RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 ATG4DQ86TL0 474 aaPredicted RBP11.71□□□□□ -0.53
PHGDH-218ENST00000641491 RNF113BQ8IZP6 322 aaKnown RBP11.71□□□□□ -0.53
PHGDH-218ENST00000641491 SVOPLQ8N434 492 aa11.71□□□□□ -0.53
PHGDH-218ENST00000641491 ATG16L2Q8NAA4 619 aa11.71□□□□□ -0.53
PHGDH-218ENST00000641491 CPT1CQ8TCG5 803 aa11.71□□□□□ -0.53
PHGDH-218ENST00000641491 STK35Q8TDR2 534 aa11.71□□□□□ -0.53
PHGDH-218ENST00000641491 FAR1Q8WVX9 515 aa11.71□□□□□ -0.53
PHGDH-218ENST00000641491 ACOT11Q8WXI4 607 aaPredicted RBP11.71□□□□□ -0.53
PHGDH-218ENST00000641491 LRTOMTQ8WZ04 291 aa11.71□□□□□ -0.53
PHGDH-218ENST00000641491 EME1Q96AY2 570 aa11.71□□□□□ -0.53
PHGDH-218ENST00000641491 CENPNQ96H22 339 aaPredicted RBP11.71□□□□□ -0.53
PHGDH-218ENST00000641491 GPR137Q96N19 417 aa11.71□□□□□ -0.53
PHGDH-218ENST00000641491 TMEM43Q9BTV4 400 aa11.71□□□□□ -0.53
PHGDH-218ENST00000641491 SEMA6AQ9H2E6 1030 aa11.71□□□□□ -0.53
PHGDH-218ENST00000641491 ALKBH4Q9NXW9 302 aa11.71□□□□□ -0.53
PHGDH-218ENST00000641491 MCTS1Q9ULC4 181 aaKnown RBP11.71□□□□□ -0.53
PHGDH-218ENST00000641491 HDGFL3Q9Y3E1 203 aa11.71□□□□□ -0.53
PHGDH-218ENST00000641491 PIEZO2Q9H5I5 2752 aa11.71□□□□□ -0.54
PHGDH-218ENST00000641491 MED13Q9UHV7 2174 aa11.71□□□□□ -0.54
PHGDH-218ENST00000641491 DOCK10Q96BY6 2186 aa11.7□□□□□ -0.54
PHGDH-218ENST00000641491 TMEM72A0PK05 275 aa11.7□□□□□ -0.54
PHGDH-218ENST00000641491 OR14I1A6ND48 311 aa11.7□□□□□ -0.54
PHGDH-218ENST00000641491 G3V2T6 193 aa11.7□□□□□ -0.54
PHGDH-218ENST00000641491 SULT2B1O00204 365 aa11.7□□□□□ -0.54
PHGDH-218ENST00000641491 AQP7O14520 342 aa11.7□□□□□ -0.54
PHGDH-218ENST00000641491 ZIC3O60481 467 aa11.7□□□□□ -0.54
PHGDH-218ENST00000641491 CELA3AP09093 270 aa11.7□□□□□ -0.54
PHGDH-218ENST00000641491 CDH2P19022 906 aaPredicted RBP11.7□□□□□ -0.54
PHGDH-218ENST00000641491 EIF1AXP47813 144 aaKnown RBP11.7□□□□□ -0.54
PHGDH-218ENST00000641491 OR2B6P58173 313 aa11.7□□□□□ -0.54
PHGDH-218ENST00000641491 PLAURQ03405 335 aa11.7□□□□□ -0.54
PHGDH-218ENST00000641491 TRIP10Q15642 601 aa11.7□□□□□ -0.54
PHGDH-218ENST00000641491 CMPK2Q5EBM0 449 aa11.7□□□□□ -0.54
PHGDH-218ENST00000641491 C1orf140Q5VVS0 124 aa11.7□□□□□ -0.54
PHGDH-218ENST00000641491 HBMQ6B0K9 141 aa11.7□□□□□ -0.54
PHGDH-218ENST00000641491 ESPNLQ6ZVH7 1005 aa11.7□□□□□ -0.54
PHGDH-218ENST00000641491 MBOAT2Q6ZWT7 520 aa11.7□□□□□ -0.54
PHGDH-218ENST00000641491 P4HA3Q7Z4N8 544 aa11.7□□□□□ -0.54
PHGDH-218ENST00000641491 MCEMP1Q8IX19 187 aa11.7□□□□□ -0.54
PHGDH-218ENST00000641491 PQLC1Q8N2U9 271 aa11.7□□□□□ -0.54
PHGDH-218ENST00000641491 OR10G2Q8NGC3 310 aa11.7□□□□□ -0.54
PHGDH-218ENST00000641491 OR5K1Q8NHB7 308 aa11.7□□□□□ -0.54
PHGDH-218ENST00000641491 GIPC3Q8TF64 312 aa11.7□□□□□ -0.54
PHGDH-218ENST00000641491 TMEM255BQ8WV15 326 aa11.7□□□□□ -0.54
PHGDH-218ENST00000641491 SLC25A36Q96CQ1 311 aa11.7□□□□□ -0.54
PHGDH-218ENST00000641491 SGTBQ96EQ0 304 aa11.7□□□□□ -0.54
PHGDH-218ENST00000641491 TAAR6Q96RI8 345 aa11.7□□□□□ -0.54
PHGDH-218ENST00000641491 WFDC6Q9BQY6 131 aa11.7□□□□□ -0.54
PHGDH-218ENST00000641491 NAA11Q9BSU3 229 aaPredicted RBP11.7□□□□□ -0.54
PHGDH-218ENST00000641491 C9orf16Q9BUW7 83 aa11.7□□□□□ -0.54
PHGDH-218ENST00000641491 TEX12Q9BXU0 123 aa11.7□□□□□ -0.54
PHGDH-218ENST00000641491 ADAM19Q9H013 955 aa11.7□□□□□ -0.54
PHGDH-218ENST00000641491 PDP1Q9P0J1 537 aaPredicted RBP11.7□□□□□ -0.54
PHGDH-218ENST00000641491 ENOPH1Q9UHY7 261 aa11.7□□□□□ -0.54
PHGDH-218ENST00000641491 FIGNL2A6NMB9 653 aa11.69□□□□□ -0.54
PHGDH-218ENST00000641491 TMEM229AB2RXF0 380 aa11.69□□□□□ -0.54
PHGDH-218ENST00000641491 NPIPA2E9PIF3 369 aa11.69□□□□□ -0.54
PHGDH-218ENST00000641491 NPIPA3F8WFD2 350 aa11.69□□□□□ -0.54
PHGDH-218ENST00000641491 ETV2O00321 342 aaPredicted RBP11.69□□□□□ -0.54
PHGDH-218ENST00000641491 PRRG2O14669 202 aa11.69□□□□□ -0.54
PHGDH-218ENST00000641491 ADAM11O75078 769 aa11.69□□□□□ -0.54
PHGDH-218ENST00000641491 TPOP07202 933 aa11.69□□□□□ -0.54
PHGDH-218ENST00000641491 IFI30P13284 250 aa11.69□□□□□ -0.54
PHGDH-218ENST00000641491 ANPEPP15144 967 aa11.69□□□□□ -0.54
PHGDH-218ENST00000641491 PTNP21246 168 aa11.69□□□□□ -0.54
PHGDH-218ENST00000641491 PTGS2P35354 604 aa11.69□□□□□ -0.54
PHGDH-218ENST00000641491 RPS5P46782 204 aaKnown RBP11.69□□□□□ -0.54
PHGDH-218ENST00000641491 SLC35A1P78382 337 aa11.69□□□□□ -0.54
PHGDH-218ENST00000641491 MICAQ29983 383 aa11.69□□□□□ -0.54
PHGDH-218ENST00000641491 FAM69AQ5T7M9 428 aa11.69□□□□□ -0.54
PHGDH-218ENST00000641491 PODNL1Q6PEZ8 512 aa11.69□□□□□ -0.54
PHGDH-218ENST00000641491 MAMDC2Q7Z304 686 aaPredicted RBP11.69□□□□□ -0.54
PHGDH-218ENST00000641491 PRICKLE2Q7Z3G6 844 aa11.69□□□□□ -0.54
PHGDH-218ENST00000641491 NANOGNBQ7Z5D8 188 aa11.69□□□□□ -0.54
PHGDH-218ENST00000641491 AMIGO2Q86SJ2 522 aa11.69□□□□□ -0.54
PHGDH-218ENST00000641491 NKAIN4Q8IVV8 208 aa11.69□□□□□ -0.54
PHGDH-218ENST00000641491 NRMQ8IXM6 262 aa11.69□□□□□ -0.54
PHGDH-218ENST00000641491 OR4K5Q8NGD3 323 aa11.69□□□□□ -0.54
PHGDH-218ENST00000641491 OR2V1Q8NHB1 315 aa11.69□□□□□ -0.54
PHGDH-218ENST00000641491 RELTQ969Z4 430 aa11.69□□□□□ -0.54
PHGDH-218ENST00000641491 SLCO4A1Q96BD0 722 aa11.69□□□□□ -0.54
PHGDH-218ENST00000641491 SNRNP40Q96DI7 357 aaKnown RBP11.69□□□□□ -0.54
PHGDH-218ENST00000641491 POTEKPQ9BYX7 375 aa11.69□□□□□ -0.54
PHGDH-218ENST00000641491 NANSQ9NR45 359 aa11.69□□□□□ -0.54
PHGDH-218ENST00000641491 ZNF337Q9Y3M9 751 aa11.69□□□□□ -0.54
PHGDH-218ENST00000641491 LYVE1Q9Y5Y7 322 aa11.69□□□□□ -0.54
PHGDH-218ENST00000641491 DOPEY2Q9Y3R5 2298 aa11.69□□□□□ -0.54
PHGDH-218ENST00000641491 EXPH5Q8NEV8 1989 aa11.68□□□□□ -0.54
PHGDH-218ENST00000641491 USP9XQ93008 2570 aaPredicted RBP11.68□□□□□ -0.54
PHGDH-218ENST00000641491 A0A1B0GTH9 108 aa11.68□□□□□ -0.54
PHGDH-218ENST00000641491 SAC3D1A6NKF1 404 aa11.68□□□□□ -0.54
PHGDH-218ENST00000641491 ENO4A6NNW6 628 aa11.68□□□□□ -0.54
PHGDH-218ENST00000641491 EFCAB9A8MZ26 197 aa11.68□□□□□ -0.54
PHGDH-218ENST00000641491 ADAM10O14672 748 aa11.68□□□□□ -0.54
PHGDH-218ENST00000641491 TNFSF11O14788 317 aa11.68□□□□□ -0.54
PHGDH-218ENST00000641491 EIF1BO60739 113 aaKnown RBP11.68□□□□□ -0.54
PHGDH-218ENST00000641491 MT-ATP6P00846 226 aa11.68□□□□□ -0.54
PHGDH-218ENST00000641491 IGHG3P01860 377 aa11.68□□□□□ -0.54
PHGDH-218ENST00000641491 OPN1LWP04000 364 aa11.68□□□□□ -0.54
PHGDH-218ENST00000641491 FCGR2AP12318 317 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms