RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 PDCD5O14737 125 aa9.33□□□□□ -0.92
PTPRA-203ENST00000356147 LILRB3O75022 631 aa9.33□□□□□ -0.92
PTPRA-203ENST00000356147 STX11O75558 287 aa9.33□□□□□ -0.92
PTPRA-203ENST00000356147 KRT33AO76009 404 aa9.33□□□□□ -0.92
PTPRA-203ENST00000356147 RPN2P04844 631 aa9.33□□□□□ -0.92
PTPRA-203ENST00000356147 SRMP19623 302 aa9.33□□□□□ -0.92
PTPRA-203ENST00000356147 PEBP1P30086 187 aaKnown RBP9.33□□□□□ -0.92
PTPRA-203ENST00000356147 H2BFSP57053 126 aa9.33□□□□□ -0.92
PTPRA-203ENST00000356147 NANOS3P60323 173 aaKnown RBP9.33□□□□□ -0.92
PTPRA-203ENST00000356147 EEF1A1P68104 462 aaKnown RBP9.33□□□□□ -0.92
PTPRA-203ENST00000356147 SIRPAP78324 504 aa9.33□□□□□ -0.92
PTPRA-203ENST00000356147 ARHGAP19Q14CB8 494 aa9.33□□□□□ -0.92
PTPRA-203ENST00000356147 ZNF77Q15935 545 aa9.33□□□□□ -0.92
PTPRA-203ENST00000356147 NNATQ16517 81 aa9.33□□□□□ -0.92
PTPRA-203ENST00000356147 RGS7BPQ6MZT1 257 aaPredicted RBP9.33□□□□□ -0.92
PTPRA-203ENST00000356147 LILRA6Q6PI73 481 aa9.33□□□□□ -0.92
PTPRA-203ENST00000356147 LRFN4Q6PJG9 635 aa9.33□□□□□ -0.92
PTPRA-203ENST00000356147 CDK20Q8IZL9 346 aa9.33□□□□□ -0.92
PTPRA-203ENST00000356147 VWCEQ96DN2 955 aa9.33□□□□□ -0.92
PTPRA-203ENST00000356147 SGTBQ96EQ0 304 aa9.33□□□□□ -0.92
PTPRA-203ENST00000356147 NMNAT3Q96T66 252 aa9.33□□□□□ -0.92
PTPRA-203ENST00000356147 TRPV4Q9HBA0 871 aa9.33□□□□□ -0.92
PTPRA-203ENST00000356147 NPDC1Q9NQX5 325 aaPredicted RBP9.33□□□□□ -0.92
PTPRA-203ENST00000356147 PTTG3PQ9NZH4 202 aa9.33□□□□□ -0.92
PTPRA-203ENST00000356147 ABRACLQ9P1F3 81 aa9.33□□□□□ -0.92
PTPRA-203ENST00000356147 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.33□□□□□ -0.92
PTPRA-203ENST00000356147 IER3IP1Q9Y5U9 82 aa9.33□□□□□ -0.92
PTPRA-203ENST00000356147 EYSQ5T1H1 3165 aa9.33□□□□□ -0.92
PTPRA-203ENST00000356147 ABHD14A-ACY1A0A1B0GW23 586 aa9.33□□□□□ -0.92
PTPRA-203ENST00000356147 PRR32B1ATL7 298 aa9.33□□□□□ -0.92
PTPRA-203ENST00000356147 RCBTB2O95199 551 aa9.33□□□□□ -0.92
PTPRA-203ENST00000356147 FBXO45P0C2W1 286 aa9.33□□□□□ -0.92
PTPRA-203ENST00000356147 CISD3P0C7P0 127 aa9.33□□□□□ -0.92
PTPRA-203ENST00000356147 VSIG10L2P0DP72 767 aa9.33□□□□□ -0.92
PTPRA-203ENST00000356147 ADH5P11766 374 aa9.33□□□□□ -0.92
PTPRA-203ENST00000356147 ZP3P21754 424 aa9.33□□□□□ -0.92
PTPRA-203ENST00000356147 CDK2P24941 298 aa9.33□□□□□ -0.92
PTPRA-203ENST00000356147 GUCA2AQ02747 115 aa9.33□□□□□ -0.92
PTPRA-203ENST00000356147 PLAURQ03405 335 aa9.33□□□□□ -0.92
PTPRA-203ENST00000356147 ZNF273Q14593 569 aa9.33□□□□□ -0.92
PTPRA-203ENST00000356147 METTL11BQ5VVY1 283 aa9.33□□□□□ -0.92
PTPRA-203ENST00000356147 OR7E24Q6IFN5 339 aa9.33□□□□□ -0.92
PTPRA-203ENST00000356147 ANKRD33Q7Z3H0 272 aa9.33□□□□□ -0.92
PTPRA-203ENST00000356147 HDDC3Q8N4P3 179 aa9.33□□□□□ -0.92
PTPRA-203ENST00000356147 OR2L3Q8NG85 312 aa9.33□□□□□ -0.92
PTPRA-203ENST00000356147 OR8S1Q8NH09 359 aa9.33□□□□□ -0.92
PTPRA-203ENST00000356147 DVL3Q92997 716 aaPredicted RBP9.33□□□□□ -0.92
PTPRA-203ENST00000356147 RSPRY1Q96DX4 576 aa9.33□□□□□ -0.92
PTPRA-203ENST00000356147 SMIM19Q96E16 107 aa9.33□□□□□ -0.92
PTPRA-203ENST00000356147 PCBD2Q9H0N5 130 aa9.33□□□□□ -0.92
PTPRA-203ENST00000356147 ANKRD19PQ9H560 264 aa9.33□□□□□ -0.92
PTPRA-203ENST00000356147 CALML5Q9NZT1 146 aa9.33□□□□□ -0.92
PTPRA-203ENST00000356147 MOKQ9UQ07 419 aa9.33□□□□□ -0.92
PTPRA-203ENST00000356147 BAIAP2Q9UQB8 552 aa9.33□□□□□ -0.92
PTPRA-203ENST00000356147 NPTNQ9Y639 398 aa9.33□□□□□ -0.92
PTPRA-203ENST00000356147 GOSR2O14653 212 aa9.32□□□□□ -0.92
PTPRA-203ENST00000356147 CREBL2O60519 120 aaPredicted RBP9.32□□□□□ -0.92
PTPRA-203ENST00000356147 ARL6IP5O75915 188 aa9.32□□□□□ -0.92
PTPRA-203ENST00000356147 RASGRP1O95267 797 aa9.32□□□□□ -0.92
PTPRA-203ENST00000356147 CBX7O95931 251 aa9.32□□□□□ -0.92
PTPRA-203ENST00000356147 AK4P27144 223 aaPredicted RBP9.32□□□□□ -0.92
PTPRA-203ENST00000356147 P2RX1P51575 399 aa9.32□□□□□ -0.92
PTPRA-203ENST00000356147 TRA2BP62995 288 aaKnown RBP9.32□□□□□ -0.92
PTPRA-203ENST00000356147 DEFA5Q01523 94 aa9.32□□□□□ -0.92
PTPRA-203ENST00000356147 ZNF234Q14588 700 aa9.32□□□□□ -0.92
PTPRA-203ENST00000356147 ZIC1Q15915 447 aa9.32□□□□□ -0.92
PTPRA-203ENST00000356147 UBE2NLQ5JXB2 153 aa9.32□□□□□ -0.92
PTPRA-203ENST00000356147 C11orf88Q6PI97 169 aa9.32□□□□□ -0.92
PTPRA-203ENST00000356147 ERN2Q76MJ5 926 aaKnown RBP9.32□□□□□ -0.92
PTPRA-203ENST00000356147 PRSS41Q7RTY9 318 aa9.32□□□□□ -0.92
PTPRA-203ENST00000356147 RD3Q7Z3Z2 195 aa9.32□□□□□ -0.92
PTPRA-203ENST00000356147 SPRED2Q7Z698 418 aa9.32□□□□□ -0.92
PTPRA-203ENST00000356147 LRRC25Q8N386 305 aaPredicted RBP9.32□□□□□ -0.92
PTPRA-203ENST00000356147 COX18Q8N8Q8 333 aa9.32□□□□□ -0.92
PTPRA-203ENST00000356147 ZNF511Q8NB15 262 aa9.32□□□□□ -0.92
PTPRA-203ENST00000356147 THEM6Q8WUY1 208 aa9.32□□□□□ -0.92
PTPRA-203ENST00000356147 FCAMRQ8WWV6 532 aa9.32□□□□□ -0.92
PTPRA-203ENST00000356147 DEFB118Q96PH6 123 aa9.32□□□□□ -0.92
PTPRA-203ENST00000356147 ACTR6Q9GZN1 396 aa9.32□□□□□ -0.92
PTPRA-203ENST00000356147 TMEM138Q9NPI0 162 aa9.32□□□□□ -0.92
PTPRA-203ENST00000356147 KRCC1Q9NPI7 259 aaPredicted RBP9.32□□□□□ -0.92
PTPRA-203ENST00000356147 KLHL9Q9P2J3 617 aa9.32□□□□□ -0.92
PTPRA-203ENST00000356147 SERGEFQ9UGK8 458 aa9.32□□□□□ -0.92
PTPRA-203ENST00000356147 CA5BQ9Y2D0 317 aa9.32□□□□□ -0.92
PTPRA-203ENST00000356147 IFITM5A6NNB3 132 aa9.32□□□□□ -0.92
PTPRA-203ENST00000356147 H0YC42 278 aa9.32□□□□□ -0.92
PTPRA-203ENST00000356147 RAD1O60671 282 aa9.32□□□□□ -0.92
PTPRA-203ENST00000356147 MAS1P04201 325 aa9.32□□□□□ -0.92
PTPRA-203ENST00000356147 CPMP14384 443 aa9.32□□□□□ -0.92
PTPRA-203ENST00000356147 CEBPBP17676 345 aa9.32□□□□□ -0.92
PTPRA-203ENST00000356147 SLC2A5P22732 501 aa9.32□□□□□ -0.92
PTPRA-203ENST00000356147 RPL4P36578 427 aaKnown RBP9.32□□□□□ -0.92
PTPRA-203ENST00000356147 PTH2RP49190 550 aa9.32□□□□□ -0.92
PTPRA-203ENST00000356147 DPTQ07507 201 aa9.32□□□□□ -0.92
PTPRA-203ENST00000356147 DYRK1AQ13627 763 aa9.32□□□□□ -0.92
PTPRA-203ENST00000356147 AMZ1Q400G9 498 aa9.32□□□□□ -0.92
PTPRA-203ENST00000356147 BEX5Q5H9J7 111 aa9.32□□□□□ -0.92
PTPRA-203ENST00000356147 GLDNQ6ZMI3 551 aaPredicted RBP9.32□□□□□ -0.92
PTPRA-203ENST00000356147 TMUB2Q71RG4 321 aa9.32□□□□□ -0.92
PTPRA-203ENST00000356147 NRROSQ86YC3 692 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms