RNA–Protein interactions for RNA: ENST00000419110.5

HMGB3-202, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 3

Gene HMGB3, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-202ENST00000419110 NOS3P29474 1203 aa5.41□□□□□ -1.54
HMGB3-202ENST00000419110 FMO3P31513 532 aa5.41□□□□□ -1.54
HMGB3-202ENST00000419110 IDUAP35475 653 aa5.41□□□□□ -1.54
HMGB3-202ENST00000419110 RPL4P36578 427 aaKnown RBP5.41□□□□□ -1.54
HMGB3-202ENST00000419110 POLR2IP36954 125 aaKnown RBP5.41□□□□□ -1.54
HMGB3-202ENST00000419110 PTGDSP41222 190 aa5.41□□□□□ -1.54
HMGB3-202ENST00000419110 APOBEC1P41238 236 aaKnown RBP5.41□□□□□ -1.54
HMGB3-202ENST00000419110 CASP3P42574 277 aa5.41□□□□□ -1.54
HMGB3-202ENST00000419110 MAP2K6P52564 334 aa5.41□□□□□ -1.54
HMGB3-202ENST00000419110 NR1H2P55055 460 aa5.41□□□□□ -1.54
HMGB3-202ENST00000419110 DLX5P56178 289 aa5.41□□□□□ -1.54
HMGB3-202ENST00000419110 PRPS1P60891 318 aa5.41□□□□□ -1.54
HMGB3-202ENST00000419110 ISL1P61371 349 aa5.41□□□□□ -1.54
HMGB3-202ENST00000419110 SNRPGP62308 76 aaKnown RBP5.41□□□□□ -1.54
HMGB3-202ENST00000419110 RPS4XP62701 263 aaKnown RBP5.41□□□□□ -1.54
HMGB3-202ENST00000419110 CSNK2BP67870 215 aa5.41□□□□□ -1.54
HMGB3-202ENST00000419110 MVKQ03426 396 aa5.41□□□□□ -1.54
HMGB3-202ENST00000419110 Q0VFX4 171 aa5.41□□□□□ -1.54
HMGB3-202ENST00000419110 CLN3Q13286 438 aa5.41□□□□□ -1.54
HMGB3-202ENST00000419110 GINS1Q14691 196 aa5.41□□□□□ -1.54
HMGB3-202ENST00000419110 SNAPC1Q16533 368 aa5.41□□□□□ -1.54
HMGB3-202ENST00000419110 ZNF74Q16587 644 aa5.41□□□□□ -1.54
HMGB3-202ENST00000419110 ZBED5Q49AG3 693 aa5.41□□□□□ -1.54
HMGB3-202ENST00000419110 CRTC2Q53ET0 693 aaPredicted RBP5.41□□□□□ -1.54
HMGB3-202ENST00000419110 TMEM201Q5SNT2 666 aa5.41□□□□□ -1.54
HMGB3-202ENST00000419110 C6orf141Q5SZD1 244 aa5.41□□□□□ -1.54
HMGB3-202ENST00000419110 FAM69AQ5T7M9 428 aa5.41□□□□□ -1.54
HMGB3-202ENST00000419110 LCN1P1Q5VSP4 162 aa5.41□□□□□ -1.54
HMGB3-202ENST00000419110 C1orf140Q5VVS0 124 aa5.41□□□□□ -1.54
HMGB3-202ENST00000419110 RAET1LQ5VY80 246 aa5.41□□□□□ -1.54
HMGB3-202ENST00000419110 MEDAGQ5VYS4 303 aa5.41□□□□□ -1.54
HMGB3-202ENST00000419110 B3GNTL1Q67FW5 361 aaPredicted RBP5.41□□□□□ -1.54
HMGB3-202ENST00000419110 H3F3CQ6NXT2 135 aa5.41□□□□□ -1.54
HMGB3-202ENST00000419110 AHSA2Q719I0 299 aa5.41□□□□□ -1.54
HMGB3-202ENST00000419110 HIST3H2AQ7L7L0 130 aa5.41□□□□□ -1.54
HMGB3-202ENST00000419110 MAMDC2Q7Z304 686 aaPredicted RBP5.41□□□□□ -1.54
HMGB3-202ENST00000419110 PRICKLE2Q7Z3G6 844 aa5.41□□□□□ -1.54
HMGB3-202ENST00000419110 SLC46A3Q7Z3Q1 461 aa5.41□□□□□ -1.54
HMGB3-202ENST00000419110 MDGA2Q7Z553 956 aa5.41□□□□□ -1.54
HMGB3-202ENST00000419110 CCDC71Q8IV32 467 aaPredicted RBP5.41□□□□□ -1.54
HMGB3-202ENST00000419110 GALNT16Q8N428 558 aa5.41□□□□□ -1.54
HMGB3-202ENST00000419110 FADS6Q8N9I5 356 aa5.41□□□□□ -1.54
HMGB3-202ENST00000419110 BPIFB6Q8NFQ5 453 aa5.41□□□□□ -1.54
HMGB3-202ENST00000419110 OR2M3Q8NG83 312 aa5.41□□□□□ -1.54
HMGB3-202ENST00000419110 OR1J4Q8NGS1 313 aa5.41□□□□□ -1.54
HMGB3-202ENST00000419110 TMEM163Q8TC26 289 aa5.41□□□□□ -1.54
HMGB3-202ENST00000419110 GPR119Q8TDV5 335 aa5.41□□□□□ -1.54
HMGB3-202ENST00000419110 DUSP19Q8WTR2 217 aa5.41□□□□□ -1.54
HMGB3-202ENST00000419110 TRUB1Q8WWH5 349 aaKnown RBP5.41□□□□□ -1.54
HMGB3-202ENST00000419110 HIST1H2ACQ93077 130 aa5.41□□□□□ -1.54
HMGB3-202ENST00000419110 RFKQ969G6 155 aa5.41□□□□□ -1.54
HMGB3-202ENST00000419110 SAMD8Q96LT4 415 aa5.41□□□□□ -1.54
HMGB3-202ENST00000419110 JSRP1Q96MG2 331 aaPredicted RBP5.41□□□□□ -1.54
HMGB3-202ENST00000419110 GPX7Q96SL4 187 aaPredicted RBP5.41□□□□□ -1.54
HMGB3-202ENST00000419110 TAPBPLQ9BX59 468 aa5.41□□□□□ -1.54
HMGB3-202ENST00000419110 ASPNQ9BXN1 380 aa5.41□□□□□ -1.54
HMGB3-202ENST00000419110 ANGPTL4Q9BY76 406 aa5.41□□□□□ -1.54
HMGB3-202ENST00000419110 CCDC90BQ9GZT6 254 aa5.41□□□□□ -1.54
HMGB3-202ENST00000419110 RNF32Q9H0A6 362 aa5.41□□□□□ -1.54
HMGB3-202ENST00000419110 FN3KQ9H479 309 aa5.41□□□□□ -1.54
HMGB3-202ENST00000419110 MEPEQ9NQ76 525 aaPredicted RBP5.41□□□□□ -1.54
HMGB3-202ENST00000419110 NANSQ9NR45 359 aa5.41□□□□□ -1.54
HMGB3-202ENST00000419110 SERINC1Q9NRX5 453 aa5.41□□□□□ -1.54
HMGB3-202ENST00000419110 ALKBH4Q9NXW9 302 aa5.41□□□□□ -1.54
HMGB3-202ENST00000419110 IL20Q9NYY1 176 aa5.41□□□□□ -1.54
HMGB3-202ENST00000419110 TVP23BQ9NYZ1 205 aa5.41□□□□□ -1.54
HMGB3-202ENST00000419110 DNAJC27Q9NZQ0 273 aa5.41□□□□□ -1.54
HMGB3-202ENST00000419110 MED11Q9P086 117 aa5.41□□□□□ -1.54
HMGB3-202ENST00000419110 KLHL21Q9UJP4 597 aa5.41□□□□□ -1.54
HMGB3-202ENST00000419110 OSGIN1Q9UJX0 560 aa5.41□□□□□ -1.54
HMGB3-202ENST00000419110 SIGLEC7Q9Y286 467 aa5.41□□□□□ -1.54
HMGB3-202ENST00000419110 KLF13Q9Y2Y9 288 aaPredicted RBP5.41□□□□□ -1.54
HMGB3-202ENST00000419110 PCDHGB5Q9Y5G0 923 aa5.41□□□□□ -1.54
HMGB3-202ENST00000419110 CORINQ9Y5Q5 1042 aa5.41□□□□□ -1.54
HMGB3-202ENST00000419110 SPEGQ15772 3267 aa5.4□□□□□ -1.54
HMGB3-202ENST00000419110 TMEM72A0PK05 275 aa5.4□□□□□ -1.54
HMGB3-202ENST00000419110 OR5H15A6NDH6 313 aa5.4□□□□□ -1.54
HMGB3-202ENST00000419110 EFCAB10A6NFE3 127 aa5.4□□□□□ -1.54
HMGB3-202ENST00000419110 GJE1A6NN92 205 aa5.4□□□□□ -1.54
HMGB3-202ENST00000419110 G3V3Y1 287 aa5.4□□□□□ -1.54
HMGB3-202ENST00000419110 ACOT7O00154 380 aa5.4□□□□□ -1.54
HMGB3-202ENST00000419110 MASP2O00187 686 aa5.4□□□□□ -1.54
HMGB3-202ENST00000419110 ETV2O00321 342 aaPredicted RBP5.4□□□□□ -1.54
HMGB3-202ENST00000419110 SURF4O15260 269 aa5.4□□□□□ -1.54
HMGB3-202ENST00000419110 PRODHO43272 600 aa5.4□□□□□ -1.54
HMGB3-202ENST00000419110 ZNF208O43345 1280 aa5.4□□□□□ -1.54
HMGB3-202ENST00000419110 OR2T1O43869 369 aa5.4□□□□□ -1.54
HMGB3-202ENST00000419110 WBP4O75554 376 aaKnown RBP5.4□□□□□ -1.54
HMGB3-202ENST00000419110 SERPINI2O75830 405 aa5.4□□□□□ -1.54
HMGB3-202ENST00000419110 OR6A2O95222 327 aa5.4□□□□□ -1.54
HMGB3-202ENST00000419110 PPP1R3DO95685 299 aa5.4□□□□□ -1.54
HMGB3-202ENST00000419110 TP53P04637 393 aaPredicted RBP5.4□□□□□ -1.54
HMGB3-202ENST00000419110 IGFBP1P08833 259 aaPredicted RBP5.4□□□□□ -1.54
HMGB3-202ENST00000419110 TFPIP10646 304 aa5.4□□□□□ -1.54
HMGB3-202ENST00000419110 PIPP12273 146 aaPredicted RBP5.4□□□□□ -1.54
HMGB3-202ENST00000419110 HK1P19367 917 aa5.4□□□□□ -1.54
HMGB3-202ENST00000419110 TCEA1P23193 301 aaKnown RBP5.4□□□□□ -1.54
HMGB3-202ENST00000419110 DPP4P27487 766 aa5.4□□□□□ -1.54
HMGB3-202ENST00000419110 ADH6P28332 368 aa5.4□□□□□ -1.54
HMGB3-202ENST00000419110 SRD5A2P31213 254 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 117.7 ms