RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 FAM157CP0CG43 387 aa7.82□□□□□ -1.16
TPM3-201ENST00000271850 IGFBP5P24593 272 aa7.82□□□□□ -1.16
TPM3-201ENST00000271850 PTAFRP25105 342 aa7.82□□□□□ -1.16
TPM3-201ENST00000271850 SERPINB5P36952 375 aa7.82□□□□□ -1.16
TPM3-201ENST00000271850 IDH2P48735 452 aaKnown RBP7.82□□□□□ -1.16
TPM3-201ENST00000271850 MVDP53602 400 aa7.82□□□□□ -1.16
TPM3-201ENST00000271850 CSNK2A1P68400 391 aaPredicted RBP7.82□□□□□ -1.16
TPM3-201ENST00000271850 KCNJ10P78508 379 aa7.82□□□□□ -1.16
TPM3-201ENST00000271850 MPP2Q14168 576 aa7.82□□□□□ -1.16
TPM3-201ENST00000271850 NRF1Q16656 503 aa7.82□□□□□ -1.16
TPM3-201ENST00000271850 SWI5Q1ZZU3 235 aa7.82□□□□□ -1.16
TPM3-201ENST00000271850 CHRFAM7AQ494W8 412 aa7.82□□□□□ -1.16
TPM3-201ENST00000271850 NKAPLQ5M9Q1 402 aa7.82□□□□□ -1.16
TPM3-201ENST00000271850 COX20Q5RI15 118 aa7.82□□□□□ -1.16
TPM3-201ENST00000271850 PODNL1Q6PEZ8 512 aa7.82□□□□□ -1.16
TPM3-201ENST00000271850 SLC22A25Q6T423 547 aa7.82□□□□□ -1.16
TPM3-201ENST00000271850 TMEM108Q6UXF1 575 aa7.82□□□□□ -1.16
TPM3-201ENST00000271850 IL17RELQ6ZVW7 336 aa7.82□□□□□ -1.16
TPM3-201ENST00000271850 C16orf62Q7Z3J2 963 aa7.82□□□□□ -1.16
TPM3-201ENST00000271850 UBE2J2Q8N2K1 259 aa7.82□□□□□ -1.16
TPM3-201ENST00000271850 XAGE5Q8WWM1 108 aa7.82□□□□□ -1.16
TPM3-201ENST00000271850 TMEM234Q8WY98 164 aa7.82□□□□□ -1.16
TPM3-201ENST00000271850 MUCL1Q96DR8 90 aa7.82□□□□□ -1.16
TPM3-201ENST00000271850 RHNO1Q9BSD3 238 aa7.82□□□□□ -1.16
TPM3-201ENST00000271850 INPP5KQ9BT40 448 aa7.82□□□□□ -1.16
TPM3-201ENST00000271850 NELFAQ9H3P2 528 aa7.82□□□□□ -1.16
TPM3-201ENST00000271850 SEC61A2Q9H9S3 476 aa7.82□□□□□ -1.16
TPM3-201ENST00000271850 SLC17A5Q9NRA2 495 aa7.82□□□□□ -1.16
TPM3-201ENST00000271850 SLC6A13Q9NSD5 602 aa7.82□□□□□ -1.16
TPM3-201ENST00000271850 ASB6Q9NWX5 421 aa7.82□□□□□ -1.16
TPM3-201ENST00000271850 SLC35A3Q9Y2D2 325 aa7.82□□□□□ -1.16
TPM3-201ENST00000271850 HDGFL3Q9Y3E1 203 aa7.82□□□□□ -1.16
TPM3-201ENST00000271850 HEATR1Q9H583 2144 aaKnown RBP7.81□□□□□ -1.16
TPM3-201ENST00000271850 TMED7-TICAM2A0A0A6YYA0 188 aa7.81□□□□□ -1.16
TPM3-201ENST00000271850 PRSS51A0A1B0GVH4 220 aa7.81□□□□□ -1.16
TPM3-201ENST00000271850 CIB4A0PJX0 185 aa7.81□□□□□ -1.16
TPM3-201ENST00000271850 WDR91A4D1P6 747 aa7.81□□□□□ -1.16
TPM3-201ENST00000271850 AGAP5A6NIR3 686 aa7.81□□□□□ -1.16
TPM3-201ENST00000271850 DUXAA6NLW8 204 aa7.81□□□□□ -1.16
TPM3-201ENST00000271850 CCT8L1PA6NM43 557 aa7.81□□□□□ -1.16
TPM3-201ENST00000271850 DNPH1O43598 174 aa7.81□□□□□ -1.16
TPM3-201ENST00000271850 CPSF4O95639 269 aaKnown RBP7.81□□□□□ -1.16
TPM3-201ENST00000271850 IGFBP1P08833 259 aaPredicted RBP7.81□□□□□ -1.16
TPM3-201ENST00000271850 DHRS4L1P0CG22 281 aa7.81□□□□□ -1.16
TPM3-201ENST00000271850 TFPIP10646 304 aa7.81□□□□□ -1.16
TPM3-201ENST00000271850 UQCRC2P22695 453 aa7.81□□□□□ -1.16
TPM3-201ENST00000271850 TACR3P29371 465 aa7.81□□□□□ -1.16
TPM3-201ENST00000271850 FABP6P51161 128 aa7.81□□□□□ -1.16
TPM3-201ENST00000271850 OR2B6P58173 313 aa7.81□□□□□ -1.16
TPM3-201ENST00000271850 EPS8Q12929 822 aa7.81□□□□□ -1.16
TPM3-201ENST00000271850 SMU1Q2TAY7 513 aa7.81□□□□□ -1.16
TPM3-201ENST00000271850 HIKESHIQ53FT3 197 aa7.81□□□□□ -1.16
TPM3-201ENST00000271850 ZNF544Q6NX49 715 aa7.81□□□□□ -1.16
TPM3-201ENST00000271850 BHLHB9Q6PI77 547 aa7.81□□□□□ -1.16
TPM3-201ENST00000271850 CASP12Q6UXS9 341 aa7.81□□□□□ -1.16
TPM3-201ENST00000271850 MYPOPQ86VE0 399 aaPredicted RBP7.81□□□□□ -1.16
TPM3-201ENST00000271850 RNF130Q86XS8 419 aa7.81□□□□□ -1.16
TPM3-201ENST00000271850 RIBC1Q8N443 379 aaPredicted RBP7.81□□□□□ -1.16
TPM3-201ENST00000271850 ZNF563Q8TA94 476 aa7.81□□□□□ -1.16
TPM3-201ENST00000271850 PIGXQ8TBF5 258 aa7.81□□□□□ -1.16
TPM3-201ENST00000271850 AENQ8WTP8 325 aaKnown RBP7.81□□□□□ -1.16
TPM3-201ENST00000271850 TESCQ96BS2 214 aa7.81□□□□□ -1.16
TPM3-201ENST00000271850 RADILQ96JH8 1075 aa7.81□□□□□ -1.16
TPM3-201ENST00000271850 CCDC115Q96NT0 180 aa7.81□□□□□ -1.16
TPM3-201ENST00000271850 SORCS2Q96PQ0 1159 aa7.81□□□□□ -1.16
TPM3-201ENST00000271850 PRPF18Q99633 342 aaKnown RBP7.81□□□□□ -1.16
TPM3-201ENST00000271850 SLC35A5Q9BS91 424 aa7.81□□□□□ -1.16
TPM3-201ENST00000271850 ADAM19Q9H013 955 aa7.81□□□□□ -1.16
TPM3-201ENST00000271850 POLE3Q9NRF9 147 aa7.81□□□□□ -1.16
TPM3-201ENST00000271850 SERINC1Q9NRX5 453 aa7.81□□□□□ -1.16
TPM3-201ENST00000271850 FAIMQ9NVQ4 179 aa7.81□□□□□ -1.16
TPM3-201ENST00000271850 RLIMQ9NVW2 624 aa7.81□□□□□ -1.16
TPM3-201ENST00000271850 TMEM160Q9NX00 188 aa7.81□□□□□ -1.16
TPM3-201ENST00000271850 EMC3Q9P0I2 261 aa7.81□□□□□ -1.16
TPM3-201ENST00000271850 TMEM181Q9P2C4 612 aa7.81□□□□□ -1.16
TPM3-201ENST00000271850 HAO1Q9UJM8 370 aa7.81□□□□□ -1.16
TPM3-201ENST00000271850 DCTN4Q9UJW0 460 aa7.81□□□□□ -1.16
TPM3-201ENST00000271850 MGAT4BQ9UQ53 548 aa7.81□□□□□ -1.16
TPM3-201ENST00000271850 TRAPPC4Q9Y296 219 aa7.81□□□□□ -1.16
TPM3-201ENST00000271850 TMED7Q9Y3B3 224 aa7.81□□□□□ -1.16
TPM3-201ENST00000271850 IGHV1-18A0A0C4DH31 117 aa7.8□□□□□ -1.16
TPM3-201ENST00000271850 IGHV4-61A0A0C4DH41 118 aa7.8□□□□□ -1.16
TPM3-201ENST00000271850 ZNF503-AS2A6NEH8 195 aa7.8□□□□□ -1.16
TPM3-201ENST00000271850 LIPT2A6NK58 231 aa7.8□□□□□ -1.16
TPM3-201ENST00000271850 FAAHO00519 579 aa7.8□□□□□ -1.16
TPM3-201ENST00000271850 ZNF208O43345 1280 aa7.8□□□□□ -1.16
TPM3-201ENST00000271850 MRPL33O75394 65 aaKnown RBP7.8□□□□□ -1.16
TPM3-201ENST00000271850 SLC25A16P16260 332 aa7.8□□□□□ -1.16
TPM3-201ENST00000271850 CALCRP30988 508 aa7.8□□□□□ -1.16
TPM3-201ENST00000271850 ACAA2P42765 397 aaKnown RBP7.8□□□□□ -1.16
TPM3-201ENST00000271850 NME5P56597 212 aa7.8□□□□□ -1.16
TPM3-201ENST00000271850 ABCE1P61221 599 aaKnown RBP7.8□□□□□ -1.16
TPM3-201ENST00000271850 UFM1P61960 85 aa7.8□□□□□ -1.16
TPM3-201ENST00000271850 BNIP2Q12982 314 aa7.8□□□□□ -1.16
TPM3-201ENST00000271850 CHI3L2Q15782 390 aa7.8□□□□□ -1.16
TPM3-201ENST00000271850 FAM174BQ3ZCQ3 159 aa7.8□□□□□ -1.16
TPM3-201ENST00000271850 MRPL2Q5T653 305 aaKnown RBP7.8□□□□□ -1.16
TPM3-201ENST00000271850 CLEC2AQ6UVW9 174 aa7.8□□□□□ -1.16
TPM3-201ENST00000271850 FBXL14Q8N1E6 418 aa7.8□□□□□ -1.16
TPM3-201ENST00000271850 ARFGAP2Q8N6H7 521 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms