RNA–Protein interactions for RNA: ENST00000392334.6

CSNK1D-203, Transcript of casein kinase 1 delta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1D, Length 2,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-203ENST00000392334 OR5M3Q8NGP4 307 aa18.25■□□□□ 0.51
CSNK1D-203ENST00000392334 BRIX1Q8TDN6 353 aaKnown RBP18.25■□□□□ 0.51
CSNK1D-203ENST00000392334 RIT1Q92963 219 aa18.25■□□□□ 0.51
CSNK1D-203ENST00000392334 KRCC1Q9NPI7 259 aaPredicted RBP18.25■□□□□ 0.51
CSNK1D-203ENST00000392334 NTMQ9P121 344 aa18.25■□□□□ 0.51
CSNK1D-203ENST00000392334 SEC16AO15027 2179 aa18.25■□□□□ 0.51
CSNK1D-203ENST00000392334 C2orf92A0A1B0GVN3 265 aa18.25■□□□□ 0.51
CSNK1D-203ENST00000392334 INMT-MINDY4F8WBC2 141 aa18.25■□□□□ 0.51
CSNK1D-203ENST00000392334 GPR4P46093 362 aa18.25■□□□□ 0.51
CSNK1D-203ENST00000392334 DUSP3P51452 185 aaPredicted RBP18.25■□□□□ 0.51
CSNK1D-203ENST00000392334 PDX1P52945 283 aa18.25■□□□□ 0.51
CSNK1D-203ENST00000392334 ATP12AP54707 1039 aa18.25■□□□□ 0.51
CSNK1D-203ENST00000392334 CTBP2P56545 445 aa18.25■□□□□ 0.51
CSNK1D-203ENST00000392334 SQSTM1Q13501 440 aa18.25■□□□□ 0.51
CSNK1D-203ENST00000392334 BICRALQ6AI39 1079 aa18.25■□□□□ 0.51
CSNK1D-203ENST00000392334 CXXC5Q7LFL8 322 aaKnown RBP18.25■□□□□ 0.51
CSNK1D-203ENST00000392334 NAXDQ8IW45 347 aa18.25■□□□□ 0.51
CSNK1D-203ENST00000392334 SIRT6Q8N6T7 355 aa18.25■□□□□ 0.51
CSNK1D-203ENST00000392334 DEDD2Q8WXF8 326 aa18.25■□□□□ 0.51
CSNK1D-203ENST00000392334 AKAP1Q92667 903 aaKnown RBP eCLIP18.25■□□□□ 0.519e-12■■■■□ 22.6
CSNK1D-203ENST00000392334 PTCHD1Q96NR3 888 aa18.25■□□□□ 0.51
CSNK1D-203ENST00000392334 GFM1Q96RP9 751 aaKnown RBP18.25■□□□□ 0.51
CSNK1D-203ENST00000392334 FOLH1BQ9HBA9 442 aa18.25■□□□□ 0.51
CSNK1D-203ENST00000392334 ZNF304Q9HCX3 659 aa18.25■□□□□ 0.51
CSNK1D-203ENST00000392334 BABAM2Q9NXR7 383 aa18.25■□□□□ 0.51
CSNK1D-203ENST00000392334 DUXAA6NLW8 204 aa18.24■□□□□ 0.51
CSNK1D-203ENST00000392334 SOCS6O14544 535 aa18.24■□□□□ 0.51
CSNK1D-203ENST00000392334 TOX3O15405 576 aaPredicted RBP18.24■□□□□ 0.51
CSNK1D-203ENST00000392334 PLOD3O60568 738 aa18.24■□□□□ 0.51
CSNK1D-203ENST00000392334 AGR2O95994 175 aa18.24■□□□□ 0.51
CSNK1D-203ENST00000392334 SLC6A1P30531 599 aa18.24■□□□□ 0.51
CSNK1D-203ENST00000392334 RFX3P48380 749 aa18.24■□□□□ 0.51
CSNK1D-203ENST00000392334 DUSP8Q13202 625 aa18.24■□□□□ 0.51
CSNK1D-203ENST00000392334 INSL4Q14641 139 aa18.24■□□□□ 0.51
CSNK1D-203ENST00000392334 CCDC157Q569K6 752 aa18.24■□□□□ 0.51
CSNK1D-203ENST00000392334 CDC73Q6P1J9 531 aa18.24■□□□□ 0.51
CSNK1D-203ENST00000392334 SHISA6Q6ZSJ9 500 aa18.24■□□□□ 0.51
CSNK1D-203ENST00000392334 ACBD7Q8N6N7 88 aa18.24■□□□□ 0.51
CSNK1D-203ENST00000392334 SLC38A9Q8NBW4 561 aa18.24■□□□□ 0.51
CSNK1D-203ENST00000392334 DGAT2Q96PD7 388 aa18.24■□□□□ 0.51
CSNK1D-203ENST00000392334 APMAPQ9HDC9 416 aa18.24■□□□□ 0.51
CSNK1D-203ENST00000392334 MCUBQ9NWR8 336 aa18.24■□□□□ 0.51
CSNK1D-203ENST00000392334 EXTL2Q9UBQ6 330 aa18.24■□□□□ 0.51
CSNK1D-203ENST00000392334 ZNF443Q9Y2A4 671 aaPredicted RBP18.24■□□□□ 0.51
CSNK1D-203ENST00000392334 A0A0G2JMP0 313 aa18.23■□□□□ 0.51
CSNK1D-203ENST00000392334 A8MUA0 341 aa18.23■□□□□ 0.51
CSNK1D-203ENST00000392334 PIP5K1CO60331 668 aa18.23■□□□□ 0.51
CSNK1D-203ENST00000392334 CBX7O95931 251 aa18.23■□□□□ 0.51
CSNK1D-203ENST00000392334 ATP6V1E1P36543 226 aa18.23■□□□□ 0.51
CSNK1D-203ENST00000392334 ZNF267Q14586 743 aaPredicted RBP18.23■□□□□ 0.51
CSNK1D-203ENST00000392334 CCDC58Q4VC31 144 aa18.23■□□□□ 0.51
CSNK1D-203ENST00000392334 HACD4Q5VWC8 232 aa18.23■□□□□ 0.51
CSNK1D-203ENST00000392334 ZNF57Q68EA5 555 aaPredicted RBP18.23■□□□□ 0.51
CSNK1D-203ENST00000392334 LAMTOR1Q6IAA8 161 aa18.23■□□□□ 0.51
CSNK1D-203ENST00000392334 FRRS1Q6ZNA5 592 aa18.23■□□□□ 0.51
CSNK1D-203ENST00000392334 CPOQ8IVL8 374 aa18.23■□□□□ 0.51
CSNK1D-203ENST00000392334 TMEM255BQ8WV15 326 aa18.23■□□□□ 0.51
CSNK1D-203ENST00000392334 CTHRC1Q96CG8 243 aa18.23■□□□□ 0.51
CSNK1D-203ENST00000392334 CLIP3Q96DZ5 547 aa18.23■□□□□ 0.51
CSNK1D-203ENST00000392334 UBQLN3Q9H347 655 aa18.23■□□□□ 0.51
CSNK1D-203ENST00000392334 LANCL2Q9NS86 450 aa18.23■□□□□ 0.51
CSNK1D-203ENST00000392334 OCIAD1Q9NX40 245 aa18.23■□□□□ 0.51
CSNK1D-203ENST00000392334 COL5A1P20908 1838 aaPredicted RBP18.23■□□□□ 0.51
CSNK1D-203ENST00000392334 ADAMTS20P59510 1910 aa18.23■□□□□ 0.51
CSNK1D-203ENST00000392334 SLC2A10O95528 541 aa18.23■□□□□ 0.51
CSNK1D-203ENST00000392334 FBLP22087 321 aaKnown RBP18.23■□□□□ 0.51
CSNK1D-203ENST00000392334 RBMS1P29558 406 aaKnown RBP18.23■□□□□ 0.51
CSNK1D-203ENST00000392334 HTR2BP41595 481 aa18.23■□□□□ 0.51
CSNK1D-203ENST00000392334 GCGRP47871 477 aa18.23■□□□□ 0.51
CSNK1D-203ENST00000392334 AGFG1P52594 562 aaKnown RBP18.23■□□□□ 0.51
CSNK1D-203ENST00000392334 TRAM1Q15629 374 aa18.23■□□□□ 0.51
CSNK1D-203ENST00000392334 PLA1AQ53H76 456 aa18.23■□□□□ 0.51
CSNK1D-203ENST00000392334 ARHGAP40Q5TG30 622 aa18.23■□□□□ 0.51
CSNK1D-203ENST00000392334 PWWP2BQ6NUJ5 590 aa18.23■□□□□ 0.51
CSNK1D-203ENST00000392334 NIPAL3Q6P499 406 aa18.23■□□□□ 0.51
CSNK1D-203ENST00000392334 NR2C2APQ86WQ0 139 aa18.23■□□□□ 0.51
CSNK1D-203ENST00000392334 TMEM151BQ8IW70 566 aa18.23■□□□□ 0.51
CSNK1D-203ENST00000392334 ANGPTL6Q8NI99 470 aa18.23■□□□□ 0.51
CSNK1D-203ENST00000392334 TSLPQ969D9 159 aa18.23■□□□□ 0.51
CSNK1D-203ENST00000392334 SAMD8Q96LT4 415 aa18.23■□□□□ 0.51
CSNK1D-203ENST00000392334 TIMP4Q99727 224 aa18.23■□□□□ 0.51
CSNK1D-203ENST00000392334 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.23■□□□□ 0.515e-10■■■■■ 29.3
CSNK1D-203ENST00000392334 MTHFD2LQ9H903 347 aaPredicted RBP18.23■□□□□ 0.51
CSNK1D-203ENST00000392334 INPP5EQ9NRR6 644 aa18.23■□□□□ 0.51
CSNK1D-203ENST00000392334 MRPL39Q9NYK5 338 aaKnown RBP18.23■□□□□ 0.51
CSNK1D-203ENST00000392334 NTNG1Q9Y2I2 539 aa18.23■□□□□ 0.51
CSNK1D-203ENST00000392334 PCNX2A6NKB5 2137 aa18.22■□□□□ 0.51
CSNK1D-203ENST00000392334 A0A087WV62 115 aa18.22■□□□□ 0.51
CSNK1D-203ENST00000392334 A0A1B0GX78 115 aa18.22■□□□□ 0.51
CSNK1D-203ENST00000392334 DLL1O00548 723 aa18.22■□□□□ 0.51
CSNK1D-203ENST00000392334 S1PR1P21453 382 aa18.22■□□□□ 0.51
CSNK1D-203ENST00000392334 ACP1P24666 158 aa18.22■□□□□ 0.51
CSNK1D-203ENST00000392334 EFNA3P52797 238 aa18.22■□□□□ 0.51
CSNK1D-203ENST00000392334 HSD17B7P56937 341 aa18.22■□□□□ 0.51
CSNK1D-203ENST00000392334 GPR176Q14439 515 aa18.22■□□□□ 0.51
CSNK1D-203ENST00000392334 MEPCEQ7L2J0 689 aaKnown RBP18.22■□□□□ 0.51
CSNK1D-203ENST00000392334 CADM2Q8N3J6 435 aa18.22■□□□□ 0.51
CSNK1D-203ENST00000392334 HYLS1Q96M11 299 aa18.22■□□□□ 0.51
CSNK1D-203ENST00000392334 WACQ9BTA9 647 aa18.22■□□□□ 0.51
CSNK1D-203ENST00000392334 ISG20L2Q9H9L3 353 aaKnown RBP18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms