RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 DTX4Q9Y2E6 619 aa11.33□□□□□ -0.6
VPS33B-201ENST00000333371 NUBP2Q9Y5Y2 271 aa11.33□□□□□ -0.6
VPS33B-201ENST00000333371 TRBV2A0A0J9YWF9 115 aa11.32□□□□□ -0.6
VPS33B-201ENST00000333371 A0A1B0GVT2 93 aa11.32□□□□□ -0.6
VPS33B-201ENST00000333371 GPR171O14626 319 aa11.32□□□□□ -0.6
VPS33B-201ENST00000333371 FLRT2O43155 660 aa11.32□□□□□ -0.6
VPS33B-201ENST00000333371 BRINP1O60477 761 aa11.32□□□□□ -0.6
VPS33B-201ENST00000333371 UBL3O95164 117 aa11.32□□□□□ -0.6
VPS33B-201ENST00000333371 H2AFB2P0C5Z0 115 aa11.32□□□□□ -0.6
VPS33B-201ENST00000333371 SELENOPP49908 381 aa11.32□□□□□ -0.6
VPS33B-201ENST00000333371 ZP1P60852 638 aa11.32□□□□□ -0.6
VPS33B-201ENST00000333371 GPR18Q14330 331 aa11.32□□□□□ -0.6
VPS33B-201ENST00000333371 CDK5R1Q15078 307 aa11.32□□□□□ -0.6
VPS33B-201ENST00000333371 DEFB110Q30KQ9 67 aa11.32□□□□□ -0.6
VPS33B-201ENST00000333371 LGALSLQ3ZCW2 172 aaPredicted RBP11.32□□□□□ -0.6
VPS33B-201ENST00000333371 SMUG1Q53HV7 270 aa11.32□□□□□ -0.6
VPS33B-201ENST00000333371 TOR2AQ5JU69 321 aa11.32□□□□□ -0.6
VPS33B-201ENST00000333371 SIGIRRQ6IA17 410 aa11.32□□□□□ -0.6
VPS33B-201ENST00000333371 SLC38A6Q8IZM9 456 aa11.32□□□□□ -0.6
VPS33B-201ENST00000333371 CMTM4Q8IZR5 234 aa11.32□□□□□ -0.6
VPS33B-201ENST00000333371 PIAS4Q8N2W9 510 aaPredicted RBP11.32□□□□□ -0.6
VPS33B-201ENST00000333371 ZNF433Q8N7K0 673 aaPredicted RBP11.32□□□□□ -0.6
VPS33B-201ENST00000333371 CDRT4Q8N9R6 151 aa11.32□□□□□ -0.6
VPS33B-201ENST00000333371 ZNF527Q8NB42 609 aa11.32□□□□□ -0.6
VPS33B-201ENST00000333371 OR52R1Q8NGF1 315 aa11.32□□□□□ -0.6
VPS33B-201ENST00000333371 SUN5Q8TC36 379 aa11.32□□□□□ -0.6
VPS33B-201ENST00000333371 HAVCR2Q8TDQ0 301 aa11.32□□□□□ -0.6
VPS33B-201ENST00000333371 NMNAT3Q96T66 252 aa11.32□□□□□ -0.6
VPS33B-201ENST00000333371 GFI1Q99684 422 aa11.32□□□□□ -0.6
VPS33B-201ENST00000333371 DUSP22Q9NRW4 184 aa11.32□□□□□ -0.6
VPS33B-201ENST00000333371 ANKRD10Q9NXR5 420 aa11.32□□□□□ -0.6
VPS33B-201ENST00000333371 ELF5Q9UKW6 265 aaPredicted RBP11.32□□□□□ -0.6
VPS33B-201ENST00000333371 BRWD1Q9NSI6 2320 aa11.32□□□□□ -0.6
VPS33B-201ENST00000333371 A0A1W2PQF6 199 aa11.32□□□□□ -0.6
VPS33B-201ENST00000333371 PRR32B1ATL7 298 aa11.32□□□□□ -0.6
VPS33B-201ENST00000333371 SSNA1O43805 119 aa11.32□□□□□ -0.6
VPS33B-201ENST00000333371 CDC123O75794 336 aaPredicted RBP11.32□□□□□ -0.6
VPS33B-201ENST00000333371 SLC22A5O76082 557 aa11.32□□□□□ -0.6
VPS33B-201ENST00000333371 MPC2O95563 127 aa11.32□□□□□ -0.6
VPS33B-201ENST00000333371 EDNRAP25101 427 aa11.32□□□□□ -0.6
VPS33B-201ENST00000333371 GDNFP39905 211 aa11.32□□□□□ -0.6
VPS33B-201ENST00000333371 ACAA2P42765 397 aaKnown RBP11.32□□□□□ -0.6
VPS33B-201ENST00000333371 ZNF81P51508 661 aa11.32□□□□□ -0.6
VPS33B-201ENST00000333371 SNTB2Q13425 540 aaKnown RBP11.32□□□□□ -0.6
VPS33B-201ENST00000333371 LINGO2Q7L985 606 aa11.32□□□□□ -0.6
VPS33B-201ENST00000333371 OR6K6Q8NGW6 343 aa11.32□□□□□ -0.6
VPS33B-201ENST00000333371 INPP5EQ9NRR6 644 aa11.32□□□□□ -0.6
VPS33B-201ENST00000333371 C2orf42Q9NWW7 574 aa11.32□□□□□ -0.6
VPS33B-201ENST00000333371 CYR61O00622 381 aa11.31□□□□□ -0.6
VPS33B-201ENST00000333371 PIN1P1O15428 100 aa11.31□□□□□ -0.6
VPS33B-201ENST00000333371 CBX7O95931 251 aa11.31□□□□□ -0.6
VPS33B-201ENST00000333371 MMP15P51511 669 aa11.31□□□□□ -0.6
VPS33B-201ENST00000333371 TAS2R43P59537 309 aa11.31□□□□□ -0.6
VPS33B-201ENST00000333371 ESCO2Q56NI9 601 aa11.31□□□□□ -0.6
VPS33B-201ENST00000333371 KIRREL2Q6UWL6 708 aa11.31□□□□□ -0.6
VPS33B-201ENST00000333371 RTL4Q6ZR62 310 aa11.31□□□□□ -0.6
VPS33B-201ENST00000333371 CCDC28AQ8IWP9 274 aa11.31□□□□□ -0.6
VPS33B-201ENST00000333371 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.31□□□□□ -0.6
VPS33B-201ENST00000333371 SNX33Q8WV41 574 aa11.31□□□□□ -0.6
VPS33B-201ENST00000333371 RASD2Q96D21 266 aa11.31□□□□□ -0.6
VPS33B-201ENST00000333371 SMIM19Q96E16 107 aa11.31□□□□□ -0.6
VPS33B-201ENST00000333371 WDR89Q96FK6 387 aaPredicted RBP11.31□□□□□ -0.6
VPS33B-201ENST00000333371 CHIAQ9BZP6 476 aa11.31□□□□□ -0.6
VPS33B-201ENST00000333371 NARFLQ9H6Q4 476 aa11.31□□□□□ -0.6
VPS33B-201ENST00000333371 EMC7Q9NPA0 242 aa11.31□□□□□ -0.6
VPS33B-201ENST00000333371 NOX4Q9NPH5 578 aa11.31□□□□□ -0.6
VPS33B-201ENST00000333371 ACTR10Q9NZ32 417 aa11.31□□□□□ -0.6
VPS33B-201ENST00000333371 SCML1Q9UN30 329 aa11.31□□□□□ -0.6
VPS33B-201ENST00000333371 RCE1Q9Y256 329 aa11.31□□□□□ -0.6
VPS33B-201ENST00000333371 HEBP2Q9Y5Z4 205 aa11.31□□□□□ -0.6
VPS33B-201ENST00000333371 RDH16O75452 317 aa11.31□□□□□ -0.6
VPS33B-201ENST00000333371 GPR75O95800 540 aa11.31□□□□□ -0.6
VPS33B-201ENST00000333371 CFDP00746 253 aaPredicted RBP11.31□□□□□ -0.6
VPS33B-201ENST00000333371 RAF1P04049 648 aa11.31□□□□□ -0.6
VPS33B-201ENST00000333371 ATP1B1P05026 303 aa11.31□□□□□ -0.6
VPS33B-201ENST00000333371 ZNF250P15622 560 aa11.31□□□□□ -0.6
VPS33B-201ENST00000333371 RPS15P62841 145 aaKnown RBP11.31□□□□□ -0.6
VPS33B-201ENST00000333371 SIRPAP78324 504 aa11.31□□□□□ -0.6
VPS33B-201ENST00000333371 CAMK2DQ13557 499 aa11.31□□□□□ -0.6
VPS33B-201ENST00000333371 HTR4Q13639 388 aa11.31□□□□□ -0.6
VPS33B-201ENST00000333371 KLF9Q13886 244 aaPredicted RBP11.31□□□□□ -0.6
VPS33B-201ENST00000333371 EXOSC6Q5RKV6 272 aaKnown RBP11.31□□□□□ -0.6
VPS33B-201ENST00000333371 Q6ZTK2 550 aa11.31□□□□□ -0.6
VPS33B-201ENST00000333371 SIX5Q8N196 739 aa11.31□□□□□ -0.6
VPS33B-201ENST00000333371 CEP76Q8TAP6 659 aa11.31□□□□□ -0.6
VPS33B-201ENST00000333371 CCDC120Q96HB5 630 aa11.31□□□□□ -0.6
VPS33B-201ENST00000333371 TRAF4Q9BUZ4 470 aaPredicted RBP11.31□□□□□ -0.6
VPS33B-201ENST00000333371 EIF3KQ9UBQ5 218 aaKnown RBP11.31□□□□□ -0.6
VPS33B-201ENST00000333371 KLK11Q9UBX7 282 aa11.31□□□□□ -0.6
VPS33B-201ENST00000333371 NPFFR2Q9Y5X5 522 aa11.31□□□□□ -0.6
VPS33B-201ENST00000333371 PIAS3Q9Y6X2 628 aa11.31□□□□□ -0.6
VPS33B-201ENST00000333371 HRGP04196 525 aa11.3□□□□□ -0.6
VPS33B-201ENST00000333371 SLC6A6P31641 620 aa11.3□□□□□ -0.6
VPS33B-201ENST00000333371 NANOS3P60323 173 aaKnown RBP11.3□□□□□ -0.6
VPS33B-201ENST00000333371 PSG6Q00889 435 aa11.3□□□□□ -0.6
VPS33B-201ENST00000333371 CD276Q5ZPR3 534 aa11.3□□□□□ -0.6
VPS33B-201ENST00000333371 RPL13AP3Q6NVV1 102 aa11.3□□□□□ -0.6
VPS33B-201ENST00000333371 SLC35F2Q8IXU6 374 aa11.3□□□□□ -0.6
VPS33B-201ENST00000333371 MS4A15Q8N5U1 240 aa11.3□□□□□ -0.6
VPS33B-201ENST00000333371 MED30Q96HR3 178 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms