RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 BIN3Q9NQY0 253 aa15.77■□□□□ 0.11
PTPRA-205ENST00000399903 TRBV2A0A0J9YWF9 115 aa15.76■□□□□ 0.11
PTPRA-205ENST00000399903 ECDO95905 644 aaPredicted RBP15.76■□□□□ 0.11
PTPRA-205ENST00000399903 EDNRAP25101 427 aa15.76■□□□□ 0.11
PTPRA-205ENST00000399903 SOX2P48431 317 aa15.76■□□□□ 0.11
PTPRA-205ENST00000399903 PTH2RP49190 550 aa15.76■□□□□ 0.11
PTPRA-205ENST00000399903 PRR5P85299 388 aa15.76■□□□□ 0.11
PTPRA-205ENST00000399903 PRAMEF14Q5SWL7 426 aa15.76■□□□□ 0.11
PTPRA-205ENST00000399903 RAB11FIP2Q7L804 512 aa15.76■□□□□ 0.11
PTPRA-205ENST00000399903 TMPRSS9Q7Z410 1059 aa15.76■□□□□ 0.11
PTPRA-205ENST00000399903 SYNPRQ8TBG9 265 aa15.76■□□□□ 0.11
PTPRA-205ENST00000399903 CAPN10Q9HC96 672 aa15.76■□□□□ 0.11
PTPRA-205ENST00000399903 EXOSC3Q9NQT5 275 aaKnown RBP15.76■□□□□ 0.11
PTPRA-205ENST00000399903 WBP1LQ9NX94 342 aa15.76■□□□□ 0.11
PTPRA-205ENST00000399903 PPIL1Q9Y3C6 166 aa15.76■□□□□ 0.11
PTPRA-205ENST00000399903 FAM25EA8MYX2 175 aa15.76■□□□□ 0.11
PTPRA-205ENST00000399903 NPC1O15118 1278 aa15.76■□□□□ 0.11
PTPRA-205ENST00000399903 OR1F1O43749 312 aa15.76■□□□□ 0.11
PTPRA-205ENST00000399903 FCMRO60667 390 aa15.76■□□□□ 0.11
PTPRA-205ENST00000399903 SPP1P10451 314 aa15.76■□□□□ 0.11
PTPRA-205ENST00000399903 ODF4Q2M2E3 257 aa15.76■□□□□ 0.11
PTPRA-205ENST00000399903 PAN3Q58A45 887 aaKnown RBP15.76■□□□□ 0.11
PTPRA-205ENST00000399903 PABPC1L2AQ5JQF8 200 aa15.76■□□□□ 0.11
PTPRA-205ENST00000399903 RAB12Q6IQ22 244 aa15.76■□□□□ 0.11
PTPRA-205ENST00000399903 ZNF546Q86UE3 836 aa15.76■□□□□ 0.11
PTPRA-205ENST00000399903 THAP6Q8TBB0 222 aa15.76■□□□□ 0.11
PTPRA-205ENST00000399903 SNX33Q8WV41 574 aa15.76■□□□□ 0.11
PTPRA-205ENST00000399903 ARRDC3Q96B67 414 aa15.76■□□□□ 0.11
PTPRA-205ENST00000399903 SLC41A3Q96GZ6 507 aa15.76■□□□□ 0.11
PTPRA-205ENST00000399903 CTSFQ9UBX1 484 aa15.76■□□□□ 0.11
PTPRA-205ENST00000399903 TRAV27A0A087WT01 109 aa15.76■□□□□ 0.11
PTPRA-205ENST00000399903 TBC1D3BA6NDS4 549 aa15.76■□□□□ 0.11
PTPRA-205ENST00000399903 LATO43561 262 aa15.76■□□□□ 0.11
PTPRA-205ENST00000399903 HPP00738 406 aa15.76■□□□□ 0.11
PTPRA-205ENST00000399903 GKN3PP0CG01 181 aa15.76■□□□□ 0.11
PTPRA-205ENST00000399903 VSIG10L2P0DP72 767 aa15.76■□□□□ 0.11
PTPRA-205ENST00000399903 TEAD1P28347 426 aa15.76■□□□□ 0.11
PTPRA-205ENST00000399903 FAM78AQ5JUQ0 283 aa15.76■□□□□ 0.11
PTPRA-205ENST00000399903 NDUFAF7Q7L592 441 aa15.76■□□□□ 0.11
PTPRA-205ENST00000399903 PUSL1Q8N0Z8 303 aaKnown RBP15.76■□□□□ 0.11
PTPRA-205ENST00000399903 C12orf45Q8N5I9 185 aaPredicted RBP15.76■□□□□ 0.11
PTPRA-205ENST00000399903 OR5T2Q8NGG2 359 aa15.76■□□□□ 0.11
PTPRA-205ENST00000399903 OR4D10Q8NGI6 311 aa15.76■□□□□ 0.11
PTPRA-205ENST00000399903 DVL3Q92997 716 aaPredicted RBP15.76■□□□□ 0.11
PTPRA-205ENST00000399903 AKAP7Q9P0M2 348 aaPredicted RBP15.76■□□□□ 0.11
PTPRA-205ENST00000399903 ZMIZ1Q9ULJ6 1067 aa15.76■□□□□ 0.11
PTPRA-205ENST00000399903 MOKQ9UQ07 419 aa15.76■□□□□ 0.11
PTPRA-205ENST00000399903 KHKP50053 298 aa15.75■□□□□ 0.11
PTPRA-205ENST00000399903 BLOC1S1P78537 153 aa15.75■□□□□ 0.11
PTPRA-205ENST00000399903 LTB4RQ15722 352 aa15.75■□□□□ 0.11
PTPRA-205ENST00000399903 PCGF3Q3KNV8 242 aa15.75■□□□□ 0.11
PTPRA-205ENST00000399903 FBXO46Q6PJ61 603 aaPredicted RBP15.75■□□□□ 0.11
PTPRA-205ENST00000399903 PFN4Q8NHR9 129 aa15.75■□□□□ 0.11
PTPRA-205ENST00000399903 FBXO17Q96EF6 278 aa15.75■□□□□ 0.11
PTPRA-205ENST00000399903 PEX11GQ96HA9 241 aa15.75■□□□□ 0.11
PTPRA-205ENST00000399903 ZNF559Q9BR84 538 aa15.75■□□□□ 0.11
PTPRA-205ENST00000399903 PDCD10Q9BUL8 212 aa15.75■□□□□ 0.11
PTPRA-205ENST00000399903 TINAGL1Q9GZM7 467 aaPredicted RBP15.75■□□□□ 0.11
PTPRA-205ENST00000399903 NOX4Q9NPH5 578 aa15.75■□□□□ 0.11
PTPRA-205ENST00000399903 TM7SF3Q9NS93 570 aa15.75■□□□□ 0.11
PTPRA-205ENST00000399903 TAS2R5Q9NYW4 299 aa15.75■□□□□ 0.11
PTPRA-205ENST00000399903 PLXNB3Q9ULL4 1909 aa15.75■□□□□ 0.11
PTPRA-205ENST00000399903 GNB5O14775 395 aa15.75■□□□□ 0.11
PTPRA-205ENST00000399903 S100A9P06702 114 aaKnown RBP15.75■□□□□ 0.11
PTPRA-205ENST00000399903 MST1P26927 711 aa15.75■□□□□ 0.11
PTPRA-205ENST00000399903 RPS15P62841 145 aaKnown RBP15.75■□□□□ 0.11
PTPRA-205ENST00000399903 RBMS2Q15434 407 aaKnown RBP15.75■□□□□ 0.11
PTPRA-205ENST00000399903 TAF13Q15543 124 aa15.75■□□□□ 0.11
PTPRA-205ENST00000399903 TMEM44Q2T9K0 475 aa15.75■□□□□ 0.11
PTPRA-205ENST00000399903 HFEQ30201 348 aa15.75■□□□□ 0.11
PTPRA-205ENST00000399903 KHDRBS2Q5VWX1 349 aaKnown RBP15.75■□□□□ 0.11
PTPRA-205ENST00000399903 GID4Q8IVV7 300 aa15.75■□□□□ 0.11
PTPRA-205ENST00000399903 OR9A1PQ8NGU1 263 aa15.75■□□□□ 0.11
PTPRA-205ENST00000399903 SUN3Q8TAQ9 357 aa15.75■□□□□ 0.11
PTPRA-205ENST00000399903 ACOT11Q8WXI4 607 aaPredicted RBP15.75■□□□□ 0.11
PTPRA-205ENST00000399903 TEAD3Q99594 435 aa15.75■□□□□ 0.11
PTPRA-205ENST00000399903 NKX3-1Q99801 234 aaPredicted RBP15.75■□□□□ 0.11
PTPRA-205ENST00000399903 NIT2Q9NQR4 276 aa15.75■□□□□ 0.11
PTPRA-205ENST00000399903 ABRACLQ9P1F3 81 aa15.75■□□□□ 0.11
PTPRA-205ENST00000399903 ZNF230Q9UIE0 474 aaPredicted RBP15.75■□□□□ 0.11
PTPRA-205ENST00000399903 NPFFR2Q9Y5X5 522 aa15.75■□□□□ 0.11
PTPRA-205ENST00000399903 FAM86C2PA6NEL3 165 aa15.74■□□□□ 0.11
PTPRA-205ENST00000399903 RPP14O95059 124 aaKnown RBP15.74■□□□□ 0.11
PTPRA-205ENST00000399903 GPR1P46091 355 aa15.74■□□□□ 0.11
PTPRA-205ENST00000399903 ACSM1Q08AH1 577 aa15.74■□□□□ 0.11
PTPRA-205ENST00000399903 MAPK14Q16539 360 aa15.74■□□□□ 0.11
PTPRA-205ENST00000399903 ZNF626Q68DY1 528 aa15.74■□□□□ 0.11
PTPRA-205ENST00000399903 TSSK4Q6SA08 328 aa15.74■□□□□ 0.11
PTPRA-205ENST00000399903 GDF7Q7Z4P5 450 aa15.74■□□□□ 0.11
PTPRA-205ENST00000399903 DNAAF1Q8NEP3 725 aa15.74■□□□□ 0.11
PTPRA-205ENST00000399903 SEC22AQ96IW7 307 aa15.74■□□□□ 0.11
PTPRA-205ENST00000399903 TIMP4Q99727 224 aa15.74■□□□□ 0.11
PTPRA-205ENST00000399903 IL20Q9NYY1 176 aa15.74■□□□□ 0.11
PTPRA-205ENST00000399903 CARNS1A5YM72 827 aa15.74■□□□□ 0.11
PTPRA-205ENST00000399903 ARL6IP5O75915 188 aa15.74■□□□□ 0.11
PTPRA-205ENST00000399903 CISD3P0C7P0 127 aa15.74■□□□□ 0.11
PTPRA-205ENST00000399903 NTSP30990 170 aa15.74■□□□□ 0.11
PTPRA-205ENST00000399903 MAT1AQ00266 395 aaKnown RBP15.74■□□□□ 0.11
PTPRA-205ENST00000399903 CRMP1Q14194 572 aa15.74■□□□□ 0.11
PTPRA-205ENST00000399903 MANEAQ5SRI9 462 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms