RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 SLC27A4Q6P1M0 643 aa9.8□□□□□ -0.84
TPM3-212ENST00000368533 PRICKLE2Q7Z3G6 844 aa9.8□□□□□ -0.84
TPM3-212ENST00000368533 SYT14Q8NB59 555 aa9.8□□□□□ -0.84
TPM3-212ENST00000368533 SFXN5Q8TD22 340 aa9.8□□□□□ -0.84
TPM3-212ENST00000368533 PRRC1Q96M27 445 aa9.8□□□□□ -0.84
TPM3-212ENST00000368533 MIXL1Q9H2W2 232 aa9.8□□□□□ -0.84
TPM3-212ENST00000368533 NIPAL2Q9H841 368 aa9.8□□□□□ -0.84
TPM3-212ENST00000368533 TXNL4BQ9NX01 149 aaKnown RBP9.8□□□□□ -0.84
TPM3-212ENST00000368533 SERTAD3Q9UJW9 196 aa9.8□□□□□ -0.84
TPM3-212ENST00000368533 ZNF222Q9UK12 451 aa9.8□□□□□ -0.84
TPM3-212ENST00000368533 MRPS33Q9Y291 106 aaKnown RBP9.8□□□□□ -0.84
TPM3-212ENST00000368533 CMAHPQ9Y471 501 aa9.8□□□□□ -0.84
TPM3-212ENST00000368533 CLDN16Q9Y5I7 305 aa9.8□□□□□ -0.84
TPM3-212ENST00000368533 ZNF670-ZNF695F2Z2N8 137 aa9.79□□□□□ -0.84
TPM3-212ENST00000368533 CASKO14936 926 aa9.79□□□□□ -0.84
TPM3-212ENST00000368533 TOXO94900 526 aa9.79□□□□□ -0.84
TPM3-212ENST00000368533 LGI1O95970 557 aa9.79□□□□□ -0.84
TPM3-212ENST00000368533 IGKV1D-16P01601 117 aa9.79□□□□□ -0.84
TPM3-212ENST00000368533 FUT1P19526 365 aa9.79□□□□□ -0.84
TPM3-212ENST00000368533 IFNGR2P38484 337 aa9.79□□□□□ -0.84
TPM3-212ENST00000368533 MPLP40238 635 aa9.79□□□□□ -0.84
TPM3-212ENST00000368533 RPS25P62851 125 aaKnown RBP9.79□□□□□ -0.84
TPM3-212ENST00000368533 PSPHP78330 225 aa9.79□□□□□ -0.84
TPM3-212ENST00000368533 ASAH1Q13510 395 aa9.79□□□□□ -0.84
TPM3-212ENST00000368533 EXOSC2Q13868 293 aaKnown RBP9.79□□□□□ -0.84
TPM3-212ENST00000368533 FAM53BQ14153 422 aa9.79□□□□□ -0.84
TPM3-212ENST00000368533 P2RY14Q15391 338 aa9.79□□□□□ -0.84
TPM3-212ENST00000368533 FCN2Q15485 313 aa9.79□□□□□ -0.84
TPM3-212ENST00000368533 TCTE1Q5JU00 501 aa9.79□□□□□ -0.84
TPM3-212ENST00000368533 FHL5Q5TD97 284 aa9.79□□□□□ -0.84
TPM3-212ENST00000368533 B3GLCTQ6Y288 498 aa9.79□□□□□ -0.84
TPM3-212ENST00000368533 KANSL1Q7Z3B3 1105 aa9.79□□□□□ -0.84
TPM3-212ENST00000368533 OR5M3Q8NGP4 307 aa9.79□□□□□ -0.84
TPM3-212ENST00000368533 C16orf52Q8NHV5 167 aa9.79□□□□□ -0.84
TPM3-212ENST00000368533 GRHL3Q8TE85 626 aa9.79□□□□□ -0.84
TPM3-212ENST00000368533 DNAJA4Q8WW22 397 aaPredicted RBP9.79□□□□□ -0.84
TPM3-212ENST00000368533 GIMAP1Q8WWP7 306 aa9.79□□□□□ -0.84
TPM3-212ENST00000368533 ZNF501Q96CX3 271 aaPredicted RBP9.79□□□□□ -0.84
TPM3-212ENST00000368533 TMED9Q9BVK6 235 aa9.79□□□□□ -0.84
TPM3-212ENST00000368533 POLDIP3Q9BY77 421 aaKnown RBP9.79□□□□□ -0.84
TPM3-212ENST00000368533 FLRT3Q9NZU0 649 aa9.79□□□□□ -0.84
TPM3-212ENST00000368533 H2AFY2Q9P0M6 372 aaPredicted RBP9.79□□□□□ -0.84
TPM3-212ENST00000368533 KLHL21Q9UJP4 597 aa9.79□□□□□ -0.84
TPM3-212ENST00000368533 LSM2Q9Y333 95 aaKnown RBP9.79□□□□□ -0.84
TPM3-212ENST00000368533 PMS2P1A4D2B8 440 aa9.79□□□□□ -0.84
TPM3-212ENST00000368533 SLC30A4O14863 429 aa9.79□□□□□ -0.84
TPM3-212ENST00000368533 PLATP00750 562 aa9.79□□□□□ -0.84
TPM3-212ENST00000368533 CCL4P13236 92 aa9.79□□□□□ -0.84
TPM3-212ENST00000368533 ARSBP15848 533 aa9.79□□□□□ -0.84
TPM3-212ENST00000368533 FBLP22087 321 aaKnown RBP9.79□□□□□ -0.84
TPM3-212ENST00000368533 MTNR1AP48039 350 aa9.79□□□□□ -0.84
TPM3-212ENST00000368533 SLC16A1P53985 500 aa9.79□□□□□ -0.84
TPM3-212ENST00000368533 EPHA4P54764 986 aa9.79□□□□□ -0.84
TPM3-212ENST00000368533 GPR85P60893 370 aa9.79□□□□□ -0.84
TPM3-212ENST00000368533 RRAS2P62070 204 aaPredicted RBP9.79□□□□□ -0.84
TPM3-212ENST00000368533 PSG6Q00889 435 aa9.79□□□□□ -0.84
TPM3-212ENST00000368533 MLLT11Q13015 90 aaPredicted RBP9.79□□□□□ -0.84
TPM3-212ENST00000368533 OCLNQ16625 522 aa9.79□□□□□ -0.84
TPM3-212ENST00000368533 LCN10Q6JVE6 187 aa9.79□□□□□ -0.84
TPM3-212ENST00000368533 FAM26EQ8N5C1 309 aa9.79□□□□□ -0.84
TPM3-212ENST00000368533 PIGXQ8TBF5 258 aa9.79□□□□□ -0.84
TPM3-212ENST00000368533 KCTD7Q96MP8 289 aa9.79□□□□□ -0.84
TPM3-212ENST00000368533 SMAD5Q99717 465 aaKnown RBP9.79□□□□□ -0.84
TPM3-212ENST00000368533 UCK1Q9HA47 277 aa9.79□□□□□ -0.84
TPM3-212ENST00000368533 MAN2C1Q9NTJ4 1040 aa9.79□□□□□ -0.84
TPM3-212ENST00000368533 ZSCAN32Q9NX65 697 aa9.79□□□□□ -0.84
TPM3-212ENST00000368533 EPHA6Q9UF33 1036 aa9.79□□□□□ -0.84
TPM3-212ENST00000368533 ELF5Q9UKW6 265 aaPredicted RBP9.79□□□□□ -0.84
TPM3-212ENST00000368533 CSNK1G3Q9Y6M4 447 aa9.79□□□□□ -0.84
TPM3-212ENST00000368533 HEATR5AQ86XA9 2040 aa9.78□□□□□ -0.84
TPM3-212ENST00000368533 A0A075B6Q4 140 aa9.78□□□□□ -0.84
TPM3-212ENST00000368533 CCDC163A0A0D9SF12 145 aa9.78□□□□□ -0.84
TPM3-212ENST00000368533 CTNSO60931 367 aa9.78□□□□□ -0.84
TPM3-212ENST00000368533 SLC35E2P0CK97 266 aa9.78□□□□□ -0.84
TPM3-212ENST00000368533 MAP2K3P46734 347 aa9.78□□□□□ -0.84
TPM3-212ENST00000368533 EMDP50402 254 aa9.78□□□□□ -0.84
TPM3-212ENST00000368533 LIMK1P53667 647 aa9.78□□□□□ -0.84
TPM3-212ENST00000368533 CDH11P55287 796 aa9.78□□□□□ -0.84
TPM3-212ENST00000368533 WNT4P56705 351 aa9.78□□□□□ -0.84
TPM3-212ENST00000368533 MANEAQ5SRI9 462 aa9.78□□□□□ -0.84
TPM3-212ENST00000368533 TMEM71Q6P5X7 295 aa9.78□□□□□ -0.84
TPM3-212ENST00000368533 ZNF836Q6ZNA1 936 aa9.78□□□□□ -0.84
TPM3-212ENST00000368533 NKAIN4Q8IVV8 208 aa9.78□□□□□ -0.84
TPM3-212ENST00000368533 D2HGDHQ8N465 521 aa9.78□□□□□ -0.84
TPM3-212ENST00000368533 OR4F15Q8NGB8 312 aa9.78□□□□□ -0.84
TPM3-212ENST00000368533 C8orf44Q96CB5 159 aa9.78□□□□□ -0.84
TPM3-212ENST00000368533 ZNF764Q96H86 408 aaPredicted RBP9.78□□□□□ -0.84
TPM3-212ENST00000368533 DUSP23Q9BVJ7 150 aa9.78□□□□□ -0.84
TPM3-212ENST00000368533 TEX12Q9BXU0 123 aa9.78□□□□□ -0.84
TPM3-212ENST00000368533 PPA2Q9H2U2 334 aa9.78□□□□□ -0.84
TPM3-212ENST00000368533 LRRN3Q9H3W5 708 aa9.78□□□□□ -0.84
TPM3-212ENST00000368533 FOLH1BQ9HBA9 442 aa9.78□□□□□ -0.84
TPM3-212ENST00000368533 FANCFQ9NPI8 374 aa9.78□□□□□ -0.84
TPM3-212ENST00000368533 NDUFB11Q9NX14 153 aa9.78□□□□□ -0.84
TPM3-212ENST00000368533 MRPL39Q9NYK5 338 aaKnown RBP9.78□□□□□ -0.84
TPM3-212ENST00000368533 A0A0G2JPF8 293 aa9.78□□□□□ -0.84
TPM3-212ENST00000368533 POM121CA8CG34 1229 aa9.78□□□□□ -0.84
TPM3-212ENST00000368533 HNRNPCL3B7ZW38 293 aa9.78□□□□□ -0.84
TPM3-212ENST00000368533 MASP2O00187 686 aa9.78□□□□□ -0.84
TPM3-212ENST00000368533 AKAP8O43823 692 aaKnown RBP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms