RNA–Protein interactions for RNA: ENST00000392246.6

SUMO1-203, Transcript of small ubiquitin-like modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUMO1, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-203ENST00000392246 SRXN1Q9BYN0 137 aa13.37□□□□□ -0.27
SUMO1-203ENST00000392246 PRRG4Q9BZD6 226 aa13.37□□□□□ -0.27
SUMO1-203ENST00000392246 RHCGQ9UBD6 479 aa13.37□□□□□ -0.27
SUMO1-203ENST00000392246 DIDO1Q9BTC0 2240 aaKnown RBP13.37□□□□□ -0.27
SUMO1-203ENST00000392246 TRAV36DV7A0A075B6V5 113 aa13.36□□□□□ -0.27
SUMO1-203ENST00000392246 DHRS12A0PJE2 317 aa13.36□□□□□ -0.27
SUMO1-203ENST00000392246 MBD3L4A6NDZ8 208 aaPredicted RBP13.36□□□□□ -0.27
SUMO1-203ENST00000392246 MBD3L3A6NE82 208 aaPredicted RBP13.36□□□□□ -0.27
SUMO1-203ENST00000392246 MBD3L5A6NJ08 208 aaPredicted RBP13.36□□□□□ -0.27
SUMO1-203ENST00000392246 DNPH1O43598 174 aa13.36□□□□□ -0.27
SUMO1-203ENST00000392246 OR2T1O43869 369 aa13.36□□□□□ -0.27
SUMO1-203ENST00000392246 PRSS23O95084 383 aa13.36□□□□□ -0.27
SUMO1-203ENST00000392246 TGM6O95932 706 aa13.36□□□□□ -0.27
SUMO1-203ENST00000392246 IL2RAP01589 272 aa13.36□□□□□ -0.27
SUMO1-203ENST00000392246 GPIP06744 558 aa13.36□□□□□ -0.27
SUMO1-203ENST00000392246 IMPDH2P12268 514 aa13.36□□□□□ -0.27
SUMO1-203ENST00000392246 FCGR2AP12318 317 aa13.36□□□□□ -0.27
SUMO1-203ENST00000392246 HOXB6P17509 224 aaKnown RBP13.36□□□□□ -0.27
SUMO1-203ENST00000392246 RBM34P42696 430 aaKnown RBP13.36□□□□□ -0.27
SUMO1-203ENST00000392246 PER3P56645 1201 aa13.36□□□□□ -0.27
SUMO1-203ENST00000392246 NUP107P57740 925 aa13.36□□□□□ -0.27
SUMO1-203ENST00000392246 OR2B6P58173 313 aa13.36□□□□□ -0.27
SUMO1-203ENST00000392246 SLC35A1P78382 337 aa13.36□□□□□ -0.27
SUMO1-203ENST00000392246 TRAM2Q15035 370 aa13.36□□□□□ -0.27
SUMO1-203ENST00000392246 ZNF239Q16600 458 aaKnown RBP13.36□□□□□ -0.27
SUMO1-203ENST00000392246 LSRQ86X29 649 aaPredicted RBP13.36□□□□□ -0.27
SUMO1-203ENST00000392246 NKAIN4Q8IVV8 208 aa13.36□□□□□ -0.27
SUMO1-203ENST00000392246 MARVELD2Q8N4S9 558 aa13.36□□□□□ -0.27
SUMO1-203ENST00000392246 MBD3L2Q8NHZ7 208 aaPredicted RBP13.36□□□□□ -0.27
SUMO1-203ENST00000392246 FNDC9Q8TBE3 224 aa13.36□□□□□ -0.27
SUMO1-203ENST00000392246 RND1Q92730 232 aa13.36□□□□□ -0.27
SUMO1-203ENST00000392246 ZHX1-C8orf76Q96EF9 292 aa13.36□□□□□ -0.27
SUMO1-203ENST00000392246 KTI12Q96EK9 354 aaPredicted RBP13.36□□□□□ -0.27
SUMO1-203ENST00000392246 HS6ST2Q96MM7 605 aa13.36□□□□□ -0.27
SUMO1-203ENST00000392246 ZNF347Q96SE7 839 aa13.36□□□□□ -0.27
SUMO1-203ENST00000392246 PIP5K1AQ99755 562 aa13.36□□□□□ -0.27
SUMO1-203ENST00000392246 TAPBPLQ9BX59 468 aa13.36□□□□□ -0.27
SUMO1-203ENST00000392246 SLC19A3Q9BZV2 496 aa13.36□□□□□ -0.27
SUMO1-203ENST00000392246 NMNAT1Q9HAN9 279 aaPredicted RBP13.36□□□□□ -0.27
SUMO1-203ENST00000392246 PCNX1Q96RV3 2341 aa13.36□□□□□ -0.27
SUMO1-203ENST00000392246 TCRBV3S1A0A5B6 114 aa13.35□□□□□ -0.27
SUMO1-203ENST00000392246 LIPT2A6NK58 231 aa13.35□□□□□ -0.27
SUMO1-203ENST00000392246 EIF1BO60739 113 aaKnown RBP13.35□□□□□ -0.27
SUMO1-203ENST00000392246 DIRAS1O95057 198 aa13.35□□□□□ -0.27
SUMO1-203ENST00000392246 RAP2AP10114 183 aa13.35□□□□□ -0.27
SUMO1-203ENST00000392246 FPR1P21462 350 aa13.35□□□□□ -0.27
SUMO1-203ENST00000392246 ENPP1P22413 925 aa13.35□□□□□ -0.27
SUMO1-203ENST00000392246 MAGEA2P43356 314 aa13.35□□□□□ -0.27
SUMO1-203ENST00000392246 RPS5P46782 204 aaKnown RBP13.35□□□□□ -0.27
SUMO1-203ENST00000392246 AGFG1P52594 562 aaKnown RBP13.35□□□□□ -0.27
SUMO1-203ENST00000392246 FOXD4Q12950 439 aaPredicted RBP13.35□□□□□ -0.27
SUMO1-203ENST00000392246 OR7A5Q15622 319 aa13.35□□□□□ -0.27
SUMO1-203ENST00000392246 FAM69AQ5T7M9 428 aa13.35□□□□□ -0.27
SUMO1-203ENST00000392246 RIPPLY2Q5TAB7 128 aa13.35□□□□□ -0.27
SUMO1-203ENST00000392246 GTF2IRD2BQ6EKJ0 949 aa13.35□□□□□ -0.27
SUMO1-203ENST00000392246 PLXDC2Q6UX71 529 aa13.35□□□□□ -0.27
SUMO1-203ENST00000392246 GTF2IRD2Q86UP8 949 aa13.35□□□□□ -0.27
SUMO1-203ENST00000392246 P3H2Q8IVL5 708 aa13.35□□□□□ -0.27
SUMO1-203ENST00000392246 ADGRG5Q8IZF4 528 aa13.35□□□□□ -0.27
SUMO1-203ENST00000392246 C9orf106Q8NAJ2 232 aa13.35□□□□□ -0.27
SUMO1-203ENST00000392246 PIK3C3Q8NEB9 887 aa13.35□□□□□ -0.27
SUMO1-203ENST00000392246 OR6S1Q8NH40 331 aa13.35□□□□□ -0.27
SUMO1-203ENST00000392246 MFSD8Q8NHS3 518 aa13.35□□□□□ -0.27
SUMO1-203ENST00000392246 CANT1Q8WVQ1 401 aa13.35□□□□□ -0.27
SUMO1-203ENST00000392246 CCDC120Q96HB5 630 aa13.35□□□□□ -0.27
SUMO1-203ENST00000392246 RAB3IPQ96QF0 476 aaPredicted RBP13.35□□□□□ -0.27
SUMO1-203ENST00000392246 PTDSS2Q9BVG9 487 aa13.35□□□□□ -0.27
SUMO1-203ENST00000392246 ANKRD19PQ9H560 264 aa13.35□□□□□ -0.27
SUMO1-203ENST00000392246 ERRFI1Q9UJM3 462 aaPredicted RBP13.35□□□□□ -0.27
SUMO1-203ENST00000392246 AURKCQ9UQB9 309 aa13.35□□□□□ -0.27
SUMO1-203ENST00000392246 A0A1W2PRQ8 180 aa13.34□□□□□ -0.27
SUMO1-203ENST00000392246 AQP8O94778 261 aa13.34□□□□□ -0.27
SUMO1-203ENST00000392246 TOXO94900 526 aa13.34□□□□□ -0.27
SUMO1-203ENST00000392246 RCBTB2O95199 551 aa13.34□□□□□ -0.27
SUMO1-203ENST00000392246 H1F0P07305 194 aaKnown RBP13.34□□□□□ -0.27
SUMO1-203ENST00000392246 PTNP21246 168 aa13.34□□□□□ -0.27
SUMO1-203ENST00000392246 CEACAM8P31997 349 aaPredicted RBP13.34□□□□□ -0.27
SUMO1-203ENST00000392246 SMIM11AP58511 58 aa13.34□□□□□ -0.27
SUMO1-203ENST00000392246 DGCR6Q14129 220 aa13.34□□□□□ -0.27
SUMO1-203ENST00000392246 MFSD13AQ14CX5 517 aa13.34□□□□□ -0.27
SUMO1-203ENST00000392246 OR2A2Q6IF42 318 aa13.34□□□□□ -0.27
SUMO1-203ENST00000392246 NCCRP1Q6ZVX7 275 aaPredicted RBP13.34□□□□□ -0.27
SUMO1-203ENST00000392246 FCRLAQ7L513 359 aa13.34□□□□□ -0.27
SUMO1-203ENST00000392246 SLC43A2Q8N370 569 aa13.34□□□□□ -0.27
SUMO1-203ENST00000392246 TMEM255BQ8WV15 326 aa13.34□□□□□ -0.27
SUMO1-203ENST00000392246 TMEM239Q8WW34 195 aa13.34□□□□□ -0.27
SUMO1-203ENST00000392246 ROBO4Q8WZ75 1007 aa13.34□□□□□ -0.27
SUMO1-203ENST00000392246 TAAR8Q969N4 342 aa13.34□□□□□ -0.27
SUMO1-203ENST00000392246 ZFP3Q96NJ6 502 aa13.34□□□□□ -0.27
SUMO1-203ENST00000392246 NAA11Q9BSU3 229 aaPredicted RBP13.34□□□□□ -0.27
SUMO1-203ENST00000392246 KLHL4Q9C0H6 718 aa13.34□□□□□ -0.27
SUMO1-203ENST00000392246 RNF122Q9H9V4 155 aa13.34□□□□□ -0.27
SUMO1-203ENST00000392246 MAN2C1Q9NTJ4 1040 aa13.34□□□□□ -0.27
SUMO1-203ENST00000392246 NCOA6Q14686 2063 aaPredicted RBP13.34□□□□□ -0.27
SUMO1-203ENST00000392246 HSPB2A8KAH6 182 aa13.34□□□□□ -0.27
SUMO1-203ENST00000392246 MT-ND1P03886 318 aa13.34□□□□□ -0.27
SUMO1-203ENST00000392246 SMSP52788 366 aa13.34□□□□□ -0.27
SUMO1-203ENST00000392246 H3F3AP84243 136 aa13.34□□□□□ -0.27
SUMO1-203ENST00000392246 ADORA2A-AS1P86434 159 aa13.34□□□□□ -0.27
SUMO1-203ENST00000392246 HSPB2Q16082 182 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms