□□ -0.3
RTN4-210ENST00000427710 MAPRE2Q15555 327 aa13.16□□□□□ -0.3
RTN4-210ENST00000427710 OR1Q1Q15612 314 aa13.16□□□□□ -0.3
RTN4-210ENST00000427710 ELOA3BQ3SY89 546 aa13.16□□□□□ -0.3
RTN4-210ENST00000427710 SFRP5Q5T4F7 317 aa13.16□□□□□ -0.3
RTN4-210ENST00000427710 BHLHA15Q7RTS1 189 aaPredicted RBP13.16□□□□□ -0.3
RTN4-210ENST00000427710 TREML1Q86YW5 311 aa13.16□□□□□ -0.3
RTN4-210ENST00000427710 RBM45Q8IUH3 476 aaKnown RBP13.16□□□□□ -0.3
RTN4-210ENST00000427710 ELOA3Q8NG57 546 aa13.16□□□□□ -0.3
RTN4-210ENST00000427710 VANGL1Q8TAA9 524 aaPredicted RBP13.16□□□□□ -0.3
RTN4-210ENST00000427710 SLC35B4Q969S0 331 aa13.16□□□□□ -0.3
RTN4-210ENST00000427710 TAMM41Q96BW9 452 aa13.16□□□□□ -0.3
RTN4-210ENST00000427710 KTI12Q96EK9 354 aaPredicted RBP13.16□□□□□ -0.3
RTN4-210ENST00000427710 ECSITQ9BQ95 431 aa13.16□□□□□ -0.3
RTN4-210ENST00000427710 EMC3Q9P0I2 261 aa13.16□□□□□ -0.3
RTN4-210ENST00000427710 SEC14L4Q9UDX3 406 aa13.16□□□□□ -0.3
RTN4-210ENST00000427710 ST6GALNAC2Q9UJ37 374 aa13.16□□□□□ -0.3
RTN4-210ENST00000427710 GPR52Q9Y2T5 361 aa13.16□□□□□ -0.3
RTN4-210ENST00000427710 ZNF469Q96JG9 3925 aaPredicted RBP13.16□□□□□ -0.3
RTN4-210ENST00000427710 ITPR3Q14573 2671 aa13.15□□□□□ -0.3
RTN4-210ENST00000427710 IGKV1D-42A0A075B6H8 117 aa13.15□□□□□ -0.3
RTN4-210ENST00000427710 PRORSD1PA6NEY8 169 aa13.15□□□□□ -0.3
RTN4-210ENST00000427710 CCT8L1PA6NM43 557 aa13.15□□□□□ -0.3
RTN4-210ENST00000427710 ENO4A6NNW6 628 aa13.15□□□□□ -0.3
RTN4-210ENST00000427710 BBIP1A8MTZ0 92 aa13.15□□□□□ -0.3
RTN4-210ENST00000427710 DNPH1O43598 174 aa13.15□□□□□ -0.3
RTN4-210ENST00000427710 NPIPB7O75200 414 aa13.15□□□□□ -0.3
RTN4-210ENST00000427710 LGI1O95970 557 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms