RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 ZNF85Q03923 595 aa4.17□□□□□ -1.74
LSM5-206ENST00000409987 ZFP36L1Q07352 338 aaKnown RBP4.17□□□□□ -1.74
LSM5-206ENST00000409987 RAB40BQ12829 278 aa4.17□□□□□ -1.74
LSM5-206ENST00000409987 SLAQ13239 276 aa4.17□□□□□ -1.74
LSM5-206ENST00000409987 ITIH4Q14624 930 aa4.17□□□□□ -1.74
LSM5-206ENST00000409987 MS4A18Q3C1V0 323 aa4.17□□□□□ -1.74
LSM5-206ENST00000409987 VPS26BQ4G0F5 336 aa4.17□□□□□ -1.74
LSM5-206ENST00000409987 TMEM52BQ4KMG9 183 aa4.17□□□□□ -1.74
LSM5-206ENST00000409987 CEP85LQ5SZL2 805 aa4.17□□□□□ -1.74
LSM5-206ENST00000409987 DCST2Q5T1A1 773 aa4.17□□□□□ -1.74
LSM5-206ENST00000409987 WSCD1Q658N2 575 aa4.17□□□□□ -1.74
LSM5-206ENST00000409987 ERICH5Q6P6B1 374 aa4.17□□□□□ -1.74
LSM5-206ENST00000409987 ZNF497Q6ZNH5 498 aa4.17□□□□□ -1.74
LSM5-206ENST00000409987 MARCH9Q86YJ5 346 aa4.17□□□□□ -1.74
LSM5-206ENST00000409987 LINC01561Q8N1V8 128 aa4.17□□□□□ -1.74
LSM5-206ENST00000409987 ZNRF1Q8ND25 227 aa4.17□□□□□ -1.74
LSM5-206ENST00000409987 PROKR2Q8NFJ6 384 aa4.17□□□□□ -1.74
LSM5-206ENST00000409987 ZNF596Q8TC21 504 aa4.17□□□□□ -1.74
LSM5-206ENST00000409987 PCNPQ8WW12 178 aaKnown RBP4.17□□□□□ -1.74
LSM5-206ENST00000409987 UBE2E3Q969T4 207 aa4.17□□□□□ -1.74
LSM5-206ENST00000409987 NTNG2Q96CW9 530 aa4.17□□□□□ -1.74
LSM5-206ENST00000409987 CERS2Q96G23 380 aa4.17□□□□□ -1.74
LSM5-206ENST00000409987 PAIP2Q9BPZ3 127 aaKnown RBP4.17□□□□□ -1.74
LSM5-206ENST00000409987 ROGDIQ9GZN7 287 aa4.17□□□□□ -1.74
LSM5-206ENST00000409987 SPACA1Q9HBV2 294 aa4.17□□□□□ -1.74
LSM5-206ENST00000409987 CCNB1IP1Q9NPC3 277 aa4.17□□□□□ -1.74
LSM5-206ENST00000409987 DEPPQ9NTK1 212 aa4.17□□□□□ -1.74
LSM5-206ENST00000409987 CHMP5Q9NZZ3 219 aa4.17□□□□□ -1.74
LSM5-206ENST00000409987 THYN1Q9P016 225 aa4.17□□□□□ -1.74
LSM5-206ENST00000409987 STOX2Q9P2F5 926 aaPredicted RBP4.17□□□□□ -1.74
LSM5-206ENST00000409987 CIDEBQ9UHD4 219 aa4.17□□□□□ -1.74
LSM5-206ENST00000409987 SCML2Q9UQR0 700 aa4.17□□□□□ -1.74
LSM5-206ENST00000409987 SIGLEC1Q9BZZ2 1709 aa4.17□□□□□ -1.74
LSM5-206ENST00000409987 PLA2R1Q13018 1463 aa4.17□□□□□ -1.74
LSM5-206ENST00000409987 RAPGEF2Q9Y4G8 1499 aa4.17□□□□□ -1.74
LSM5-206ENST00000409987 CAMSAP1Q5T5Y3 1602 aa4.17□□□□□ -1.74
LSM5-206ENST00000409987 ZMYM4Q5VZL5 1548 aa4.16□□□□□ -1.74
LSM5-206ENST00000409987 NDUFAF8A1L188 74 aa4.16□□□□□ -1.74
LSM5-206ENST00000409987 IGLON5A6NGN9 336 aa4.16□□□□□ -1.74
LSM5-206ENST00000409987 H7C423 109 aa4.16□□□□□ -1.74
LSM5-206ENST00000409987 K7ERI5 159 aa4.16□□□□□ -1.74
LSM5-206ENST00000409987 LATO43561 262 aa4.16□□□□□ -1.74
LSM5-206ENST00000409987 ATP5LO75964 103 aa4.16□□□□□ -1.74
LSM5-206ENST00000409987 TRIM49P0CI25 452 aa4.16□□□□□ -1.74
LSM5-206ENST00000409987 TRIM49CP0CI26 452 aa4.16□□□□□ -1.74
LSM5-206ENST00000409987 ZNF43P17038 809 aa4.16□□□□□ -1.74
LSM5-206ENST00000409987 GTF2E2P29084 291 aaKnown RBP4.16□□□□□ -1.74
LSM5-206ENST00000409987 MAP3K8P41279 467 aa4.16□□□□□ -1.74
LSM5-206ENST00000409987 GNPDA1P46926 289 aa4.16□□□□□ -1.74
LSM5-206ENST00000409987 QARSP47897 775 aaKnown RBP4.16□□□□□ -1.74
LSM5-206ENST00000409987 UQCRFS1P47985 274 aa4.16□□□□□ -1.74
LSM5-206ENST00000409987 RAB10P61026 200 aa4.16□□□□□ -1.74
LSM5-206ENST00000409987 YWHAEP62258 255 aaKnown RBP4.16□□□□□ -1.74
LSM5-206ENST00000409987 KCNJ2P63252 427 aa4.16□□□□□ -1.74
LSM5-206ENST00000409987 ZNF77Q15935 545 aa4.16□□□□□ -1.74
LSM5-206ENST00000409987 MRPL23Q16540 153 aaKnown RBP4.16□□□□□ -1.74
LSM5-206ENST00000409987 DMRTC1Q5HYR2 192 aa4.16□□□□□ -1.74
LSM5-206ENST00000409987 WDR25Q64LD2 544 aaPredicted RBP4.16□□□□□ -1.74
LSM5-206ENST00000409987 ADAMTSL5Q6ZMM2 481 aa4.16□□□□□ -1.74
LSM5-206ENST00000409987 C19orf35Q6ZS72 473 aa4.16□□□□□ -1.74
LSM5-206ENST00000409987 CEACAM19Q7Z692 300 aa4.16□□□□□ -1.74
LSM5-206ENST00000409987 RNF130Q86XS8 419 aa4.16□□□□□ -1.74
LSM5-206ENST00000409987 KRTAP7-1Q8IUC3 87 aa4.16□□□□□ -1.74
LSM5-206ENST00000409987 OR4D9Q8NGE8 314 aa4.16□□□□□ -1.74
LSM5-206ENST00000409987 OR5T3Q8NGG3 340 aa4.16□□□□□ -1.74
LSM5-206ENST00000409987 FAM110BQ8TC76 370 aa4.16□□□□□ -1.74
LSM5-206ENST00000409987 CLCC1Q96S66 551 aa4.16□□□□□ -1.74
LSM5-206ENST00000409987 MAPKAP1Q9BPZ7 522 aa4.16□□□□□ -1.74
LSM5-206ENST00000409987 FAM173AQ9BQD7 235 aa4.16□□□□□ -1.74
LSM5-206ENST00000409987 KRTAP2-2Q9BYT5 123 aa4.16□□□□□ -1.74
LSM5-206ENST00000409987 TREM1Q9NP99 234 aa4.16□□□□□ -1.74
LSM5-206ENST00000409987 PXMP2Q9NR77 195 aa4.16□□□□□ -1.74
LSM5-206ENST00000409987 TAS2R16Q9NYV7 291 aa4.16□□□□□ -1.74
LSM5-206ENST00000409987 BFARQ9NZS9 450 aa4.16□□□□□ -1.74
LSM5-206ENST00000409987 KIAA0556O60303 1618 aa4.16□□□□□ -1.74
LSM5-206ENST00000409987 ABCA9Q8IUA7 1624 aa4.16□□□□□ -1.74
LSM5-206ENST00000409987 SHANK2Q9UPX8 1470 aa4.16□□□□□ -1.74
LSM5-206ENST00000409987 EFCAB5A4FU69 1503 aa4.16□□□□□ -1.74
LSM5-206ENST00000409987 ZFYVE16Q7Z3T8 1539 aa4.16□□□□□ -1.74
LSM5-206ENST00000409987 NPATQ14207 1427 aa4.15□□□□□ -1.74
LSM5-206ENST00000409987 SNED1Q8TER0 1413 aa4.15□□□□□ -1.74
LSM5-206ENST00000409987 IGLV4-3A0A075B6K6 122 aa4.15□□□□□ -1.75
LSM5-206ENST00000409987 TRGV8A0A0C4DH27 118 aa4.15□□□□□ -1.75
LSM5-206ENST00000409987 TRBV7-9A0A0J9YWB2 115 aa4.15□□□□□ -1.75
LSM5-206ENST00000409987 ERICH2A1L162 156 aa4.15□□□□□ -1.75
LSM5-206ENST00000409987 SMCO2A6NFE2 343 aa4.15□□□□□ -1.75
LSM5-206ENST00000409987 A8MXQ7 604 aa4.15□□□□□ -1.75
LSM5-206ENST00000409987 EIF3HO15372 352 aaKnown RBP eCLIP4.15□□□□□ -1.75
LSM5-206ENST00000409987 RGS16O15492 202 aaPredicted RBP4.15□□□□□ -1.75
LSM5-206ENST00000409987 IGHG1P01857 330 aa4.15□□□□□ -1.75
LSM5-206ENST00000409987 P04436 131 aa4.15□□□□□ -1.75
LSM5-206ENST00000409987 EIF2S2P20042 333 aaKnown RBP4.15□□□□□ -1.75
LSM5-206ENST00000409987 ZNF10P21506 573 aaPredicted RBP4.15□□□□□ -1.75
LSM5-206ENST00000409987 CALML3P27482 149 aa4.15□□□□□ -1.75
LSM5-206ENST00000409987 PRDX3P30048 256 aaKnown RBP4.15□□□□□ -1.75
LSM5-206ENST00000409987 YWHABP31946 246 aaKnown RBP4.15□□□□□ -1.75
LSM5-206ENST00000409987 RORAP35398 523 aa4.15□□□□□ -1.75
LSM5-206ENST00000409987 HLCSP50747 726 aa4.15□□□□□ -1.75
LSM5-206ENST00000409987 SRPXP78539 464 aa4.15□□□□□ -1.75
LSM5-206ENST00000409987 XRCC4Q13426 336 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms