RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 ANTXRLA6NF34 631 aa7.46□□□□□ -1.22
LIMD1-201ENST00000273317 FZD7O75084 574 aa7.46□□□□□ -1.22
LIMD1-201ENST00000273317 SNAI1O95863 264 aaPredicted RBP7.46□□□□□ -1.22
LIMD1-201ENST00000273317 ALPLP05186 524 aa7.46□□□□□ -1.22
LIMD1-201ENST00000273317 WDTC1Q8N5D0 677 aa7.46□□□□□ -1.22
LIMD1-201ENST00000273317 PCYT2Q99447 389 aa7.46□□□□□ -1.22
LIMD1-201ENST00000273317 ARAP2Q8WZ64 1704 aa7.46□□□□□ -1.22
LIMD1-201ENST00000273317 HLA-DOBP13765 273 aa7.46□□□□□ -1.22
LIMD1-201ENST00000273317 OTX2P32243 289 aa7.46□□□□□ -1.22
LIMD1-201ENST00000273317 SPCS2Q15005 226 aa7.46□□□□□ -1.22
LIMD1-201ENST00000273317 SLX4IPQ5VYV7 408 aa7.46□□□□□ -1.22
LIMD1-201ENST00000273317 HMGN2P46Q86SG4 172 aa7.46□□□□□ -1.22
LIMD1-201ENST00000273317 SDSLQ96GA7 329 aa7.46□□□□□ -1.22
LIMD1-201ENST00000273317 IL26Q9NPH9 171 aa7.46□□□□□ -1.22
LIMD1-201ENST00000273317 FBXL4Q9UKA2 621 aa7.46□□□□□ -1.22
LIMD1-201ENST00000273317 CA5BQ9Y2D0 317 aa7.46□□□□□ -1.22
LIMD1-201ENST00000273317 NRXN3Q9Y4C0 1643 aa7.46□□□□□ -1.22
LIMD1-201ENST00000273317 ARHGAP33O14559 1287 aa7.46□□□□□ -1.22
LIMD1-201ENST00000273317 AGPAT2O15120 278 aa7.46□□□□□ -1.22
LIMD1-201ENST00000273317 SNRPGP62308 76 aaKnown RBP7.46□□□□□ -1.22
LIMD1-201ENST00000273317 PIN1Q13526 163 aaPredicted RBP7.46□□□□□ -1.22
LIMD1-201ENST00000273317 GPR18Q14330 331 aa7.46□□□□□ -1.22
LIMD1-201ENST00000273317 EXOSC6Q5RKV6 272 aaKnown RBP7.46□□□□□ -1.22
LIMD1-201ENST00000273317 TCEAL8Q8IYN2 117 aa7.46□□□□□ -1.22
LIMD1-201ENST00000273317 RHOXF1Q8NHV9 184 aa7.46□□□□□ -1.22
LIMD1-201ENST00000273317 FBXO27Q8NI29 283 aa7.46□□□□□ -1.22
LIMD1-201ENST00000273317 FAM71F1Q96KD3 344 aaPredicted RBP7.46□□□□□ -1.22
LIMD1-201ENST00000273317 DDAH2O95865 285 aa7.45□□□□□ -1.22
LIMD1-201ENST00000273317 NAGAP17050 411 aa7.45□□□□□ -1.22
LIMD1-201ENST00000273317 AOAHP28039 575 aa7.45□□□□□ -1.22
LIMD1-201ENST00000273317 MLF1P58340 268 aa7.45□□□□□ -1.22
LIMD1-201ENST00000273317 SRYQ05066 204 aa7.45□□□□□ -1.22
LIMD1-201ENST00000273317 OR1Q1Q15612 314 aa7.45□□□□□ -1.22
LIMD1-201ENST00000273317 FAM122CQ6P4D5 195 aa7.45□□□□□ -1.22
LIMD1-201ENST00000273317 TMEM151BQ8IW70 566 aa7.45□□□□□ -1.22
LIMD1-201ENST00000273317 GCNT2Q8N0V5 402 aa7.45□□□□□ -1.22
LIMD1-201ENST00000273317 CDS1Q92903 461 aa7.45□□□□□ -1.22
LIMD1-201ENST00000273317 RSPRY1Q96DX4 576 aa7.45□□□□□ -1.22
LIMD1-201ENST00000273317 SLC29A1Q99808 456 aa7.45□□□□□ -1.22
LIMD1-201ENST00000273317 DDX31Q9H8H2 851 aaKnown RBP7.45□□□□□ -1.22
LIMD1-201ENST00000273317 OLAHQ9NV23 265 aa7.45□□□□□ -1.22
LIMD1-201ENST00000273317 BTAF1O14981 1849 aa7.45□□□□□ -1.22
LIMD1-201ENST00000273317 ALS2Q96Q42 1657 aa7.45□□□□□ -1.22
LIMD1-201ENST00000273317 HEPACAM2A8MVW5 462 aa7.45□□□□□ -1.22
LIMD1-201ENST00000273317 FABP1P07148 127 aa7.45□□□□□ -1.22
LIMD1-201ENST00000273317 CNR1P21554 472 aa7.45□□□□□ -1.22
LIMD1-201ENST00000273317 CD68P34810 354 aaPredicted RBP7.45□□□□□ -1.22
LIMD1-201ENST00000273317 C18orf21Q32NC0 220 aaPredicted RBP7.45□□□□□ -1.22
LIMD1-201ENST00000273317 PAPD4Q6PIY7 484 aaKnown RBP7.45□□□□□ -1.22
LIMD1-201ENST00000273317 C16orf70Q9BSU1 422 aa7.45□□□□□ -1.22
LIMD1-201ENST00000273317 A4GALTQ9NPC4 353 aa7.45□□□□□ -1.22
LIMD1-201ENST00000273317 NCDNQ9UBB6 729 aa7.45□□□□□ -1.22
LIMD1-201ENST00000273317 CSNK1G3Q9Y6M4 447 aa7.45□□□□□ -1.22
LIMD1-201ENST00000273317 SEC14L5O43304 696 aa7.45□□□□□ -1.22
LIMD1-201ENST00000273317 B3GALNT1O75752 331 aa7.45□□□□□ -1.22
LIMD1-201ENST00000273317 SNRNP70P08621 437 aaKnown RBP7.45□□□□□ -1.22
LIMD1-201ENST00000273317 TMEM41BQ5BJD5 291 aa7.45□□□□□ -1.22
LIMD1-201ENST00000273317 FCRLBQ6BAA4 426 aa7.45□□□□□ -1.22
LIMD1-201ENST00000273317 PXT1Q8NFP0 134 aa7.45□□□□□ -1.22
LIMD1-201ENST00000273317 PSMF1Q92530 271 aa7.45□□□□□ -1.22
LIMD1-201ENST00000273317 MRPL38Q96DV4 380 aaKnown RBP7.45□□□□□ -1.22
LIMD1-201ENST00000273317 PDLIM5Q96HC4 596 aaKnown RBP7.45□□□□□ -1.22
LIMD1-201ENST00000273317 ZNF582Q96NG8 517 aaPredicted RBP7.45□□□□□ -1.22
LIMD1-201ENST00000273317 LHX6Q9UPM6 363 aa7.45□□□□□ -1.22
LIMD1-201ENST00000273317 PRAMEF26H0Y7S4 382 aa7.45□□□□□ -1.22
LIMD1-201ENST00000273317 CLN5O75503 358 aa7.45□□□□□ -1.22
LIMD1-201ENST00000273317 CD79AP11912 226 aa7.45□□□□□ -1.22
LIMD1-201ENST00000273317 HLA-DMAP28067 261 aa7.45□□□□□ -1.22
LIMD1-201ENST00000273317 CXADRP78310 365 aa7.45□□□□□ -1.22
LIMD1-201ENST00000273317 OR11L1Q8NGX0 322 aa7.45□□□□□ -1.22
LIMD1-201ENST00000273317 LGALS14Q8TCE9 139 aa7.45□□□□□ -1.22
LIMD1-201ENST00000273317 DTD2Q96FN9 168 aa7.45□□□□□ -1.22
LIMD1-201ENST00000273317 GABRR3A8MPY1 467 aa7.45□□□□□ -1.22
LIMD1-201ENST00000273317 F6UZH7 168 aa7.45□□□□□ -1.22
LIMD1-201ENST00000273317 PMS2P2O95744 297 aa7.45□□□□□ -1.22
LIMD1-201ENST00000273317 OR2T7P0C7T2 308 aa7.45□□□□□ -1.22
LIMD1-201ENST00000273317 TRAPPC2P0DI81 140 aa7.45□□□□□ -1.22
LIMD1-201ENST00000273317 TRAPPC2BP0DI82 140 aa7.45□□□□□ -1.22
LIMD1-201ENST00000273317 PSMB1P20618 241 aaKnown RBP7.45□□□□□ -1.22
LIMD1-201ENST00000273317 IL3RAP26951 378 aa7.45□□□□□ -1.22
LIMD1-201ENST00000273317 TAGLNQ01995 201 aaKnown RBP7.45□□□□□ -1.22
LIMD1-201ENST00000273317 SFRP5Q5T4F7 317 aa7.45□□□□□ -1.22
LIMD1-201ENST00000273317 MAMDC4Q6UXC1 1216 aa7.45□□□□□ -1.22
LIMD1-201ENST00000273317 OR2T27Q8NH04 317 aa7.45□□□□□ -1.22
LIMD1-201ENST00000273317 MITD1Q8WV92 249 aa7.45□□□□□ -1.22
LIMD1-201ENST00000273317 BOKQ9UMX3 212 aaPredicted RBP7.45□□□□□ -1.22
LIMD1-201ENST00000273317 KLK4Q9Y5K2 254 aa7.45□□□□□ -1.22
LIMD1-201ENST00000273317 FOCADQ5VW36 1801 aa7.45□□□□□ -1.22
LIMD1-201ENST00000273317 E9PI62 339 aa7.45□□□□□ -1.22
LIMD1-201ENST00000273317 SOHLH1Q5JUK2 328 aa7.45□□□□□ -1.22
LIMD1-201ENST00000273317 PAGE3Q5JUK9 113 aa7.45□□□□□ -1.22
LIMD1-201ENST00000273317 MRPL10Q7Z7H8 261 aaKnown RBP7.45□□□□□ -1.22
LIMD1-201ENST00000273317 OR2L13Q8N349 312 aa7.45□□□□□ -1.22
LIMD1-201ENST00000273317 C15orf54Q8N8G6 183 aa7.45□□□□□ -1.22
LIMD1-201ENST00000273317 OR1S2Q8NGQ3 325 aa7.45□□□□□ -1.22
LIMD1-201ENST00000273317 CHTF18Q8WVB6 975 aa7.45□□□□□ -1.22
LIMD1-201ENST00000273317 TGIF2Q9GZN2 237 aa7.45□□□□□ -1.22
LIMD1-201ENST00000273317 OR52D1Q9H346 318 aa7.45□□□□□ -1.22
LIMD1-201ENST00000273317 IL23AQ9NPF7 189 aa7.45□□□□□ -1.22
LIMD1-201ENST00000273317 CAMK2AQ9UQM7 478 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms