RNA–Protein interactions for RNA: ENST00000372407.4

PTPRF-203, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,600 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-203ENST00000372407 SIAEQ9HAT2 523 aa10.64□□□□□ -0.71
PTPRF-203ENST00000372407 POLHQ9Y253 713 aa10.64□□□□□ -0.71
PTPRF-203ENST00000372407 FAM230AA0A1W2PPH8 454 aa10.64□□□□□ -0.71
PTPRF-203ENST00000372407 KDM4EB2RXH2 506 aaPredicted RBP10.64□□□□□ -0.71
PTPRF-203ENST00000372407 UBL3O95164 117 aa10.64□□□□□ -0.71
PTPRF-203ENST00000372407 HLA-AP01891 365 aaKnown RBP10.64□□□□□ -0.71
PTPRF-203ENST00000372407 POU3F1Q03052 451 aaPredicted RBP10.64□□□□□ -0.71
PTPRF-203ENST00000372407 RAB31Q13636 194 aa10.64□□□□□ -0.71
PTPRF-203ENST00000372407 DEFB133Q30KQ1 61 aa10.64□□□□□ -0.71
PTPRF-203ENST00000372407 FAM26DQ5JW98 314 aa10.64□□□□□ -0.71
PTPRF-203ENST00000372407 RTL6Q6ICC9 239 aa10.64□□□□□ -0.71
PTPRF-203ENST00000372407 B3GLCTQ6Y288 498 aa10.64□□□□□ -0.71
PTPRF-203ENST00000372407 MBOAT2Q6ZWT7 520 aa10.64□□□□□ -0.71
PTPRF-203ENST00000372407 COMTD1Q86VU5 262 aa10.64□□□□□ -0.71
PTPRF-203ENST00000372407 ESX1Q8N693 406 aa10.64□□□□□ -0.71
PTPRF-203ENST00000372407 OR4M1Q8NGD0 313 aa10.64□□□□□ -0.71
PTPRF-203ENST00000372407 TSPAN10Q9H1Z9 355 aaPredicted RBP10.64□□□□□ -0.71
PTPRF-203ENST00000372407 PLEKHA3Q9HB20 300 aa10.64□□□□□ -0.71
PTPRF-203ENST00000372407 C1GALT1Q9NS00 363 aa10.64□□□□□ -0.71
PTPRF-203ENST00000372407 GLTPQ9NZD2 209 aa10.64□□□□□ -0.71
PTPRF-203ENST00000372407 VSX1Q9NZR4 365 aaPredicted RBP10.64□□□□□ -0.71
PTPRF-203ENST00000372407 CD207Q9UJ71 328 aa10.64□□□□□ -0.71
PTPRF-203ENST00000372407 TMEM72A0PK05 275 aa10.63□□□□□ -0.71
PTPRF-203ENST00000372407 H3BQ06 376 aaPredicted RBP10.63□□□□□ -0.71
PTPRF-203ENST00000372407 NUPL2O15504 423 aaKnown RBP10.63□□□□□ -0.71
PTPRF-203ENST00000372407 NUDT21O43809 227 aaKnown RBP10.63□□□□□ -0.71
PTPRF-203ENST00000372407 IDUAP35475 653 aa10.63□□□□□ -0.71
PTPRF-203ENST00000372407 RPS25P62851 125 aaKnown RBP10.63□□□□□ -0.71
PTPRF-203ENST00000372407 TNFRSF17Q02223 184 aa10.63□□□□□ -0.71
PTPRF-203ENST00000372407 SRYQ05066 204 aa10.63□□□□□ -0.71
PTPRF-203ENST00000372407 RBMS2Q15434 407 aaKnown RBP10.63□□□□□ -0.71
PTPRF-203ENST00000372407 VASNQ6EMK4 673 aa10.63□□□□□ -0.71
PTPRF-203ENST00000372407 FAM111BQ6SJ93 734 aa10.63□□□□□ -0.71
PTPRF-203ENST00000372407 TBPL2Q6SJ96 375 aa10.63□□□□□ -0.71
PTPRF-203ENST00000372407 MEX3BQ6ZN04 569 aaKnown RBP10.63□□□□□ -0.71
PTPRF-203ENST00000372407 OR1S1Q8NH92 325 aa10.63□□□□□ -0.71
PTPRF-203ENST00000372407 TXNDC15Q96J42 360 aa10.63□□□□□ -0.71
PTPRF-203ENST00000372407 TEX37Q96LM6 180 aa10.63□□□□□ -0.71
PTPRF-203ENST00000372407 GPR78Q96P69 363 aa10.63□□□□□ -0.71
PTPRF-203ENST00000372407 TNFRSF13CQ96RJ3 184 aa10.63□□□□□ -0.71
PTPRF-203ENST00000372407 WDR83Q9BRX9 315 aaKnown RBP10.63□□□□□ -0.71
PTPRF-203ENST00000372407 CFHR5Q9BXR6 569 aa10.63□□□□□ -0.71
PTPRF-203ENST00000372407 CXCL16Q9H2A7 254 aa10.63□□□□□ -0.71
PTPRF-203ENST00000372407 TMEM100Q9NV29 134 aa10.63□□□□□ -0.71
PTPRF-203ENST00000372407 MOKQ9UQ07 419 aa10.63□□□□□ -0.71
PTPRF-203ENST00000372407 A6NCN8 305 aa10.63□□□□□ -0.71
PTPRF-203ENST00000372407 YY2O15391 372 aa10.63□□□□□ -0.71
PTPRF-203ENST00000372407 F11P03951 625 aa10.63□□□□□ -0.71
PTPRF-203ENST00000372407 GJA4P35212 333 aa10.63□□□□□ -0.71
PTPRF-203ENST00000372407 PIGAP37287 484 aa10.63□□□□□ -0.71
PTPRF-203ENST00000372407 SEC61A1P61619 476 aaKnown RBP10.63□□□□□ -0.71
PTPRF-203ENST00000372407 CRMP1Q14194 572 aa10.63□□□□□ -0.71
PTPRF-203ENST00000372407 SLX4IPQ5VYV7 408 aa10.63□□□□□ -0.71
PTPRF-203ENST00000372407 NIPAL3Q6P499 406 aa10.63□□□□□ -0.71
PTPRF-203ENST00000372407 SHISA6Q6ZSJ9 500 aa10.63□□□□□ -0.71
PTPRF-203ENST00000372407 FAM160A2Q8N612 972 aaPredicted RBP10.63□□□□□ -0.71
PTPRF-203ENST00000372407 OR5T1Q8NG75 326 aa10.63□□□□□ -0.71
PTPRF-203ENST00000372407 TMEM106AQ96A25 262 aa10.63□□□□□ -0.71
PTPRF-203ENST00000372407 TOE1Q96GM8 510 aaKnown RBP10.63□□□□□ -0.71
PTPRF-203ENST00000372407 ZNF582Q96NG8 517 aaPredicted RBP10.63□□□□□ -0.71
PTPRF-203ENST00000372407 NIPSNAP1Q9BPW8 284 aa10.63□□□□□ -0.71
PTPRF-203ENST00000372407 ALG12Q9BV10 488 aa10.63□□□□□ -0.71
PTPRF-203ENST00000372407 LMAN1LQ9HAT1 526 aa10.63□□□□□ -0.71
PTPRF-203ENST00000372407 ASIC5Q9NY37 505 aa10.63□□□□□ -0.71
PTPRF-203ENST00000372407 RREB1Q92766 1687 aa10.63□□□□□ -0.71
PTPRF-203ENST00000372407 RGPD3A6NKT7 1758 aaPredicted RBP10.63□□□□□ -0.71
PTPRF-203ENST00000372407 RGPD4Q7Z3J3 1758 aa10.63□□□□□ -0.71
PTPRF-203ENST00000372407 ZFAND5O76080 213 aa10.63□□□□□ -0.71
PTPRF-203ENST00000372407 SLCO2B1O94956 709 aa10.63□□□□□ -0.71
PTPRF-203ENST00000372407 IFNA17P01571 189 aa10.63□□□□□ -0.71
PTPRF-203ENST00000372407 IGHG1P01857 330 aa10.63□□□□□ -0.71
PTPRF-203ENST00000372407 PKLRP30613 574 aa10.63□□□□□ -0.71
PTPRF-203ENST00000372407 GDNFP39905 211 aa10.63□□□□□ -0.71
PTPRF-203ENST00000372407 MTNR1BP49286 362 aa10.63□□□□□ -0.71
PTPRF-203ENST00000372407 C14orf28Q4W4Y0 310 aa10.63□□□□□ -0.71
PTPRF-203ENST00000372407 XKR7Q5GH72 579 aa10.63□□□□□ -0.71
PTPRF-203ENST00000372407 NLRP8Q86W28 1048 aa10.63□□□□□ -0.71
PTPRF-203ENST00000372407 MKXQ8IYA7 352 aa10.63□□□□□ -0.71
PTPRF-203ENST00000372407 STEAP2Q8NFT2 490 aa10.63□□□□□ -0.71
PTPRF-203ENST00000372407 DUSP19Q8WTR2 217 aa10.63□□□□□ -0.71
PTPRF-203ENST00000372407 FCRL1Q96LA6 429 aa10.63□□□□□ -0.71
PTPRF-203ENST00000372407 HCAR1Q9BXC0 346 aa10.63□□□□□ -0.71
PTPRF-203ENST00000372407 MED20Q9H944 212 aa10.63□□□□□ -0.71
PTPRF-203ENST00000372407 TAS2R16Q9NYV7 291 aa10.63□□□□□ -0.71
PTPRF-203ENST00000372407 TP53TG5Q9Y2B4 290 aa10.63□□□□□ -0.71
PTPRF-203ENST00000372407 DOCK2Q92608 1830 aa10.63□□□□□ -0.71
PTPRF-203ENST00000372407 ZNF254O75437 659 aa10.62□□□□□ -0.71
PTPRF-203ENST00000372407 CHRM4P08173 479 aa10.62□□□□□ -0.71
PTPRF-203ENST00000372407 ELAVL4P26378 380 aaKnown RBP10.62□□□□□ -0.71
PTPRF-203ENST00000372407 ARNTP27540 789 aa10.62□□□□□ -0.71
PTPRF-203ENST00000372407 PCSK6P29122 969 aa10.62□□□□□ -0.71
PTPRF-203ENST00000372407 SHC1P29353 583 aa10.62□□□□□ -0.71
PTPRF-203ENST00000372407 PRKAR1BP31321 381 aa10.62□□□□□ -0.71
PTPRF-203ENST00000372407 POLR2HP52434 150 aaKnown RBP10.62□□□□□ -0.71
PTPRF-203ENST00000372407 RRAS2P62070 204 aaPredicted RBP10.62□□□□□ -0.71
PTPRF-203ENST00000372407 DUSP7Q16829 419 aa10.62□□□□□ -0.71
PTPRF-203ENST00000372407 KDM4DQ6B0I6 523 aa10.62□□□□□ -0.71
PTPRF-203ENST00000372407 COX15Q7KZN9 410 aa10.62□□□□□ -0.71
PTPRF-203ENST00000372407 OR6T1Q8NGN1 323 aa10.62□□□□□ -0.71
PTPRF-203ENST00000372407 SMAP2Q8WU79 429 aaPredicted RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms