RNA–Protein interactions for RNA: ENST00000265036.9

DEPDC1B-201, Transcript of DEP domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1B, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-201ENST00000265036 KRT72Q14CN4 511 aa6.47□□□□□ -1.37
DEPDC1B-201ENST00000265036 RIPPLY2Q5TAB7 128 aa6.47□□□□□ -1.37
DEPDC1B-201ENST00000265036 FAM91A1Q658Y4 838 aa6.47□□□□□ -1.37
DEPDC1B-201ENST00000265036 XKRXQ6PP77 449 aa6.47□□□□□ -1.37
DEPDC1B-201ENST00000265036 TMPPEQ6ZT21 453 aa6.47□□□□□ -1.37
DEPDC1B-201ENST00000265036 FKBP9P1Q75LS8 142 aa6.47□□□□□ -1.37
DEPDC1B-201ENST00000265036 GPAT4Q86UL3 456 aa6.47□□□□□ -1.37
DEPDC1B-201ENST00000265036 MEX3DQ86XN8 651 aaKnown RBP6.47□□□□□ -1.37
DEPDC1B-201ENST00000265036 MCEMP1Q8IX19 187 aa6.47□□□□□ -1.37
DEPDC1B-201ENST00000265036 TUSC5Q8IXB3 177 aa6.47□□□□□ -1.37
DEPDC1B-201ENST00000265036 KDM8Q8N371 416 aa6.47□□□□□ -1.37
DEPDC1B-201ENST00000265036 RNF128Q8TEB7 428 aa6.47□□□□□ -1.37
DEPDC1B-201ENST00000265036 CPNE4Q96A23 557 aaPredicted RBP6.47□□□□□ -1.37
DEPDC1B-201ENST00000265036 ARHGDIGQ99819 225 aa6.47□□□□□ -1.37
DEPDC1B-201ENST00000265036 ADAM19Q9H013 955 aa6.47□□□□□ -1.37
DEPDC1B-201ENST00000265036 KCNJ16Q9NPI9 418 aa6.47□□□□□ -1.37
DEPDC1B-201ENST00000265036 C6orf203Q9P0P8 240 aaPredicted RBP6.47□□□□□ -1.37
DEPDC1B-201ENST00000265036 SLC7A7Q9UM01 511 aa6.47□□□□□ -1.37
DEPDC1B-201ENST00000265036 SLC9A8Q9Y2E8 581 aa6.47□□□□□ -1.37
DEPDC1B-201ENST00000265036 SPIN1Q9Y657 262 aaPredicted RBP6.47□□□□□ -1.37
DEPDC1B-201ENST00000265036 CELSR1Q9NYQ6 3014 aa6.47□□□□□ -1.37
DEPDC1B-201ENST00000265036 IGKV1D-42A0A075B6H8 117 aa6.47□□□□□ -1.37
DEPDC1B-201ENST00000265036 HSPB2A8KAH6 182 aa6.47□□□□□ -1.37
DEPDC1B-201ENST00000265036 ARPC2O15144 300 aa6.47□□□□□ -1.37
DEPDC1B-201ENST00000265036 SERPINI2O75830 405 aa6.47□□□□□ -1.37
DEPDC1B-201ENST00000265036 MT-ND1P03886 318 aa6.47□□□□□ -1.37
DEPDC1B-201ENST00000265036 GGT1P19440 569 aa6.47□□□□□ -1.37
DEPDC1B-201ENST00000265036 CALB2P22676 271 aa6.47□□□□□ -1.37
DEPDC1B-201ENST00000265036 CTSSP25774 331 aa6.47□□□□□ -1.37
DEPDC1B-201ENST00000265036 KIR2DL2P43627 348 aaPredicted RBP6.47□□□□□ -1.37
DEPDC1B-201ENST00000265036 HTR3AP46098 478 aa6.47□□□□□ -1.37
DEPDC1B-201ENST00000265036 TAS2R41P59536 307 aa6.47□□□□□ -1.37
DEPDC1B-201ENST00000265036 LSM11P83369 360 aaKnown RBP eCLIP6.47□□□□□ -1.37
DEPDC1B-201ENST00000265036 HSPB2Q16082 182 aa6.47□□□□□ -1.37
DEPDC1B-201ENST00000265036 PDSS1Q5T2R2 415 aa6.47□□□□□ -1.37
DEPDC1B-201ENST00000265036 GLYATQ6IB77 296 aa6.47□□□□□ -1.37
DEPDC1B-201ENST00000265036 C16orf89Q6UX73 402 aa6.47□□□□□ -1.37
DEPDC1B-201ENST00000265036 CCDC80Q76M96 950 aa6.47□□□□□ -1.37
DEPDC1B-201ENST00000265036 BTLAQ7Z6A9 289 aa6.47□□□□□ -1.37
DEPDC1B-201ENST00000265036 SLC30A8Q8IWU4 369 aa6.47□□□□□ -1.37
DEPDC1B-201ENST00000265036 TMEM99Q8N816 258 aa6.47□□□□□ -1.37
DEPDC1B-201ENST00000265036 LILRB4Q8NHJ6 448 aa6.47□□□□□ -1.37
DEPDC1B-201ENST00000265036 SLC25A43Q8WUT9 341 aaPredicted RBP6.47□□□□□ -1.37
DEPDC1B-201ENST00000265036 ASB5Q8WWX0 329 aa6.47□□□□□ -1.37
DEPDC1B-201ENST00000265036 DDIT4LQ96D03 193 aa6.47□□□□□ -1.37
DEPDC1B-201ENST00000265036 TMEM27Q9HBJ8 222 aa6.47□□□□□ -1.37
DEPDC1B-201ENST00000265036 BAG5Q9UL15 447 aa6.47□□□□□ -1.37
DEPDC1B-201ENST00000265036 hCG_2039718K7EN88 272 aa6.46□□□□□ -1.38
DEPDC1B-201ENST00000265036 SYT5O00445 386 aa6.46□□□□□ -1.38
DEPDC1B-201ENST00000265036 FAAHO00519 579 aa6.46□□□□□ -1.38
DEPDC1B-201ENST00000265036 RCBTB2O95199 551 aa6.46□□□□□ -1.38
DEPDC1B-201ENST00000265036 AHSA1O95433 338 aa6.46□□□□□ -1.38
DEPDC1B-201ENST00000265036 HOXD4P09016 255 aaPredicted RBP6.46□□□□□ -1.38
DEPDC1B-201ENST00000265036 FCGR2AP12318 317 aa6.46□□□□□ -1.38
DEPDC1B-201ENST00000265036 ATP6V1B2P21281 511 aa6.46□□□□□ -1.38
DEPDC1B-201ENST00000265036 AGTR1P30556 359 aa6.46□□□□□ -1.38
DEPDC1B-201ENST00000265036 IDUAP35475 653 aa6.46□□□□□ -1.38
DEPDC1B-201ENST00000265036 CTBP2P56545 445 aa6.46□□□□□ -1.38
DEPDC1B-201ENST00000265036 RAC3P60763 192 aa6.46□□□□□ -1.38
DEPDC1B-201ENST00000265036 TFF3Q07654 80 aa6.46□□□□□ -1.38
DEPDC1B-201ENST00000265036 SF3B4Q15427 424 aaKnown RBP eCLIP6.46□□□□□ -1.38
DEPDC1B-201ENST00000265036 SAMD4BQ5PRF9 694 aaKnown RBP6.46□□□□□ -1.38
DEPDC1B-201ENST00000265036 C1orf140Q5VVS0 124 aa6.46□□□□□ -1.38
DEPDC1B-201ENST00000265036 ALKBH2Q6NS38 261 aa6.46□□□□□ -1.38
DEPDC1B-201ENST00000265036 C10orf53Q8N6V4 93 aa6.46□□□□□ -1.38
DEPDC1B-201ENST00000265036 ZNF559Q9BR84 538 aa6.46□□□□□ -1.38
DEPDC1B-201ENST00000265036 TRIM2Q9C040 744 aa6.46□□□□□ -1.38
DEPDC1B-201ENST00000265036 TIGARQ9NQ88 270 aa6.46□□□□□ -1.38
DEPDC1B-201ENST00000265036 TAS2R1Q9NYW7 299 aa6.46□□□□□ -1.38
DEPDC1B-201ENST00000265036 SELENONQ9NZV5 590 aa6.46□□□□□ -1.38
DEPDC1B-201ENST00000265036 ZNF175Q9Y473 711 aa6.46□□□□□ -1.38
DEPDC1B-201ENST00000265036 CYSRT1A8MQ03 144 aa6.45□□□□□ -1.38
DEPDC1B-201ENST00000265036 A8MVM7 634 aa6.45□□□□□ -1.38
DEPDC1B-201ENST00000265036 PRKD3O94806 890 aa6.45□□□□□ -1.38
DEPDC1B-201ENST00000265036 DLX5P56178 289 aa6.45□□□□□ -1.38
DEPDC1B-201ENST00000265036 SELENOWP63302 87 aa6.45□□□□□ -1.38
DEPDC1B-201ENST00000265036 CSNK2A1P68400 391 aaPredicted RBP6.45□□□□□ -1.38
DEPDC1B-201ENST00000265036 IL1RL1Q01638 556 aa6.45□□□□□ -1.38
DEPDC1B-201ENST00000265036 RASGEF1BQ0VAM2 473 aa6.45□□□□□ -1.38
DEPDC1B-201ENST00000265036 TSC22D1Q15714 1073 aa6.45□□□□□ -1.38
DEPDC1B-201ENST00000265036 OTUD3Q5T2D3 398 aaPredicted RBP6.45□□□□□ -1.38
DEPDC1B-201ENST00000265036 ANKRD34AQ69YU3 496 aa6.45□□□□□ -1.38
DEPDC1B-201ENST00000265036 ULK3Q6PHR2 472 aa6.45□□□□□ -1.38
DEPDC1B-201ENST00000265036 FAM214BQ7L5A3 538 aa6.45□□□□□ -1.38
DEPDC1B-201ENST00000265036 NUFIP2Q7Z417 695 aaKnown RBP6.45□□□□□ -1.38
DEPDC1B-201ENST00000265036 NKAIN4Q8IVV8 208 aa6.45□□□□□ -1.38
DEPDC1B-201ENST00000265036 LSMEM1Q8N8F7 131 aa6.45□□□□□ -1.38
DEPDC1B-201ENST00000265036 BHLHE22Q8NFJ8 381 aaPredicted RBP6.45□□□□□ -1.38
DEPDC1B-201ENST00000265036 PFN4Q8NHR9 129 aa6.45□□□□□ -1.38
DEPDC1B-201ENST00000265036 TMEM255BQ8WV15 326 aa6.45□□□□□ -1.38
DEPDC1B-201ENST00000265036 RASSF5Q8WWW0 418 aa6.45□□□□□ -1.38
DEPDC1B-201ENST00000265036 LZICQ8WZA0 190 aa6.45□□□□□ -1.38
DEPDC1B-201ENST00000265036 TAAR8Q969N4 342 aa6.45□□□□□ -1.38
DEPDC1B-201ENST00000265036 STARD4Q96DR4 205 aa6.45□□□□□ -1.38
DEPDC1B-201ENST00000265036 MOGAT1Q96PD6 335 aa6.45□□□□□ -1.38
DEPDC1B-201ENST00000265036 PSD2Q9BQI7 771 aa6.45□□□□□ -1.38
DEPDC1B-201ENST00000265036 THTPAQ9BU02 230 aa6.45□□□□□ -1.38
DEPDC1B-201ENST00000265036 PTDSS2Q9BVG9 487 aa6.45□□□□□ -1.38
DEPDC1B-201ENST00000265036 SFXN3Q9BWM7 321 aa6.45□□□□□ -1.38
DEPDC1B-201ENST00000265036 AMBRA1Q9C0C7 1298 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms