RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 FAM234AQ9H0X4 552 aa11.24□□□□□ -0.61
SMG6-201ENST00000263073 NOX4Q9NPH5 578 aa11.24□□□□□ -0.61
SMG6-201ENST00000263073 ZNF281Q9Y2X9 895 aa11.24□□□□□ -0.61
SMG6-201ENST00000263073 EFCAB7A8K855 629 aa11.24□□□□□ -0.61
SMG6-201ENST00000263073 NPC1O15118 1278 aa11.24□□□□□ -0.61
SMG6-201ENST00000263073 HOXB9P17482 250 aaPredicted RBP11.24□□□□□ -0.61
SMG6-201ENST00000263073 CRABP1P29762 137 aa11.24□□□□□ -0.61
SMG6-201ENST00000263073 POLR2HP52434 150 aaKnown RBP11.24□□□□□ -0.61
SMG6-201ENST00000263073 SCGB2A2Q13296 93 aa11.24□□□□□ -0.61
SMG6-201ENST00000263073 FAAP20Q6NZ36 180 aa11.24□□□□□ -0.61
SMG6-201ENST00000263073 PAQR6Q6TCH4 344 aa11.24□□□□□ -0.61
SMG6-201ENST00000263073 CNTN4Q8IWV2 1026 aa11.24□□□□□ -0.61
SMG6-201ENST00000263073 SUMF1Q8NBK3 374 aa11.24□□□□□ -0.61
SMG6-201ENST00000263073 OR6F1Q8NGZ6 308 aa11.24□□□□□ -0.61
SMG6-201ENST00000263073 OR56B4Q8NH76 319 aa11.24□□□□□ -0.61
SMG6-201ENST00000263073 ZIC5Q96T25 663 aa11.24□□□□□ -0.61
SMG6-201ENST00000263073 NT5DC2Q9H857 520 aa11.24□□□□□ -0.61
SMG6-201ENST00000263073 DZANK1Q9NVP4 752 aa11.24□□□□□ -0.61
SMG6-201ENST00000263073 HIDE1A8MVS5 230 aa11.24□□□□□ -0.61
SMG6-201ENST00000263073 LGALS8O00214 317 aa11.24□□□□□ -0.61
SMG6-201ENST00000263073 ARHGEF15O94989 841 aa11.24□□□□□ -0.61
SMG6-201ENST00000263073 KCNK5O95279 499 aa11.24□□□□□ -0.61
SMG6-201ENST00000263073 MLF1P58340 268 aa11.24□□□□□ -0.61
SMG6-201ENST00000263073 PLA2G7Q13093 441 aa11.24□□□□□ -0.61
SMG6-201ENST00000263073 LCTLQ6UWM7 567 aa11.24□□□□□ -0.61
SMG6-201ENST00000263073 TMEM184AQ6ZMB5 413 aa11.24□□□□□ -0.61
SMG6-201ENST00000263073 Q6ZSR9 355 aa11.24□□□□□ -0.61
SMG6-201ENST00000263073 MOB3CQ70IA8 216 aa11.24□□□□□ -0.61
SMG6-201ENST00000263073 OR52H1Q8NGJ2 320 aa11.24□□□□□ -0.61
SMG6-201ENST00000263073 ARRDC2Q8TBH0 407 aa11.24□□□□□ -0.61
SMG6-201ENST00000263073 ADAMTS14Q8WXS8 1223 aa11.24□□□□□ -0.61
SMG6-201ENST00000263073 ARPC5LQ9BPX5 153 aa11.24□□□□□ -0.61
SMG6-201ENST00000263073 NICN1Q9BSH3 213 aa11.24□□□□□ -0.61
SMG6-201ENST00000263073 HHLA1C9JL84 531 aa11.23□□□□□ -0.61
SMG6-201ENST00000263073 ZNF593O00488 134 aaPredicted RBP11.23□□□□□ -0.61
SMG6-201ENST00000263073 UGDHO60701 494 aa11.23□□□□□ -0.61
SMG6-201ENST00000263073 ZP2Q05996 745 aa11.23□□□□□ -0.61
SMG6-201ENST00000263073 ESCO2Q56NI9 601 aa11.23□□□□□ -0.61
SMG6-201ENST00000263073 GIMAP5Q96F15 307 aa11.23□□□□□ -0.61
SMG6-201ENST00000263073 AMBRA1Q9C0C7 1298 aa11.23□□□□□ -0.61
SMG6-201ENST00000263073 C1SP09871 688 aa11.23□□□□□ -0.61
SMG6-201ENST00000263073 MMP12P39900 470 aa11.23□□□□□ -0.61
SMG6-201ENST00000263073 SELENOVP59797 346 aa11.23□□□□□ -0.61
SMG6-201ENST00000263073 RAP2BP61225 183 aa11.23□□□□□ -0.61
SMG6-201ENST00000263073 MEF2DQ14814 521 aa11.23□□□□□ -0.61
SMG6-201ENST00000263073 RBMS2Q15434 407 aaKnown RBP11.23□□□□□ -0.61
SMG6-201ENST00000263073 MPP7Q5T2T1 576 aa11.23□□□□□ -0.61
SMG6-201ENST00000263073 FAM122CQ6P4D5 195 aa11.23□□□□□ -0.61
SMG6-201ENST00000263073 LINC00346Q8IVM7 164 aa11.23□□□□□ -0.61
SMG6-201ENST00000263073 SMAP2Q8WU79 429 aaPredicted RBP11.23□□□□□ -0.61
SMG6-201ENST00000263073 TM9SF4Q92544 642 aa11.23□□□□□ -0.61
SMG6-201ENST00000263073 LRIG1Q96JA1 1093 aa11.23□□□□□ -0.61
SMG6-201ENST00000263073 KATNB1Q9BVA0 655 aa11.23□□□□□ -0.61
SMG6-201ENST00000263073 POFUT1Q9H488 388 aa11.23□□□□□ -0.61
SMG6-201ENST00000263073 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.23□□□□□ -0.61
SMG6-201ENST00000263073 PLSCR3Q9NRY6 295 aa11.23□□□□□ -0.61
SMG6-201ENST00000263073 IGKV6D-21A0A0A0MT36 114 aa11.23□□□□□ -0.61
SMG6-201ENST00000263073 DPM1O60762 260 aa11.23□□□□□ -0.61
SMG6-201ENST00000263073 NSA2O95478 260 aaKnown RBP11.23□□□□□ -0.61
SMG6-201ENST00000263073 AIFM1O95831 613 aa11.23□□□□□ -0.61
SMG6-201ENST00000263073 PSMB1P20618 241 aaKnown RBP11.23□□□□□ -0.61
SMG6-201ENST00000263073 POU3F1Q03052 451 aaPredicted RBP11.23□□□□□ -0.61
SMG6-201ENST00000263073 TIGD3Q6B0B8 471 aa11.23□□□□□ -0.61
SMG6-201ENST00000263073 PARS2Q7L3T8 475 aaKnown RBP11.23□□□□□ -0.61
SMG6-201ENST00000263073 MRPL21Q7Z2W9 205 aaKnown RBP11.23□□□□□ -0.61
SMG6-201ENST00000263073 PLPP7Q8NBV4 271 aa11.23□□□□□ -0.61
SMG6-201ENST00000263073 ZNF740Q8NDX6 193 aa11.23□□□□□ -0.61
SMG6-201ENST00000263073 CRYGNQ8WXF5 182 aa11.23□□□□□ -0.61
SMG6-201ENST00000263073 MYADMQ96S97 322 aa11.23□□□□□ -0.61
SMG6-201ENST00000263073 LIN7BQ9HAP6 207 aa11.23□□□□□ -0.61
SMG6-201ENST00000263073 ABRACLQ9P1F3 81 aa11.23□□□□□ -0.61
SMG6-201ENST00000263073 CEBPZOSA8MTT3 80 aa11.23□□□□□ -0.61
SMG6-201ENST00000263073 AKR7A2O43488 359 aa11.23□□□□□ -0.61
SMG6-201ENST00000263073 ONECUT3O60422 494 aaPredicted RBP11.23□□□□□ -0.61
SMG6-201ENST00000263073 EEF1A1P68104 462 aaKnown RBP11.23□□□□□ -0.61
SMG6-201ENST00000263073 MELKQ14680 651 aa11.23□□□□□ -0.61
SMG6-201ENST00000263073 TESK1Q15569 626 aa11.23□□□□□ -0.61
SMG6-201ENST00000263073 SHEQ5VZ18 495 aa11.23□□□□□ -0.61
SMG6-201ENST00000263073 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.23□□□□□ -0.61
SMG6-201ENST00000263073 LACC1Q8IV20 430 aa11.23□□□□□ -0.61
SMG6-201ENST00000263073 OR9A4Q8NGU2 314 aa11.23□□□□□ -0.61
SMG6-201ENST00000263073 MZB1Q8WU39 189 aa11.23□□□□□ -0.61
SMG6-201ENST00000263073 PATZ1Q9HBE1 687 aaKnown RBP11.23□□□□□ -0.61
SMG6-201ENST00000263073 MEGF11A6BM72 1044 aa11.23□□□□□ -0.61
SMG6-201ENST00000263073 GFRA2O00451 464 aa11.23□□□□□ -0.61
SMG6-201ENST00000263073 TMEM64Q6YI46 380 aa11.23□□□□□ -0.61
SMG6-201ENST00000263073 BPHLQ86WA6 291 aaPredicted RBP11.23□□□□□ -0.61
SMG6-201ENST00000263073 LILRA3Q8N6C8 439 aaPredicted RBP11.23□□□□□ -0.61
SMG6-201ENST00000263073 OR13C9Q8NGT0 318 aa11.23□□□□□ -0.61
SMG6-201ENST00000263073 OR14J1Q9UGF5 321 aa11.23□□□□□ -0.61
SMG6-201ENST00000263073 TP53TG5Q9Y2B4 290 aa11.23□□□□□ -0.61
SMG6-201ENST00000263073 ZNF337Q9Y3M9 751 aa11.23□□□□□ -0.61
SMG6-201ENST00000263073 OR2A25A4D2G3 310 aa11.22□□□□□ -0.61
SMG6-201ENST00000263073 ANKRD61A6NGH8 418 aa11.22□□□□□ -0.61
SMG6-201ENST00000263073 SELENOFO60613 162 aa11.22□□□□□ -0.61
SMG6-201ENST00000263073 P04436 131 aa11.22□□□□□ -0.61
SMG6-201ENST00000263073 MSR1P21757 451 aa11.22□□□□□ -0.61
SMG6-201ENST00000263073 GP2P55259 537 aaKnown RBP11.22□□□□□ -0.61
SMG6-201ENST00000263073 NR0B2Q15466 257 aa11.22□□□□□ -0.61
SMG6-201ENST00000263073 RNF151Q2KHN1 245 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms