RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 WIF1Q9Y5W5 379 aa4.41□□□□□ -1.7
VPS41-205ENST00000414632 DOPEY1Q5JWR5 2465 aa4.41□□□□□ -1.7
VPS41-205ENST00000414632 SPTBN1Q01082 2364 aaKnown RBP4.41□□□□□ -1.7
VPS41-205ENST00000414632 MED12LQ86YW9 2145 aa4.4□□□□□ -1.7
VPS41-205ENST00000414632 TRGV11A0A075B6L2 103 aa4.4□□□□□ -1.71
VPS41-205ENST00000414632 A0A0G2JND7 137 aa4.4□□□□□ -1.71
VPS41-205ENST00000414632 CENPVL1A0A0U1RR11 272 aa4.4□□□□□ -1.71
VPS41-205ENST00000414632 PRSS51A0A1B0GVH4 220 aa4.4□□□□□ -1.71
VPS41-205ENST00000414632 SAC3D1A6NKF1 404 aa4.4□□□□□ -1.71
VPS41-205ENST00000414632 RNASET2O00584 256 aaKnown RBP4.4□□□□□ -1.71
VPS41-205ENST00000414632 PAX4O43316 350 aa4.4□□□□□ -1.71
VPS41-205ENST00000414632 EDF1O60869 148 aaKnown RBP4.4□□□□□ -1.71
VPS41-205ENST00000414632 SLC22A3O75751 556 aa4.4□□□□□ -1.71
VPS41-205ENST00000414632 SNX4O95219 450 aa4.4□□□□□ -1.71
VPS41-205ENST00000414632 OXSR1O95747 527 aaPredicted RBP4.4□□□□□ -1.71
VPS41-205ENST00000414632 ANGPTL1O95841 491 aa4.4□□□□□ -1.71
VPS41-205ENST00000414632 PLATP00750 562 aa4.4□□□□□ -1.71
VPS41-205ENST00000414632 IGHG3P01860 377 aa4.4□□□□□ -1.71
VPS41-205ENST00000414632 HPNP05981 417 aa4.4□□□□□ -1.71
VPS41-205ENST00000414632 OR12D1P0DN82 309 aa4.4□□□□□ -1.71
VPS41-205ENST00000414632 IDO1P14902 403 aa4.4□□□□□ -1.71
VPS41-205ENST00000414632 DDX5P17844 614 aaKnown RBP4.4□□□□□ -1.71
VPS41-205ENST00000414632 DPP4P27487 766 aa4.4□□□□□ -1.71
VPS41-205ENST00000414632 CHI3L1P36222 383 aaPredicted RBP4.4□□□□□ -1.71
VPS41-205ENST00000414632 MAP3K8P41279 467 aa4.4□□□□□ -1.71
VPS41-205ENST00000414632 ZFP36L2P47974 494 aaKnown RBP4.4□□□□□ -1.71
VPS41-205ENST00000414632 STARP49675 285 aa4.4□□□□□ -1.71
VPS41-205ENST00000414632 POLR2JP52435 117 aaKnown RBP4.4□□□□□ -1.71
VPS41-205ENST00000414632 NUP107P57740 925 aa4.4□□□□□ -1.71
VPS41-205ENST00000414632 FAM3BP58499 235 aaPredicted RBP4.4□□□□□ -1.71
VPS41-205ENST00000414632 C21orf58P58505 322 aa4.4□□□□□ -1.71
VPS41-205ENST00000414632 SRYQ05066 204 aa4.4□□□□□ -1.71
VPS41-205ENST00000414632 GPR68Q15743 365 aa4.4□□□□□ -1.71
VPS41-205ENST00000414632 CD226Q15762 336 aa4.4□□□□□ -1.71
VPS41-205ENST00000414632 TSTQ16762 297 aaKnown RBP4.4□□□□□ -1.71
VPS41-205ENST00000414632 HYAL4Q2M3T9 481 aa4.4□□□□□ -1.71
VPS41-205ENST00000414632 VPS26BQ4G0F5 336 aa4.4□□□□□ -1.71
VPS41-205ENST00000414632 GXYLT1Q4G148 440 aa4.4□□□□□ -1.71
VPS41-205ENST00000414632 HSP90B2PQ58FF3 399 aa4.4□□□□□ -1.71
VPS41-205ENST00000414632 C6orf10Q5SRN2 563 aa4.4□□□□□ -1.71
VPS41-205ENST00000414632 DCST2Q5T1A1 773 aa4.4□□□□□ -1.71
VPS41-205ENST00000414632 ANXA8L1Q5VT79 327 aa4.4□□□□□ -1.71
VPS41-205ENST00000414632 RTL6Q6ICC9 239 aa4.4□□□□□ -1.71
VPS41-205ENST00000414632 CGB2Q6NT52 195 aa4.4□□□□□ -1.71
VPS41-205ENST00000414632 CDC73Q6P1J9 531 aa4.4□□□□□ -1.71
VPS41-205ENST00000414632 SLC2A7Q6PXP3 512 aa4.4□□□□□ -1.71
VPS41-205ENST00000414632 Q6ZPB1 254 aaPredicted RBP4.4□□□□□ -1.71
VPS41-205ENST00000414632 ZNF621Q6ZSS3 439 aa4.4□□□□□ -1.71
VPS41-205ENST00000414632 CAMKMTQ7Z624 323 aa4.4□□□□□ -1.71
VPS41-205ENST00000414632 MRGPRGQ86SM5 289 aa4.4□□□□□ -1.71
VPS41-205ENST00000414632 DTX2Q86UW9 622 aa4.4□□□□□ -1.71
VPS41-205ENST00000414632 RNF130Q86XS8 419 aa4.4□□□□□ -1.71
VPS41-205ENST00000414632 PLCZ1Q86YW0 608 aa4.4□□□□□ -1.71
VPS41-205ENST00000414632 ARMC8Q8IUR7 673 aa4.4□□□□□ -1.71
VPS41-205ENST00000414632 CCDC71Q8IV32 467 aaPredicted RBP4.4□□□□□ -1.71
VPS41-205ENST00000414632 UBQLNLQ8IYU4 475 aa4.4□□□□□ -1.71
VPS41-205ENST00000414632 OR4C3Q8NH37 302 aa4.4□□□□□ -1.71
VPS41-205ENST00000414632 PSMA8Q8TAA3 256 aa4.4□□□□□ -1.71
VPS41-205ENST00000414632 NEIL3Q8TAT5 605 aa4.4□□□□□ -1.71
VPS41-205ENST00000414632 SFXN5Q8TD22 340 aa4.4□□□□□ -1.71
VPS41-205ENST00000414632 DUSP19Q8WTR2 217 aa4.4□□□□□ -1.71
VPS41-205ENST00000414632 ITLN2Q8WWU7 325 aaPredicted RBP4.4□□□□□ -1.71
VPS41-205ENST00000414632 SMPDL3BQ92485 455 aa4.4□□□□□ -1.71
VPS41-205ENST00000414632 TESCQ96BS2 214 aa4.4□□□□□ -1.71
VPS41-205ENST00000414632 AURKBQ96GD4 344 aaPredicted RBP4.4□□□□□ -1.71
VPS41-205ENST00000414632 CCDC115Q96NT0 180 aa4.4□□□□□ -1.71
VPS41-205ENST00000414632 PANX1Q96RD7 426 aa4.4□□□□□ -1.71
VPS41-205ENST00000414632 SECISBP2Q96T21 854 aaKnown RBP4.4□□□□□ -1.71
VPS41-205ENST00000414632 NPAS1Q99742 590 aa4.4□□□□□ -1.71
VPS41-205ENST00000414632 UGT2B28Q9BY64 529 aa4.4□□□□□ -1.71
VPS41-205ENST00000414632 TBL1XR1Q9BZK7 514 aa4.4□□□□□ -1.71
VPS41-205ENST00000414632 OR51I1Q9H343 314 aa4.4□□□□□ -1.71
VPS41-205ENST00000414632 UBQLN3Q9H347 655 aa4.4□□□□□ -1.71
VPS41-205ENST00000414632 PIGUQ9H490 435 aa4.4□□□□□ -1.71
VPS41-205ENST00000414632 PRDM13Q9H4Q3 707 aa4.4□□□□□ -1.71
VPS41-205ENST00000414632 AKIP1Q9NQ31 210 aa4.4□□□□□ -1.71
VPS41-205ENST00000414632 TRIM36Q9NQ86 728 aa4.4□□□□□ -1.71
VPS41-205ENST00000414632 FAM120CQ9NX05 1096 aaKnown RBP4.4□□□□□ -1.71
VPS41-205ENST00000414632 CCDC167Q9P0B6 97 aa4.4□□□□□ -1.71
VPS41-205ENST00000414632 PLEKHB1Q9UF11 243 aaPredicted RBP4.4□□□□□ -1.71
VPS41-205ENST00000414632 MRTO4Q9UKD2 239 aaKnown RBP4.4□□□□□ -1.71
VPS41-205ENST00000414632 MKLN1Q9UL63 735 aa4.4□□□□□ -1.71
VPS41-205ENST00000414632 PCDHGB4Q9UN71 923 aa4.4□□□□□ -1.71
VPS41-205ENST00000414632 RCE1Q9Y256 329 aa4.4□□□□□ -1.71
VPS41-205ENST00000414632 VDAC3Q9Y277 283 aa4.4□□□□□ -1.71
VPS41-205ENST00000414632 FAM215AQ9Y5M1 114 aa4.4□□□□□ -1.71
VPS41-205ENST00000414632 LRBAP50851 2863 aa4.4□□□□□ -1.71
VPS41-205ENST00000414632 HRNRQ86YZ3 2850 aaPredicted RBP4.4□□□□□ -1.71
VPS41-205ENST00000414632 GAGE12BA1L429 117 aa4.39□□□□□ -1.71
VPS41-205ENST00000414632 NKX2-6A6NCS4 301 aa4.39□□□□□ -1.71
VPS41-205ENST00000414632 GAGE12HA6NDE8 117 aa4.39□□□□□ -1.71
VPS41-205ENST00000414632 WIPF3A6NGB9 483 aa4.39□□□□□ -1.71
VPS41-205ENST00000414632 AGAP5A6NIR3 686 aa4.39□□□□□ -1.71
VPS41-205ENST00000414632 MARCH11A6NNE9 402 aa4.39□□□□□ -1.71
VPS41-205ENST00000414632 PRSS44E7EML9 344 aa4.39□□□□□ -1.71
VPS41-205ENST00000414632 H0YC42 278 aa4.39□□□□□ -1.71
VPS41-205ENST00000414632 C19orf84I3L1E1 186 aa4.39□□□□□ -1.71
VPS41-205ENST00000414632 PSMD9O00233 223 aa4.39□□□□□ -1.71
VPS41-205ENST00000414632 SEC14L5O43304 696 aa4.39□□□□□ -1.71
VPS41-205ENST00000414632 FCMRO60667 390 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms