RNA–Protein interactions for RNA: ENST00000261584.8

PALB2-201, Transcript of partner and localizer of BRCA2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALB2, Length 4,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-201ENST00000261584 PBX2P40425 430 aa9.35□□□□□ -0.91
PALB2-201ENST00000261584 AANATQ16613 207 aa9.35□□□□□ -0.91
PALB2-201ENST00000261584 EIPR1Q53HC9 387 aa9.35□□□□□ -0.91
PALB2-201ENST00000261584 DCST2Q5T1A1 773 aa9.35□□□□□ -0.91
PALB2-201ENST00000261584 DPPA4Q7L190 304 aa9.35□□□□□ -0.91
PALB2-201ENST00000261584 KRT77Q7Z794 578 aa9.35□□□□□ -0.91
PALB2-201ENST00000261584 SHISA5Q8N114 240 aa9.35□□□□□ -0.91
PALB2-201ENST00000261584 SMARCD2Q92925 531 aa9.35□□□□□ -0.91
PALB2-201ENST00000261584 CPEB1Q9BZB8 566 aaKnown RBP9.35□□□□□ -0.91
PALB2-201ENST00000261584 SMIM3Q9BZL3 60 aa9.35□□□□□ -0.91
PALB2-201ENST00000261584 CREBZFQ9NS37 354 aa9.35□□□□□ -0.91
PALB2-201ENST00000261584 PLCL2Q9UPR0 1127 aa9.35□□□□□ -0.91
PALB2-201ENST00000261584 BPTFQ12830 3046 aa9.35□□□□□ -0.91
PALB2-201ENST00000261584 C4orf47A7E2U8 309 aa9.35□□□□□ -0.91
PALB2-201ENST00000261584 DNAJB6O75190 326 aa9.35□□□□□ -0.91
PALB2-201ENST00000261584 ABLIM3O94929 683 aa9.35□□□□□ -0.91
PALB2-201ENST00000261584 HIST1H1CP16403 213 aaKnown RBP9.35□□□□□ -0.91
PALB2-201ENST00000261584 HTR1FP30939 366 aa9.35□□□□□ -0.91
PALB2-201ENST00000261584 P2RY2P41231 377 aa9.35□□□□□ -0.91
PALB2-201ENST00000261584 MAPK14Q16539 360 aa9.35□□□□□ -0.91
PALB2-201ENST00000261584 C12orf73Q69YU5 71 aa9.35□□□□□ -0.91
PALB2-201ENST00000261584 ZNF836Q6ZNA1 936 aa9.35□□□□□ -0.91
PALB2-201ENST00000261584 ZNF620Q6ZNG0 422 aa9.35□□□□□ -0.91
PALB2-201ENST00000261584 OR51S1Q8NGJ8 323 aa9.35□□□□□ -0.91
PALB2-201ENST00000261584 OR6M1Q8NGM8 313 aa9.35□□□□□ -0.91
PALB2-201ENST00000261584 OR9A4Q8NGU2 314 aa9.35□□□□□ -0.91
PALB2-201ENST00000261584 SETD7Q8WTS6 366 aaKnown RBP9.35□□□□□ -0.91
PALB2-201ENST00000261584 HERVK_113Q902F9 699 aa9.35□□□□□ -0.91
PALB2-201ENST00000261584 TMEM106AQ96A25 262 aa9.35□□□□□ -0.91
PALB2-201ENST00000261584 WDR89Q96FK6 387 aaPredicted RBP9.35□□□□□ -0.91
PALB2-201ENST00000261584 SPACA5Q96QH8 159 aa9.35□□□□□ -0.91
PALB2-201ENST00000261584 BCL2L14Q9BZR8 327 aa9.35□□□□□ -0.91
PALB2-201ENST00000261584 A4GALTQ9NPC4 353 aa9.35□□□□□ -0.91
PALB2-201ENST00000261584 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.35□□□□□ -0.91
PALB2-201ENST00000261584 GRHPRQ9UBQ7 328 aa9.35□□□□□ -0.91
PALB2-201ENST00000261584 CGGBP1Q9UFW8 167 aaPredicted RBP9.35□□□□□ -0.91
PALB2-201ENST00000261584 CCDC163A0A0D9SF12 145 aa9.35□□□□□ -0.91
PALB2-201ENST00000261584 TMEM129A0AVI4 362 aa9.35□□□□□ -0.91
PALB2-201ENST00000261584 URADA6NGE7 173 aa9.35□□□□□ -0.91
PALB2-201ENST00000261584 SURF4O15260 269 aa9.35□□□□□ -0.91
PALB2-201ENST00000261584 NFATC1O95644 943 aa9.35□□□□□ -0.91
PALB2-201ENST00000261584 SBK2P0C263 348 aa9.35□□□□□ -0.91
PALB2-201ENST00000261584 ARHGEF6Q15052 776 aa9.35□□□□□ -0.91
PALB2-201ENST00000261584 CDKN3Q16667 212 aa9.35□□□□□ -0.91
PALB2-201ENST00000261584 ZNF628Q5EBL2 1059 aa9.35□□□□□ -0.91
PALB2-201ENST00000261584 SSX6Q7RTT6 188 aa9.35□□□□□ -0.91
PALB2-201ENST00000261584 INO80EQ8NBZ0 244 aaPredicted RBP9.35□□□□□ -0.91
PALB2-201ENST00000261584 OR52R1Q8NGF1 315 aa9.35□□□□□ -0.91
PALB2-201ENST00000261584 FBXW5Q969U6 566 aa9.35□□□□□ -0.91
PALB2-201ENST00000261584 HHIPQ96QV1 700 aa9.35□□□□□ -0.91
PALB2-201ENST00000261584 SLC38A1Q9H2H9 487 aa9.35□□□□□ -0.91
PALB2-201ENST00000261584 SLC25A19Q9HC21 320 aa9.35□□□□□ -0.91
PALB2-201ENST00000261584 FBXO4Q9UKT5 387 aa9.35□□□□□ -0.91
PALB2-201ENST00000261584 CBLCQ9ULV8 474 aa9.35□□□□□ -0.91
PALB2-201ENST00000261584 EDARQ9UNE0 448 aa9.35□□□□□ -0.91
PALB2-201ENST00000261584 WDR81Q562E7 1941 aa9.35□□□□□ -0.91
PALB2-201ENST00000261584 EDDM13A0A1B0GTR0 161 aa9.34□□□□□ -0.91
PALB2-201ENST00000261584 TRIM64BA6NI03 449 aa9.34□□□□□ -0.91
PALB2-201ENST00000261584 S100A9P06702 114 aaKnown RBP9.34□□□□□ -0.91
PALB2-201ENST00000261584 DRD2P14416 443 aa9.34□□□□□ -0.91
PALB2-201ENST00000261584 PI3P19957 117 aa9.34□□□□□ -0.91
PALB2-201ENST00000261584 PRKXP51817 358 aa9.34□□□□□ -0.91
PALB2-201ENST00000261584 LUMP51884 338 aaPredicted RBP9.34□□□□□ -0.91
PALB2-201ENST00000261584 PCBP3P57721 371 aaKnown RBP9.34□□□□□ -0.91
PALB2-201ENST00000261584 MC2RQ01718 297 aa9.34□□□□□ -0.91
PALB2-201ENST00000261584 ARFRP1Q13795 201 aa9.34□□□□□ -0.91
PALB2-201ENST00000261584 OR7A5Q15622 319 aa9.34□□□□□ -0.91
PALB2-201ENST00000261584 LCTLQ6UWM7 567 aa9.34□□□□□ -0.91
PALB2-201ENST00000261584 ZNF546Q86UE3 836 aa9.34□□□□□ -0.91
PALB2-201ENST00000261584 GRAMD2AQ8IUY3 354 aa9.34□□□□□ -0.91
PALB2-201ENST00000261584 GPALPP1Q8IXQ4 340 aa9.34□□□□□ -0.91
PALB2-201ENST00000261584 C9orf62Q8N4C0 152 aa9.34□□□□□ -0.91
PALB2-201ENST00000261584 OR2L5Q8NG80 312 aa9.34□□□□□ -0.91
PALB2-201ENST00000261584 OR10K1Q8NGX5 313 aa9.34□□□□□ -0.91
PALB2-201ENST00000261584 FBLIM1Q8WUP2 373 aa9.34□□□□□ -0.91
PALB2-201ENST00000261584 HSD17B8Q92506 261 aa9.34□□□□□ -0.91
PALB2-201ENST00000261584 TBC1D20Q96BZ9 403 aa9.34□□□□□ -0.91
PALB2-201ENST00000261584 MMABQ96EY8 250 aaPredicted RBP9.34□□□□□ -0.91
PALB2-201ENST00000261584 METTL8Q9H825 291 aaKnown RBP9.34□□□□□ -0.91
PALB2-201ENST00000261584 SLC6A20Q9NP91 592 aa9.34□□□□□ -0.91
PALB2-201ENST00000261584 RXFP3Q9NSD7 469 aa9.34□□□□□ -0.91
PALB2-201ENST00000261584 SIRT3Q9NTG7 399 aaPredicted RBP9.34□□□□□ -0.91
PALB2-201ENST00000261584 FAM86C1Q9NVL1 165 aa9.34□□□□□ -0.91
PALB2-201ENST00000261584 ZSCAN32Q9NX65 697 aa9.34□□□□□ -0.91
PALB2-201ENST00000261584 CKLFQ9UBR5 152 aa9.34□□□□□ -0.91
PALB2-201ENST00000261584 A0A1B0GWA3 101 aa9.34□□□□□ -0.91
PALB2-201ENST00000261584 TSPAN11A1L157 253 aa9.34□□□□□ -0.91
PALB2-201ENST00000261584 CTNSO60931 367 aa9.34□□□□□ -0.91
PALB2-201ENST00000261584 ACSM4P0C7M7 580 aa9.34□□□□□ -0.91
PALB2-201ENST00000261584 MYOGP15173 224 aa9.34□□□□□ -0.91
PALB2-201ENST00000261584 ARFIP1P53367 373 aa9.34□□□□□ -0.91
PALB2-201ENST00000261584 SIRPAP78324 504 aa9.34□□□□□ -0.91
PALB2-201ENST00000261584 LINC00303Q3SY05 128 aa9.34□□□□□ -0.91
PALB2-201ENST00000261584 GLT8D1Q68CQ7 371 aa9.34□□□□□ -0.91
PALB2-201ENST00000261584 C1orf94Q6P1W5 598 aa9.34□□□□□ -0.91
PALB2-201ENST00000261584 TMEM91Q6ZNR0 172 aa9.34□□□□□ -0.91
PALB2-201ENST00000261584 OR2M2Q96R28 347 aa9.34□□□□□ -0.91
PALB2-201ENST00000261584 ADAT1Q9BUB4 502 aaKnown RBP9.34□□□□□ -0.91
PALB2-201ENST00000261584 TRAF4Q9BUZ4 470 aaPredicted RBP9.34□□□□□ -0.91
PALB2-201ENST00000261584 IFT46Q9NQC8 304 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms