RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 ZNF175Q9Y473 711 aa26.3■■□□□ 1.8
USP42-202ENST00000404008 TENM4Q6N022 2769 aa26.3■■□□□ 1.8
USP42-202ENST00000404008 RAP2AP10114 183 aa26.29■■□□□ 1.8
USP42-202ENST00000404008 PTNP21246 168 aa26.29■■□□□ 1.8
USP42-202ENST00000404008 IDUAP35475 653 aa26.29■■□□□ 1.8
USP42-202ENST00000404008 ERFP50548 548 aa26.29■■□□□ 1.8
USP42-202ENST00000404008 PON3Q15166 354 aa26.29■■□□□ 1.8
USP42-202ENST00000404008 TTC33Q6PID6 262 aaPredicted RBP26.29■■□□□ 1.8
USP42-202ENST00000404008 SEM1Q6ZVN7 128 aa26.29■■□□□ 1.8
USP42-202ENST00000404008 PIK3C3Q8NEB9 887 aa26.29■■□□□ 1.8
USP42-202ENST00000404008 PTDSS2Q9BVG9 487 aa26.29■■□□□ 1.8
USP42-202ENST00000404008 NMNAT1Q9HAN9 279 aaPredicted RBP26.29■■□□□ 1.8
USP42-202ENST00000404008 SLC22A20A6NK97 555 aa26.28■■□□□ 1.8
USP42-202ENST00000404008 GLI4P10075 376 aa26.28■■□□□ 1.8
USP42-202ENST00000404008 RBM34P42696 430 aaKnown RBP26.28■■□□□ 1.8
USP42-202ENST00000404008 TRAM2Q15035 370 aa26.28■■□□□ 1.8
USP42-202ENST00000404008 ZNF239Q16600 458 aaKnown RBP26.28■■□□□ 1.8
USP42-202ENST00000404008 FNDC9Q8TBE3 224 aa26.28■■□□□ 1.8
USP42-202ENST00000404008 TMEM255BQ8WV15 326 aa26.28■■□□□ 1.8
USP42-202ENST00000404008 WNT2BQ93097 391 aa26.28■■□□□ 1.8
USP42-202ENST00000404008 RAB3IPQ96QF0 476 aaPredicted RBP26.28■■□□□ 1.8
USP42-202ENST00000404008 ZNF347Q96SE7 839 aa26.28■■□□□ 1.8
USP42-202ENST00000404008 MCTS1Q9ULC4 181 aaKnown RBP26.28■■□□□ 1.8
USP42-202ENST00000404008 DOCK7Q96N67 2140 aa26.28■■□□□ 1.8
USP42-202ENST00000404008 TRAV36DV7A0A075B6V5 113 aa26.27■■□□□ 1.8
USP42-202ENST00000404008 MBD3L4A6NDZ8 208 aaPredicted RBP26.27■■□□□ 1.8
USP42-202ENST00000404008 MBD3L3A6NE82 208 aaPredicted RBP26.27■■□□□ 1.8
USP42-202ENST00000404008 MBD3L5A6NJ08 208 aaPredicted RBP26.27■■□□□ 1.8
USP42-202ENST00000404008 LIPT2A6NK58 231 aa26.27■■□□□ 1.8
USP42-202ENST00000404008 AHSA1O95433 338 aa26.27■■□□□ 1.8
USP42-202ENST00000404008 SYNGR4O95473 234 aa26.27■■□□□ 1.8
USP42-202ENST00000404008 TGM6O95932 706 aa26.27■■□□□ 1.8
USP42-202ENST00000404008 MT-ND1P03886 318 aa26.27■■□□□ 1.8
USP42-202ENST00000404008 RPS5P46782 204 aaKnown RBP26.27■■□□□ 1.8
USP42-202ENST00000404008 FOXD4Q12950 439 aaPredicted RBP26.27■■□□□ 1.8
USP42-202ENST00000404008 CCNIQ14094 377 aa26.27■■□□□ 1.8
USP42-202ENST00000404008 MBD3L2Q8NHZ7 208 aaPredicted RBP26.27■■□□□ 1.8
USP42-202ENST00000404008 DHRS1Q96LJ7 313 aa26.27■■□□□ 1.8
USP42-202ENST00000404008 EPYCQ99645 322 aa26.27■■□□□ 1.8
USP42-202ENST00000404008 SLC19A3Q9BZV2 496 aa26.27■■□□□ 1.8
USP42-202ENST00000404008 ANKRD19PQ9H560 264 aa26.27■■□□□ 1.8
USP42-202ENST00000404008 AURKCQ9UQB9 309 aa26.27■■□□□ 1.8
USP42-202ENST00000404008 DNPH1O43598 174 aa26.26■■□□□ 1.79
USP42-202ENST00000404008 H1F0P07305 194 aaKnown RBP26.26■■□□□ 1.79
USP42-202ENST00000404008 NQO1P15559 274 aaKnown RBP26.26■■□□□ 1.79
USP42-202ENST00000404008 HOXB6P17509 224 aaKnown RBP26.26■■□□□ 1.79
USP42-202ENST00000404008 NUP107P57740 925 aa26.26■■□□□ 1.79
USP42-202ENST00000404008 OR2B6P58173 313 aa26.26■■□□□ 1.79
USP42-202ENST00000404008 PMPCAQ10713 525 aa26.26■■□□□ 1.79
USP42-202ENST00000404008 TMEM211Q6ICI0 200 aa26.26■■□□□ 1.79
USP42-202ENST00000404008 NCCRP1Q6ZVX7 275 aaPredicted RBP26.26■■□□□ 1.79
USP42-202ENST00000404008 TMEM239Q8WW34 195 aa26.26■■□□□ 1.79
USP42-202ENST00000404008 TAAR8Q969N4 342 aa26.26■■□□□ 1.79
USP42-202ENST00000404008 RSRC1Q96IZ7 334 aaKnown RBP26.26■■□□□ 1.79
USP42-202ENST00000404008 HS6ST2Q96MM7 605 aa26.26■■□□□ 1.79
USP42-202ENST00000404008 SLC5A6Q9Y289 635 aa26.26■■□□□ 1.79
USP42-202ENST00000404008 TESMINQ9Y4I5 508 aa26.26■■□□□ 1.79
USP42-202ENST00000404008 A0A1W2PRQ8 180 aa26.25■■□□□ 1.79
USP42-202ENST00000404008 FTCDNL1E5RQL4 147 aa26.25■■□□□ 1.79
USP42-202ENST00000404008 TIMP3P35625 211 aa26.25■■□□□ 1.79
USP42-202ENST00000404008 UGT2B15P54855 530 aa26.25■■□□□ 1.79
USP42-202ENST00000404008 SLC35A1P78382 337 aa26.25■■□□□ 1.79
USP42-202ENST00000404008 DGCR6Q14129 220 aa26.25■■□□□ 1.79
USP42-202ENST00000404008 OR7A5Q15622 319 aa26.25■■□□□ 1.79
USP42-202ENST00000404008 PPP4R4Q6NUP7 873 aa26.25■■□□□ 1.79
USP42-202ENST00000404008 C9orf106Q8NAJ2 232 aa26.25■■□□□ 1.79
USP42-202ENST00000404008 MFSD8Q8NHS3 518 aa26.25■■□□□ 1.79
USP42-202ENST00000404008 TM9SF2Q99805 663 aa26.25■■□□□ 1.79
USP42-202ENST00000404008 CHID1Q9BWS9 393 aa26.25■■□□□ 1.79
USP42-202ENST00000404008 MED12LQ86YW9 2145 aa26.25■■□□□ 1.79
USP42-202ENST00000404008 OR2T1O43869 369 aa26.24■■□□□ 1.79
USP42-202ENST00000404008 AQP8O94778 261 aa26.24■■□□□ 1.79
USP42-202ENST00000404008 TOXO94900 526 aa26.24■■□□□ 1.79
USP42-202ENST00000404008 FCGR2AP12318 317 aa26.24■■□□□ 1.79
USP42-202ENST00000404008 FPR1P21462 350 aa26.24■■□□□ 1.79
USP42-202ENST00000404008 ENPP1P22413 925 aa26.24■■□□□ 1.79
USP42-202ENST00000404008 AGFG1P52594 562 aaKnown RBP26.24■■□□□ 1.79
USP42-202ENST00000404008 FAM69AQ5T7M9 428 aa26.24■■□□□ 1.79
USP42-202ENST00000404008 P4HA3Q7Z4N8 544 aa26.24■■□□□ 1.79
USP42-202ENST00000404008 OR6S1Q8NH40 331 aa26.24■■□□□ 1.79
USP42-202ENST00000404008 ROBO4Q8WZ75 1007 aa26.24■■□□□ 1.79
USP42-202ENST00000404008 SLCO4A1Q96BD0 722 aa26.24■■□□□ 1.79
USP42-202ENST00000404008 TAPBPLQ9BX59 468 aa26.24■■□□□ 1.79
USP42-202ENST00000404008 MEPEQ9NQ76 525 aaPredicted RBP26.24■■□□□ 1.79
USP42-202ENST00000404008 CCM2LQ9NUG4 571 aaPredicted RBP26.24■■□□□ 1.79
USP42-202ENST00000404008 MYO7BQ6PIF6 2116 aa26.24■■□□□ 1.79
USP42-202ENST00000404008 IGHV3-15A0A0B4J1V0 119 aa26.23■■□□□ 1.79
USP42-202ENST00000404008 KPNA4O00629 521 aaPredicted RBP26.23■■□□□ 1.79
USP42-202ENST00000404008 SMAD9O15198 467 aaKnown RBP26.23■■□□□ 1.79
USP42-202ENST00000404008 FZD7O75084 574 aa26.23■■□□□ 1.79
USP42-202ENST00000404008 KLK2P20151 261 aa26.23■■□□□ 1.79
USP42-202ENST00000404008 H3F3AP84243 136 aa26.23■■□□□ 1.79
USP42-202ENST00000404008 SPIBQ01892 262 aa26.23■■□□□ 1.79
USP42-202ENST00000404008 PAPD5Q8NDF8 572 aaKnown RBP26.23■■□□□ 1.79
USP42-202ENST00000404008 SLC7A13Q8TCU3 470 aa26.23■■□□□ 1.79
USP42-202ENST00000404008 RNF128Q8TEB7 428 aa26.23■■□□□ 1.79
USP42-202ENST00000404008 ACOT11Q8WXI4 607 aaPredicted RBP26.23■■□□□ 1.79
USP42-202ENST00000404008 ZHX1-C8orf76Q96EF9 292 aa26.23■■□□□ 1.79
USP42-202ENST00000404008 CCDC120Q96HB5 630 aa26.23■■□□□ 1.79
USP42-202ENST00000404008 PRRG4Q9BZD6 226 aa26.23■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms