RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 GGTLC2Q14390 218 aa12.04□□□□□ -0.48
CXCL12-202ENST00000374426 PDCD2Q16342 344 aaPredicted RBP12.04□□□□□ -0.48
CXCL12-202ENST00000374426 GPAT3Q53EU6 434 aa12.04□□□□□ -0.48
CXCL12-202ENST00000374426 C1QTNF12Q5T7M4 302 aa12.04□□□□□ -0.48
CXCL12-202ENST00000374426 FAM166AQ6J272 317 aa12.04□□□□□ -0.48
CXCL12-202ENST00000374426 PAQR6Q6TCH4 344 aa12.04□□□□□ -0.48
CXCL12-202ENST00000374426 RIBC1Q8N443 379 aaPredicted RBP12.04□□□□□ -0.48
CXCL12-202ENST00000374426 ZIC4Q8N9L1 334 aa12.04□□□□□ -0.48
CXCL12-202ENST00000374426 PMM1Q92871 262 aa12.04□□□□□ -0.48
CXCL12-202ENST00000374426 TMEM45BQ96B21 275 aa12.04□□□□□ -0.48
CXCL12-202ENST00000374426 DDIT4LQ96D03 193 aa12.04□□□□□ -0.48
CXCL12-202ENST00000374426 MSI2Q96DH6 328 aaKnown RBP12.04□□□□□ -0.48
CXCL12-202ENST00000374426 FBXO17Q96EF6 278 aa12.04□□□□□ -0.48
CXCL12-202ENST00000374426 PPP1R36Q96LQ0 422 aa12.04□□□□□ -0.48
CXCL12-202ENST00000374426 NAA11Q9BSU3 229 aaPredicted RBP12.04□□□□□ -0.48
CXCL12-202ENST00000374426 AKTIPQ9H8T0 292 aa12.04□□□□□ -0.48
CXCL12-202ENST00000374426 CHODLQ9H9P2 273 aa12.04□□□□□ -0.48
CXCL12-202ENST00000374426 LGALS13Q9UHV8 139 aa12.04□□□□□ -0.48
CXCL12-202ENST00000374426 LOC100289279A0A1B0GTE1 492 aa12.03□□□□□ -0.48
CXCL12-202ENST00000374426 AGAP5A6NIR3 686 aa12.03□□□□□ -0.48
CXCL12-202ENST00000374426 NDUFS8O00217 210 aa12.03□□□□□ -0.48
CXCL12-202ENST00000374426 HMGN4O00479 90 aa12.03□□□□□ -0.48
CXCL12-202ENST00000374426 KLF11O14901 512 aa12.03□□□□□ -0.48
CXCL12-202ENST00000374426 ITM2AO43736 263 aa12.03□□□□□ -0.48
CXCL12-202ENST00000374426 NUDT17P0C025 328 aa12.03□□□□□ -0.48
CXCL12-202ENST00000374426 CDH2P19022 906 aaPredicted RBP12.03□□□□□ -0.48
CXCL12-202ENST00000374426 SLC1A3P43003 542 aa12.03□□□□□ -0.48
CXCL12-202ENST00000374426 ETV4P43268 484 aa12.03□□□□□ -0.48
CXCL12-202ENST00000374426 PDLIM4P50479 330 aa12.03□□□□□ -0.48
CXCL12-202ENST00000374426 HPCAP84074 193 aa12.03□□□□□ -0.48
CXCL12-202ENST00000374426 CASP8Q14790 479 aa12.03□□□□□ -0.48
CXCL12-202ENST00000374426 HIKESHIQ53FT3 197 aa12.03□□□□□ -0.48
CXCL12-202ENST00000374426 FAM120AOSQ5T036 256 aa12.03□□□□□ -0.48
CXCL12-202ENST00000374426 ANXA8L1Q5VT79 327 aa12.03□□□□□ -0.48
CXCL12-202ENST00000374426 CMIPQ8IY22 773 aa12.03□□□□□ -0.48
CXCL12-202ENST00000374426 ANKFN1Q8N957 763 aa12.03□□□□□ -0.48
CXCL12-202ENST00000374426 TESCQ96BS2 214 aa12.03□□□□□ -0.48
CXCL12-202ENST00000374426 BOD1Q96IK1 185 aa12.03□□□□□ -0.48
CXCL12-202ENST00000374426 ZIM3Q96PE6 472 aa12.03□□□□□ -0.48
CXCL12-202ENST00000374426 ZNF385AQ96PM9 386 aaKnown RBP12.03□□□□□ -0.48
CXCL12-202ENST00000374426 SLC35A5Q9BS91 424 aa12.03□□□□□ -0.48
CXCL12-202ENST00000374426 PIMREGQ9BSJ6 248 aa12.03□□□□□ -0.48
CXCL12-202ENST00000374426 DPY30Q9C005 99 aa12.03□□□□□ -0.48
CXCL12-202ENST00000374426 SLC38A1Q9H2H9 487 aa12.03□□□□□ -0.48
CXCL12-202ENST00000374426 MARCOQ9UEW3 520 aaPredicted RBP12.03□□□□□ -0.48
CXCL12-202ENST00000374426 KCNS2Q9ULS6 477 aa12.03□□□□□ -0.48
CXCL12-202ENST00000374426 FKBP7Q9Y680 259 aa12.03□□□□□ -0.48
CXCL12-202ENST00000374426 TENM1Q9UKZ4 2725 aa12.03□□□□□ -0.48
CXCL12-202ENST00000374426 IGHV1-18A0A0C4DH31 117 aa12.02□□□□□ -0.49
CXCL12-202ENST00000374426 IGHV4-61A0A0C4DH41 118 aa12.02□□□□□ -0.49
CXCL12-202ENST00000374426 FAAHO00519 579 aa12.02□□□□□ -0.49
CXCL12-202ENST00000374426 TYROBPO43914 113 aa12.02□□□□□ -0.49
CXCL12-202ENST00000374426 WNT11O96014 354 aa12.02□□□□□ -0.49
CXCL12-202ENST00000374426 C8BP07358 591 aa12.02□□□□□ -0.49
CXCL12-202ENST00000374426 CHRM4P08173 479 aa12.02□□□□□ -0.49
CXCL12-202ENST00000374426 CHI3L1P36222 383 aaPredicted RBP12.02□□□□□ -0.49
CXCL12-202ENST00000374426 MAP2K6P52564 334 aa12.02□□□□□ -0.49
CXCL12-202ENST00000374426 SYPL1Q16563 259 aa12.02□□□□□ -0.49
CXCL12-202ENST00000374426 SPANXN4Q5MJ08 99 aa12.02□□□□□ -0.49
CXCL12-202ENST00000374426 OTUD3Q5T2D3 398 aaPredicted RBP12.02□□□□□ -0.49
CXCL12-202ENST00000374426 KLHL24Q6TFL4 600 aa12.02□□□□□ -0.49
CXCL12-202ENST00000374426 TMEM99Q8N816 258 aa12.02□□□□□ -0.49
CXCL12-202ENST00000374426 ZNF781Q8N8C0 355 aa12.02□□□□□ -0.49
CXCL12-202ENST00000374426 ANKS4BQ8N8V4 417 aa12.02□□□□□ -0.49
CXCL12-202ENST00000374426 POMGNT2Q8NAT1 580 aa12.02□□□□□ -0.49
CXCL12-202ENST00000374426 VPS37AQ8NEZ2 397 aa12.02□□□□□ -0.49
CXCL12-202ENST00000374426 OR9K2Q8NGE7 335 aa12.02□□□□□ -0.49
CXCL12-202ENST00000374426 C3orf49Q96BT1 292 aa12.02□□□□□ -0.49
CXCL12-202ENST00000374426 FOXN4Q96NZ1 517 aa12.02□□□□□ -0.49
CXCL12-202ENST00000374426 TRNT1Q96Q11 434 aaKnown RBP12.02□□□□□ -0.49
CXCL12-202ENST00000374426 CFAP73A6NFT4 308 aa12.01□□□□□ -0.49
CXCL12-202ENST00000374426 LIPT2A6NK58 231 aa12.01□□□□□ -0.49
CXCL12-202ENST00000374426 AKR7A3O95154 331 aa12.01□□□□□ -0.49
CXCL12-202ENST00000374426 APEHP13798 732 aaKnown RBP12.01□□□□□ -0.49
CXCL12-202ENST00000374426 RPS4Y1P22090 263 aaKnown RBP12.01□□□□□ -0.49
CXCL12-202ENST00000374426 SERPINF1P36955 418 aa12.01□□□□□ -0.49
CXCL12-202ENST00000374426 SNRPD2P62316 118 aaKnown RBP12.01□□□□□ -0.49
CXCL12-202ENST00000374426 EPS8Q12929 822 aa12.01□□□□□ -0.49
CXCL12-202ENST00000374426 CEACAM7Q14002 265 aa12.01□□□□□ -0.49
CXCL12-202ENST00000374426 FAM174BQ3ZCQ3 159 aa12.01□□□□□ -0.49
CXCL12-202ENST00000374426 MRPL2Q5T653 305 aaKnown RBP12.01□□□□□ -0.49
CXCL12-202ENST00000374426 AAED1Q7RTV5 226 aa12.01□□□□□ -0.49
CXCL12-202ENST00000374426 RNF130Q86XS8 419 aa12.01□□□□□ -0.49
CXCL12-202ENST00000374426 NUDCD3Q8IVD9 361 aa12.01□□□□□ -0.49
CXCL12-202ENST00000374426 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.01□□□□□ -0.492e-6■■■□□ 18.6
CXCL12-202ENST00000374426 AURKBQ96GD4 344 aaPredicted RBP12.01□□□□□ -0.49
CXCL12-202ENST00000374426 PKNOX2Q96KN3 472 aa12.01□□□□□ -0.49
CXCL12-202ENST00000374426 CCDC115Q96NT0 180 aa12.01□□□□□ -0.49
CXCL12-202ENST00000374426 SLC38A2Q96QD8 506 aa12.01□□□□□ -0.49
CXCL12-202ENST00000374426 SF3B5Q9BWJ5 86 aaKnown RBP12.01□□□□□ -0.49
CXCL12-202ENST00000374426 C20orf27Q9GZN8 174 aa12.01□□□□□ -0.49
CXCL12-202ENST00000374426 ADAM19Q9H013 955 aa12.01□□□□□ -0.49
CXCL12-202ENST00000374426 OBP2BQ9NPH6 170 aa12.01□□□□□ -0.49
CXCL12-202ENST00000374426 CA10Q9NS85 328 aa12.01□□□□□ -0.49
CXCL12-202ENST00000374426 LOC390937A0A1W2PQ73 354 aa12□□□□□ -0.49
CXCL12-202ENST00000374426 AQP7P3A6NL99 342 aa12□□□□□ -0.49
CXCL12-202ENST00000374426 E9PBE3 544 aa12□□□□□ -0.49
CXCL12-202ENST00000374426 GPIP06744 558 aa12□□□□□ -0.49
CXCL12-202ENST00000374426 P2RY4P51582 365 aa12□□□□□ -0.49
CXCL12-202ENST00000374426 LGALS3BPQ08380 585 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms