RNA–Protein interactions for RNA: ENST00000353578.8

COL6A3-203, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5 BASIC

Gene COL6A3, Length 9,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-203ENST00000353578 DVL1O14640 695 aa11.81□□□□□ -0.52
COL6A3-203ENST00000353578 CPEP16870 476 aa11.81□□□□□ -0.52
COL6A3-203ENST00000353578 LILRA4P59901 499 aa11.81□□□□□ -0.52
COL6A3-203ENST00000353578 CBLL1Q75N03 491 aa11.81□□□□□ -0.52
COL6A3-203ENST00000353578 SLC41A2Q96JW4 573 aa11.81□□□□□ -0.52
COL6A3-203ENST00000353578 RIMS1Q86UR5 1692 aaKnown RBP11.81□□□□□ -0.52
COL6A3-203ENST00000353578 A0A0B4J2A0 478 aa11.81□□□□□ -0.52
COL6A3-203ENST00000353578 AADACP22760 399 aa11.81□□□□□ -0.52
COL6A3-203ENST00000353578 GPR17Q13304 367 aa11.81□□□□□ -0.52
COL6A3-203ENST00000353578 SCMH1Q96GD3 660 aa11.81□□□□□ -0.52
COL6A3-203ENST00000353578 NKX3-1Q99801 234 aaPredicted RBP11.81□□□□□ -0.52
COL6A3-203ENST00000353578 OR10A5Q9H207 317 aa11.81□□□□□ -0.52
COL6A3-203ENST00000353578 ADARB2Q9NS39 739 aaKnown RBP11.81□□□□□ -0.52
COL6A3-203ENST00000353578 TAS2R5Q9NYW4 299 aa11.81□□□□□ -0.52
COL6A3-203ENST00000353578 SHPKQ9UHJ6 478 aa11.81□□□□□ -0.52
COL6A3-203ENST00000353578 RAB22AQ9UL26 194 aa11.81□□□□□ -0.52
COL6A3-203ENST00000353578 H3BQ06 376 aaPredicted RBP11.81□□□□□ -0.52
COL6A3-203ENST00000353578 OR12D1P0DN82 309 aa11.81□□□□□ -0.52
COL6A3-203ENST00000353578 RAB28P51157 221 aa11.81□□□□□ -0.52
COL6A3-203ENST00000353578 HSD17B7P56937 341 aa11.81□□□□□ -0.52
COL6A3-203ENST00000353578 GRB7Q14451 532 aa11.81□□□□□ -0.52
COL6A3-203ENST00000353578 LEG1Q6P5S2 330 aa11.81□□□□□ -0.52
COL6A3-203ENST00000353578 LGALS14Q8TCE9 139 aa11.81□□□□□ -0.52
COL6A3-203ENST00000353578 BORCS6Q96GS4 357 aa11.81□□□□□ -0.52
COL6A3-203ENST00000353578 PDZD7Q9H5P4 517 aa11.81□□□□□ -0.52
COL6A3-203ENST00000353578 PCDHGA1Q9Y5H4 931 aa11.81□□□□□ -0.52
COL6A3-203ENST00000353578 MAFBQ9Y5Q3 323 aaPredicted RBP11.81□□□□□ -0.52
COL6A3-203ENST00000353578 ARHGEF17Q96PE2 2063 aaPredicted RBP11.81□□□□□ -0.52
COL6A3-203ENST00000353578 HEATR5BQ9P2D3 2071 aa11.81□□□□□ -0.52
COL6A3-203ENST00000353578 XKRY2A2RUG3 117 aa11.81□□□□□ -0.52
COL6A3-203ENST00000353578 MEIS3P1A6NDR6 274 aa11.81□□□□□ -0.52
COL6A3-203ENST00000353578 CSTAP01040 98 aa11.81□□□□□ -0.52
COL6A3-203ENST00000353578 FBP1P09467 338 aa11.81□□□□□ -0.52
COL6A3-203ENST00000353578 DUSP1P28562 367 aa11.81□□□□□ -0.52
COL6A3-203ENST00000353578 TAS2R38P59533 333 aa11.81□□□□□ -0.52
COL6A3-203ENST00000353578 SERINC5Q86VE9 423 aa11.81□□□□□ -0.52
COL6A3-203ENST00000353578 SEC11CQ9BY50 192 aa11.81□□□□□ -0.52
COL6A3-203ENST00000353578 DNMT3AQ9Y6K1 912 aaPredicted RBP11.81□□□□□ -0.52
COL6A3-203ENST00000353578 RPS15AP62244 130 aaKnown RBP11.81□□□□□ -0.52
COL6A3-203ENST00000353578 BTG3Q14201 252 aaPredicted RBP11.81□□□□□ -0.52
COL6A3-203ENST00000353578 GBX1Q14549 363 aa11.81□□□□□ -0.52
COL6A3-203ENST00000353578 C14orf80Q86SX3 495 aa11.81□□□□□ -0.52
COL6A3-203ENST00000353578 IGDCC3Q8IVU1 814 aa11.81□□□□□ -0.52
COL6A3-203ENST00000353578 ANKLE1Q8NAG6 615 aa11.81□□□□□ -0.52
COL6A3-203ENST00000353578 TDP1Q9NUW8 608 aa11.81□□□□□ -0.52
COL6A3-203ENST00000353578 EHFQ9NZC4 300 aa11.81□□□□□ -0.52
COL6A3-203ENST00000353578 STEAP1Q9UHE8 339 aa11.81□□□□□ -0.52
COL6A3-203ENST00000353578 FLVCR2Q9UPI3 526 aa11.81□□□□□ -0.52
COL6A3-203ENST00000353578 CD99P14209 185 aa11.81□□□□□ -0.52
COL6A3-203ENST00000353578 PPP1CBP62140 327 aa11.81□□□□□ -0.52
COL6A3-203ENST00000353578 CATR1Q13166 79 aa11.81□□□□□ -0.52
COL6A3-203ENST00000353578 KIAA0319Q5VV43 1072 aa11.81□□□□□ -0.52
COL6A3-203ENST00000353578 MACROD1Q9BQ69 325 aa11.81□□□□□ -0.52
COL6A3-203ENST00000353578 KDM4FA0A1W2PPD8 638 aa11.8□□□□□ -0.52
COL6A3-203ENST00000353578 OR6K3Q8NGY3 331 aa11.8□□□□□ -0.52
COL6A3-203ENST00000353578 OR6N1Q8NGY5 312 aa11.8□□□□□ -0.52
COL6A3-203ENST00000353578 ACER1Q8TDN7 264 aa11.8□□□□□ -0.52
COL6A3-203ENST00000353578 ZNF426Q9BUY5 554 aa11.8□□□□□ -0.52
COL6A3-203ENST00000353578 ELP3Q9H9T3 547 aa11.8□□□□□ -0.52
COL6A3-203ENST00000353578 AIFM1O95831 613 aa11.8□□□□□ -0.52
COL6A3-203ENST00000353578 IVDP26440 423 aa11.8□□□□□ -0.52
COL6A3-203ENST00000353578 MMP15P51511 669 aa11.8□□□□□ -0.52
COL6A3-203ENST00000353578 NFATC2Q13469 925 aa11.8□□□□□ -0.52
COL6A3-203ENST00000353578 PGGHGQ32M88 737 aa11.8□□□□□ -0.52
COL6A3-203ENST00000353578 LRRC73Q5JTD7 316 aa11.8□□□□□ -0.52
COL6A3-203ENST00000353578 ARFGAP1Q8N6T3 406 aa11.8□□□□□ -0.52
COL6A3-203ENST00000353578 NEURL2Q9BR09 285 aa11.8□□□□□ -0.52
COL6A3-203ENST00000353578 GABARAPL3Q9BY60 117 aa11.8□□□□□ -0.52
COL6A3-203ENST00000353578 PARD6AQ9NPB6 346 aa11.8□□□□□ -0.52
COL6A3-203ENST00000353578 APBB3O95704 486 aa11.8□□□□□ -0.52
COL6A3-203ENST00000353578 ACRV1P26436 265 aa11.8□□□□□ -0.52
COL6A3-203ENST00000353578 SEZ6L2Q6UXD5 910 aa11.8□□□□□ -0.52
COL6A3-203ENST00000353578 TAC4Q86UU9 113 aa11.8□□□□□ -0.52
COL6A3-203ENST00000353578 GALNT16Q8N428 558 aa11.8□□□□□ -0.52
COL6A3-203ENST00000353578 DVL3Q92997 716 aaPredicted RBP11.8□□□□□ -0.52
COL6A3-203ENST00000353578 PDGFDQ9GZP0 370 aaPredicted RBP11.8□□□□□ -0.52
COL6A3-203ENST00000353578 SPATA31A5Q5VU36 1347 aa11.8□□□□□ -0.52
COL6A3-203ENST00000353578 SPATA31A7Q8IWB4 1347 aa11.8□□□□□ -0.52
COL6A3-203ENST00000353578 FRMPD2BQ6IN97 320 aa11.8□□□□□ -0.52
COL6A3-203ENST00000353578 CD200R1Q8TD46 325 aa11.8□□□□□ -0.52
COL6A3-203ENST00000353578 NTMT1Q9BV86 223 aa11.8□□□□□ -0.52
COL6A3-203ENST00000353578 SPACA1Q9HBV2 294 aa11.8□□□□□ -0.52
COL6A3-203ENST00000353578 GOLT1BQ9Y3E0 138 aa11.8□□□□□ -0.52
COL6A3-203ENST00000353578 TIMM13Q9Y5L4 95 aaPredicted RBP11.8□□□□□ -0.52
COL6A3-203ENST00000353578 TOGARAM1Q9Y4F4 1720 aa11.8□□□□□ -0.52
COL6A3-203ENST00000353578 FASLGP48023 281 aa11.8□□□□□ -0.52
COL6A3-203ENST00000353578 EFNA3P52797 238 aa11.8□□□□□ -0.52
COL6A3-203ENST00000353578 SLC35A2P78381 396 aa11.8□□□□□ -0.52
COL6A3-203ENST00000353578 CHD3Q12873 2000 aaKnown RBP11.8□□□□□ -0.52
COL6A3-203ENST00000353578 GGTA1PQ4G0N0 100 aa11.8□□□□□ -0.52
COL6A3-203ENST00000353578 HCAR1Q9BXC0 346 aa11.8□□□□□ -0.52
COL6A3-203ENST00000353578 SLC35B3Q9H1N7 401 aa11.8□□□□□ -0.52
COL6A3-203ENST00000353578 CCL15-CCL14A0A0B4J2E2 113 aa11.8□□□□□ -0.52
COL6A3-203ENST00000353578 KIAA1324LA8MWY0 1029 aaPredicted RBP11.8□□□□□ -0.52
COL6A3-203ENST00000353578 SRMP19623 302 aa11.8□□□□□ -0.52
COL6A3-203ENST00000353578 GGT5P36269 586 aa11.8□□□□□ -0.52
COL6A3-203ENST00000353578 CCL15Q16663 113 aa11.8□□□□□ -0.52
COL6A3-203ENST00000353578 ELFN2Q5R3F8 820 aa11.8□□□□□ -0.52
COL6A3-203ENST00000353578 C18orf63Q68DL7 685 aa11.8□□□□□ -0.52
COL6A3-203ENST00000353578 OR4A47Q6IF82 309 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms