RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 RPL14P50914 215 aaKnown RBP13.69□□□□□ -0.22
LINC01116-202ENST00000339037 HPCAP84074 193 aa13.69□□□□□ -0.22
LINC01116-202ENST00000339037 H3F3AP84243 136 aa13.69□□□□□ -0.22
LINC01116-202ENST00000339037 SWI5Q1ZZU3 235 aa13.69□□□□□ -0.22
LINC01116-202ENST00000339037 KRTAP24-1Q3LI83 254 aa13.69□□□□□ -0.22
LINC01116-202ENST00000339037 TNFAIP8L3Q5GJ75 292 aa13.69□□□□□ -0.22
LINC01116-202ENST00000339037 CEP85LQ5SZL2 805 aa13.69□□□□□ -0.22
LINC01116-202ENST00000339037 TNFAIP8L2Q6P589 184 aaPredicted RBP13.69□□□□□ -0.22
LINC01116-202ENST00000339037 ANKRD46Q86W74 232 aa13.69□□□□□ -0.22
LINC01116-202ENST00000339037 ADGRG3Q86Y34 549 aa13.69□□□□□ -0.22
LINC01116-202ENST00000339037 ARFGAP2Q8N6H7 521 aa13.69□□□□□ -0.22
LINC01116-202ENST00000339037 WDR31Q8NA23 367 aa13.69□□□□□ -0.22
LINC01116-202ENST00000339037 XAGE5Q8WWM1 108 aa13.69□□□□□ -0.22
LINC01116-202ENST00000339037 RAB8BQ92930 207 aa13.69□□□□□ -0.22
LINC01116-202ENST00000339037 ROPN1LQ96C74 230 aa13.69□□□□□ -0.22
LINC01116-202ENST00000339037 EXOSC3Q9NQT5 275 aaKnown RBP13.69□□□□□ -0.22
LINC01116-202ENST00000339037 PARPBPQ9NWS1 579 aa13.69□□□□□ -0.22
LINC01116-202ENST00000339037 TMEM181Q9P2C4 612 aa13.69□□□□□ -0.22
LINC01116-202ENST00000339037 DCTN4Q9UJW0 460 aa13.69□□□□□ -0.22
LINC01116-202ENST00000339037 RAB21Q9UL25 225 aa13.69□□□□□ -0.22
LINC01116-202ENST00000339037 TRAPPC4Q9Y296 219 aa13.69□□□□□ -0.22
LINC01116-202ENST00000339037 SLC9A8Q9Y2E8 581 aa13.69□□□□□ -0.22
LINC01116-202ENST00000339037 AMDHD2Q9Y303 409 aa13.69□□□□□ -0.22
LINC01116-202ENST00000339037 CLDN24A6NM45 220 aa13.68□□□□□ -0.22
LINC01116-202ENST00000339037 ATP6V1G2-DDX39BF2Z307 99 aa13.68□□□□□ -0.22
LINC01116-202ENST00000339037 LMX1BO60663 402 aa13.68□□□□□ -0.22
LINC01116-202ENST00000339037 EIF1BO60739 113 aaKnown RBP13.68□□□□□ -0.22
LINC01116-202ENST00000339037 SCN2BO60939 215 aa13.68□□□□□ -0.22
LINC01116-202ENST00000339037 APOBEC3AP31941 199 aaPredicted RBP13.68□□□□□ -0.22
LINC01116-202ENST00000339037 THBS2P35442 1172 aa13.68□□□□□ -0.22
LINC01116-202ENST00000339037 HTR3AP46098 478 aa13.68□□□□□ -0.22
LINC01116-202ENST00000339037 GZMKP49863 264 aa13.68□□□□□ -0.22
LINC01116-202ENST00000339037 PHC1P78364 1004 aa13.68□□□□□ -0.22
LINC01116-202ENST00000339037 SLC25A3Q00325 362 aa13.68□□□□□ -0.22
LINC01116-202ENST00000339037 FUT5Q11128 374 aa13.68□□□□□ -0.22
LINC01116-202ENST00000339037 KLHL24Q6TFL4 600 aa13.68□□□□□ -0.22
LINC01116-202ENST00000339037 FRRS1Q6ZNA5 592 aa13.68□□□□□ -0.22
LINC01116-202ENST00000339037 HMGN2P46Q86SG4 172 aa13.68□□□□□ -0.22
LINC01116-202ENST00000339037 ARIH2OSQ8N7S6 290 aa13.68□□□□□ -0.22
LINC01116-202ENST00000339037 OR8J2Q8NGG1 315 aa13.68□□□□□ -0.22
LINC01116-202ENST00000339037 ZG16BQ96DA0 208 aa13.68□□□□□ -0.22
LINC01116-202ENST00000339037 NUF2Q9BZD4 464 aa13.68□□□□□ -0.22
LINC01116-202ENST00000339037 DPY30Q9C005 99 aa13.68□□□□□ -0.22
LINC01116-202ENST00000339037 SAP130Q9H0E3 1048 aa13.68□□□□□ -0.22
LINC01116-202ENST00000339037 SLC17A5Q9NRA2 495 aa13.68□□□□□ -0.22
LINC01116-202ENST00000339037 SLC7A10Q9NS82 523 aa13.68□□□□□ -0.22
LINC01116-202ENST00000339037 HAO1Q9UJM8 370 aa13.68□□□□□ -0.22
LINC01116-202ENST00000339037 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.68□□□□□ -0.22
LINC01116-202ENST00000339037 FLVCR1Q9Y5Y0 555 aa13.68□□□□□ -0.22
LINC01116-202ENST00000339037 FKBP7Q9Y680 259 aa13.68□□□□□ -0.22
LINC01116-202ENST00000339037 MALRD1Q5VYJ5 2156 aa13.68□□□□□ -0.22
LINC01116-202ENST00000339037 HEATR1Q9H583 2144 aaKnown RBP13.67□□□□□ -0.22
LINC01116-202ENST00000339037 SRD5A1P18405 259 aa13.67□□□□□ -0.22
LINC01116-202ENST00000339037 UQCRC2P22695 453 aa13.67□□□□□ -0.22
LINC01116-202ENST00000339037 IDH2P48735 452 aaKnown RBP13.67□□□□□ -0.22
LINC01116-202ENST00000339037 KHKP50053 298 aa13.67□□□□□ -0.22
LINC01116-202ENST00000339037 SLC35A1P78382 337 aa13.67□□□□□ -0.22
LINC01116-202ENST00000339037 KCNJ10P78508 379 aa13.67□□□□□ -0.22
LINC01116-202ENST00000339037 PLAURQ03405 335 aa13.67□□□□□ -0.22
LINC01116-202ENST00000339037 BST1Q10588 318 aa13.67□□□□□ -0.22
LINC01116-202ENST00000339037 GGTLC2Q14390 218 aa13.67□□□□□ -0.22
LINC01116-202ENST00000339037 GPAT3Q53EU6 434 aa13.67□□□□□ -0.22
LINC01116-202ENST00000339037 C1QTNF12Q5T7M4 302 aa13.67□□□□□ -0.22
LINC01116-202ENST00000339037 AP1ARQ63HQ0 302 aa13.67□□□□□ -0.22
LINC01116-202ENST00000339037 VPS37AQ8NEZ2 397 aa13.67□□□□□ -0.22
LINC01116-202ENST00000339037 DDIT4LQ96D03 193 aa13.67□□□□□ -0.22
LINC01116-202ENST00000339037 NAA11Q9BSU3 229 aaPredicted RBP13.67□□□□□ -0.22
LINC01116-202ENST00000339037 CHODLQ9H9P2 273 aa13.67□□□□□ -0.22
LINC01116-202ENST00000339037 KCNK9Q9NPC2 374 aa13.67□□□□□ -0.22
LINC01116-202ENST00000339037 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.67□□□□□ -0.22
LINC01116-202ENST00000339037 PNPOQ9NVS9 261 aa13.67□□□□□ -0.22
LINC01116-202ENST00000339037 KCNS2Q9ULS6 477 aa13.67□□□□□ -0.22
LINC01116-202ENST00000339037 YLPM1P49750 1951 aaKnown RBP13.66□□□□□ -0.22
LINC01116-202ENST00000339037 TMED7-TICAM2A0A0A6YYA0 188 aa13.66□□□□□ -0.22
LINC01116-202ENST00000339037 PRSS51A0A1B0GVH4 220 aa13.66□□□□□ -0.22
LINC01116-202ENST00000339037 TMEM229AB2RXF0 380 aa13.66□□□□□ -0.22
LINC01116-202ENST00000339037 NDUFS8O00217 210 aa13.66□□□□□ -0.22
LINC01116-202ENST00000339037 ZNF208O43345 1280 aa13.66□□□□□ -0.22
LINC01116-202ENST00000339037 CPSF4O95639 269 aaKnown RBP13.66□□□□□ -0.22
LINC01116-202ENST00000339037 WNT11O96014 354 aa13.66□□□□□ -0.22
LINC01116-202ENST00000339037 C1QCP02747 245 aa13.66□□□□□ -0.22
LINC01116-202ENST00000339037 C8BP07358 591 aa13.66□□□□□ -0.22
LINC01116-202ENST00000339037 IGFBP5P24593 272 aa13.66□□□□□ -0.22
LINC01116-202ENST00000339037 MPGP29372 298 aa13.66□□□□□ -0.22
LINC01116-202ENST00000339037 CHI3L1P36222 383 aaPredicted RBP13.66□□□□□ -0.22
LINC01116-202ENST00000339037 PDLIM4P50479 330 aa13.66□□□□□ -0.22
LINC01116-202ENST00000339037 POLR2HP52434 150 aaKnown RBP13.66□□□□□ -0.22
LINC01116-202ENST00000339037 PRPS1P60891 318 aa13.66□□□□□ -0.22
LINC01116-202ENST00000339037 STX3Q13277 289 aa13.66□□□□□ -0.22
LINC01116-202ENST00000339037 SLC17A1Q14916 467 aa13.66□□□□□ -0.22
LINC01116-202ENST00000339037 SPANXN4Q5MJ08 99 aa13.66□□□□□ -0.22
LINC01116-202ENST00000339037 TSPO2Q5TGU0 170 aa13.66□□□□□ -0.22
LINC01116-202ENST00000339037 ANXA8L1Q5VT79 327 aa13.66□□□□□ -0.22
LINC01116-202ENST00000339037 SAXO2Q658L1 398 aa13.66□□□□□ -0.22
LINC01116-202ENST00000339037 FAM166AQ6J272 317 aa13.66□□□□□ -0.22
LINC01116-202ENST00000339037 PAQR6Q6TCH4 344 aa13.66□□□□□ -0.22
LINC01116-202ENST00000339037 CNOT9Q92600 299 aaKnown RBP13.66□□□□□ -0.22
LINC01116-202ENST00000339037 PMM1Q92871 262 aa13.66□□□□□ -0.22
LINC01116-202ENST00000339037 TESCQ96BS2 214 aa13.66□□□□□ -0.22
LINC01116-202ENST00000339037 FBXO17Q96EF6 278 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms