RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 ELK1P19419 428 aa12.05□□□□□ -0.48
USP47-202ENST00000339865 STK19P49842 368 aaPredicted RBP12.05□□□□□ -0.48
USP47-202ENST00000339865 MPEG1Q2M385 716 aa12.05□□□□□ -0.48
USP47-202ENST00000339865 TMEM201Q5SNT2 666 aa12.05□□□□□ -0.48
USP47-202ENST00000339865 TRNP1Q6NT89 227 aa12.05□□□□□ -0.48
USP47-202ENST00000339865 CMTM8Q8IZV2 173 aa12.05□□□□□ -0.48
USP47-202ENST00000339865 KCNJ15Q99712 375 aa12.05□□□□□ -0.48
USP47-202ENST00000339865 LRIT1Q9P2V4 623 aa12.05□□□□□ -0.48
USP47-202ENST00000339865 KDM4EB2RXH2 506 aaPredicted RBP12.04□□□□□ -0.48
USP47-202ENST00000339865 STC1P52823 247 aa12.04□□□□□ -0.48
USP47-202ENST00000339865 RPE65Q16518 533 aa12.04□□□□□ -0.48
USP47-202ENST00000339865 ACKR1Q16570 336 aa12.04□□□□□ -0.48
USP47-202ENST00000339865 PLEKHS1Q5SXH7 462 aa12.04□□□□□ -0.48
USP47-202ENST00000339865 RTL6Q6ICC9 239 aa12.04□□□□□ -0.48
USP47-202ENST00000339865 MINDY1Q8N5J2 469 aa12.04□□□□□ -0.48
USP47-202ENST00000339865 SLC5A8Q8N695 610 aa12.04□□□□□ -0.48
USP47-202ENST00000339865 OR1A2Q9Y585 309 aa12.04□□□□□ -0.48
USP47-202ENST00000339865 PDGFBP01127 241 aaPredicted RBP12.04□□□□□ -0.48
USP47-202ENST00000339865 CDC34P49427 236 aaPredicted RBP12.04□□□□□ -0.48
USP47-202ENST00000339865 ZXDBP98169 803 aa12.04□□□□□ -0.48
USP47-202ENST00000339865 TIGD5Q53EQ6 642 aa12.04□□□□□ -0.48
USP47-202ENST00000339865 WDR74Q6RFH5 385 aaPredicted RBP12.04□□□□□ -0.48
USP47-202ENST00000339865 TMEM139Q8IV31 216 aa12.04□□□□□ -0.48
USP47-202ENST00000339865 APH1AQ96BI3 265 aa12.04□□□□□ -0.48
USP47-202ENST00000339865 SERINC2Q96SA4 455 aa12.04□□□□□ -0.48
USP47-202ENST00000339865 POFUT1Q9H488 388 aa12.04□□□□□ -0.48
USP47-202ENST00000339865 AKIRIN1Q9H9L7 192 aaPredicted RBP12.04□□□□□ -0.48
USP47-202ENST00000339865 ACOXLQ9NUZ1 547 aa12.04□□□□□ -0.48
USP47-202ENST00000339865 IER3IP1Q9Y5U9 82 aa12.04□□□□□ -0.48
USP47-202ENST00000339865 ANTXRLA6NF34 631 aa12.04□□□□□ -0.48
USP47-202ENST00000339865 PHOX2AO14813 284 aa12.04□□□□□ -0.48
USP47-202ENST00000339865 CCL5P13501 91 aa12.04□□□□□ -0.48
USP47-202ENST00000339865 GM2AP17900 193 aa12.04□□□□□ -0.48
USP47-202ENST00000339865 USP53Q70EK8 1073 aa12.04□□□□□ -0.48
USP47-202ENST00000339865 TMEM18Q96B42 140 aa12.04□□□□□ -0.48
USP47-202ENST00000339865 ZNF599Q96NL3 588 aa12.04□□□□□ -0.48
USP47-202ENST00000339865 INPP5KQ9BT40 448 aa12.04□□□□□ -0.48
USP47-202ENST00000339865 YTHDF2Q9Y5A9 579 aaKnown RBP12.04□□□□□ -0.48
USP47-202ENST00000339865 PHF1O43189 567 aaPredicted RBP12.04□□□□□ -0.48
USP47-202ENST00000339865 TNFSF8P32971 234 aa12.04□□□□□ -0.48
USP47-202ENST00000339865 PBX1P40424 430 aa12.04□□□□□ -0.48
USP47-202ENST00000339865 UBE2G1P62253 170 aa12.04□□□□□ -0.48
USP47-202ENST00000339865 CDK5Q00535 292 aa12.04□□□□□ -0.48
USP47-202ENST00000339865 EXOSC2Q13868 293 aaKnown RBP12.04□□□□□ -0.48
USP47-202ENST00000339865 CEBPEQ15744 281 aa12.04□□□□□ -0.48
USP47-202ENST00000339865 TMEM244Q5VVB8 128 aa12.04□□□□□ -0.48
USP47-202ENST00000339865 C14orf80Q86SX3 495 aa12.04□□□□□ -0.48
USP47-202ENST00000339865 RASD2Q96D21 266 aa12.04□□□□□ -0.48
USP47-202ENST00000339865 CAMK2AQ9UQM7 478 aa12.04□□□□□ -0.48
USP47-202ENST00000339865 ZNF407Q9C0G0 2248 aa12.04□□□□□ -0.48
USP47-202ENST00000339865 METTL15A6NJ78 407 aa12.04□□□□□ -0.48
USP47-202ENST00000339865 CNIH1O95406 144 aa12.04□□□□□ -0.48
USP47-202ENST00000339865 HTR4Q13639 388 aa12.04□□□□□ -0.48
USP47-202ENST00000339865 ZFAND4Q86XD8 727 aa12.04□□□□□ -0.48
USP47-202ENST00000339865 F2RL3Q96RI0 385 aa12.04□□□□□ -0.48
USP47-202ENST00000339865 IQSEC2Q5JU85 1478 aa12.04□□□□□ -0.48
USP47-202ENST00000339865 LOC102725191A0A1B0GVB3 256 aa12.04□□□□□ -0.48
USP47-202ENST00000339865 HELTA6NFD8 242 aa12.04□□□□□ -0.48
USP47-202ENST00000339865 M0R3H8 397 aa12.04□□□□□ -0.48
USP47-202ENST00000339865 TYRP14679 529 aa12.04□□□□□ -0.48
USP47-202ENST00000339865 S100A11P31949 105 aa12.04□□□□□ -0.48
USP47-202ENST00000339865 MEOX1P50221 254 aa12.04□□□□□ -0.48
USP47-202ENST00000339865 RCAN2Q14206 197 aa12.04□□□□□ -0.48
USP47-202ENST00000339865 CLEC12BQ2HXU8 276 aa12.04□□□□□ -0.48
USP47-202ENST00000339865 TUSC1Q2TAM9 212 aa12.04□□□□□ -0.48
USP47-202ENST00000339865 GLYR1Q49A26 553 aaPredicted RBP12.04□□□□□ -0.48
USP47-202ENST00000339865 RHOUQ7L0Q8 258 aa12.04□□□□□ -0.48
USP47-202ENST00000339865 IFI44Q8TCB0 444 aa12.04□□□□□ -0.48
USP47-202ENST00000339865 MED9Q9NWA0 146 aa12.04□□□□□ -0.48
USP47-202ENST00000339865 PISDQ9UG56 409 aa12.04□□□□□ -0.48
USP47-202ENST00000339865 INTS6Q9UL03 887 aaKnown RBP12.04□□□□□ -0.48
USP47-202ENST00000339865 CEPT1Q9Y6K0 416 aa12.04□□□□□ -0.48
USP47-202ENST00000339865 CDHR4A6H8M9 788 aa12.04□□□□□ -0.48
USP47-202ENST00000339865 ADAMTS4O75173 837 aa12.04□□□□□ -0.48
USP47-202ENST00000339865 UNGP13051 313 aaPredicted RBP12.04□□□□□ -0.48
USP47-202ENST00000339865 RAB6CQ53S08 254 aa12.04□□□□□ -0.48
USP47-202ENST00000339865 TCTE1Q5JU00 501 aa12.04□□□□□ -0.48
USP47-202ENST00000339865 MOB3CQ70IA8 216 aa12.04□□□□□ -0.48
USP47-202ENST00000339865 OR5L2Q8NGL0 311 aa12.04□□□□□ -0.48
USP47-202ENST00000339865 SOX7Q9BT81 388 aa12.04□□□□□ -0.48
USP47-202ENST00000339865 PGAP2Q9UHJ9 254 aa12.04□□□□□ -0.48
USP47-202ENST00000339865 BOLA1Q9Y3E2 137 aa12.04□□□□□ -0.48
USP47-202ENST00000339865 KCTD3Q9Y597 815 aa12.04□□□□□ -0.48
USP47-202ENST00000339865 PCDHA9Q9Y5H5 950 aa12.04□□□□□ -0.48
USP47-202ENST00000339865 FAM183AA6NL82 134 aa12.03□□□□□ -0.48
USP47-202ENST00000339865 EIF3FO00303 357 aaPredicted RBP12.03□□□□□ -0.48
USP47-202ENST00000339865 EGFP01133 1207 aa12.03□□□□□ -0.48
USP47-202ENST00000339865 FGF3P11487 239 aaPredicted RBP12.03□□□□□ -0.48
USP47-202ENST00000339865 RAB5AP20339 215 aa12.03□□□□□ -0.48
USP47-202ENST00000339865 HMGCLP35914 325 aa12.03□□□□□ -0.48
USP47-202ENST00000339865 MLF2Q15773 248 aaPredicted RBP12.03□□□□□ -0.48
USP47-202ENST00000339865 PIP5KL1Q5T9C9 394 aa12.03□□□□□ -0.48
USP47-202ENST00000339865 GDPGP1Q6ZNW5 385 aa12.03□□□□□ -0.48
USP47-202ENST00000339865 OR4K5Q8NGD3 323 aa12.03□□□□□ -0.48
USP47-202ENST00000339865 ENKD1Q9H0I2 346 aa12.03□□□□□ -0.48
USP47-202ENST00000339865 ZNF768Q9H5H4 540 aaKnown RBP12.03□□□□□ -0.48
USP47-202ENST00000339865 HSD17B6O14756 317 aa12.03□□□□□ -0.48
USP47-202ENST00000339865 VEGFDO43915 354 aa12.03□□□□□ -0.48
USP47-202ENST00000339865 NME2P1O60361 137 aa12.03□□□□□ -0.48
USP47-202ENST00000339865 PMP2P02689 132 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms