RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 CADM2Q8N3J6 435 aa13.84□□□□□ -0.19
TRIM3-215ENST00000639856 TMEM99Q8N816 258 aa13.84□□□□□ -0.19
TRIM3-215ENST00000639856 BCORP1Q8N888 145 aa13.84□□□□□ -0.19
TRIM3-215ENST00000639856 OR4C3Q8NH37 302 aa13.84□□□□□ -0.19
TRIM3-215ENST00000639856 DNAJA4Q8WW22 397 aaPredicted RBP13.84□□□□□ -0.19
TRIM3-215ENST00000639856 NAT6Q93015 286 aa13.84□□□□□ -0.19
TRIM3-215ENST00000639856 SENP5Q96HI0 755 aaPredicted RBP13.84□□□□□ -0.19
TRIM3-215ENST00000639856 LMF1Q96S06 567 aa13.84□□□□□ -0.19
TRIM3-215ENST00000639856 DCLRE1CQ96SD1 692 aaKnown RBP13.84□□□□□ -0.19
TRIM3-215ENST00000639856 TIMP4Q99727 224 aa13.84□□□□□ -0.19
TRIM3-215ENST00000639856 PELOQ9BRX2 385 aaKnown RBP13.84□□□□□ -0.19
TRIM3-215ENST00000639856 HDHD5Q9BXW7 423 aa13.84□□□□□ -0.19
TRIM3-215ENST00000639856 SRRQ9GZT4 340 aa13.84□□□□□ -0.19
TRIM3-215ENST00000639856 SLC22A11Q9NSA0 550 aa13.84□□□□□ -0.19
TRIM3-215ENST00000639856 RPS6KB2Q9UBS0 482 aa13.84□□□□□ -0.19
TRIM3-215ENST00000639856 CCDC182A6NF36 153 aa13.83□□□□□ -0.2
TRIM3-215ENST00000639856 EFCAB7A8K855 629 aa13.83□□□□□ -0.2
TRIM3-215ENST00000639856 CASKO14936 926 aa13.83□□□□□ -0.2
TRIM3-215ENST00000639856 CSTAP01040 98 aa13.83□□□□□ -0.2
TRIM3-215ENST00000639856 ZNF3P17036 446 aa13.83□□□□□ -0.2
TRIM3-215ENST00000639856 HK1P19367 917 aa13.83□□□□□ -0.2
TRIM3-215ENST00000639856 NOS3P29474 1203 aa13.83□□□□□ -0.2
TRIM3-215ENST00000639856 SLC6A6P31641 620 aa13.83□□□□□ -0.2
TRIM3-215ENST00000639856 DAB2P98082 770 aa13.83□□□□□ -0.2
TRIM3-215ENST00000639856 GALEQ14376 348 aa13.83□□□□□ -0.2
TRIM3-215ENST00000639856 DESI1Q6ICB0 168 aa13.83□□□□□ -0.2
TRIM3-215ENST00000639856 CCBE1Q6UXH8 406 aaPredicted RBP13.83□□□□□ -0.2
TRIM3-215ENST00000639856 SHISA6Q6ZSJ9 500 aa13.83□□□□□ -0.2
TRIM3-215ENST00000639856 TMCO6Q96DC7 493 aa13.83□□□□□ -0.2
TRIM3-215ENST00000639856 OR8D2Q9GZM6 311 aa13.83□□□□□ -0.2
TRIM3-215ENST00000639856 OR51V1Q9H2C8 321 aa13.83□□□□□ -0.2
TRIM3-215ENST00000639856 MCCC2Q9HCC0 563 aa13.83□□□□□ -0.2
TRIM3-215ENST00000639856 INPP5EQ9NRR6 644 aa13.83□□□□□ -0.2
TRIM3-215ENST00000639856 BABAM2Q9NXR7 383 aa13.83□□□□□ -0.2
TRIM3-215ENST00000639856 POLHQ9Y253 713 aa13.83□□□□□ -0.2
TRIM3-215ENST00000639856 DAPL1A0PJW8 107 aa13.82□□□□□ -0.2
TRIM3-215ENST00000639856 SMIM30A4D0T7 59 aa13.82□□□□□ -0.2
TRIM3-215ENST00000639856 SERINC4A6NH21 518 aa13.82□□□□□ -0.2
TRIM3-215ENST00000639856 REM1O75628 298 aa13.82□□□□□ -0.2
TRIM3-215ENST00000639856 SLC2A5P22732 501 aa13.82□□□□□ -0.2
TRIM3-215ENST00000639856 GPR143P51810 404 aa13.82□□□□□ -0.2
TRIM3-215ENST00000639856 SLC16A1P53985 500 aa13.82□□□□□ -0.2
TRIM3-215ENST00000639856 RPS7P62081 194 aaKnown RBP13.82□□□□□ -0.2
TRIM3-215ENST00000639856 BIKQ13323 160 aa13.82□□□□□ -0.2
TRIM3-215ENST00000639856 CRMP1Q14194 572 aa13.82□□□□□ -0.2
TRIM3-215ENST00000639856 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.82□□□□□ -0.2
TRIM3-215ENST00000639856 GLYR1Q49A26 553 aaPredicted RBP13.82□□□□□ -0.2
TRIM3-215ENST00000639856 FCRLBQ6BAA4 426 aa13.82□□□□□ -0.2
TRIM3-215ENST00000639856 ARHGAP11AQ6P4F7 1023 aa13.82□□□□□ -0.2
TRIM3-215ENST00000639856 MED25Q71SY5 747 aa13.82□□□□□ -0.2
TRIM3-215ENST00000639856 COX15Q7KZN9 410 aa13.82□□□□□ -0.2
TRIM3-215ENST00000639856 MARCH9Q86YJ5 346 aa13.82□□□□□ -0.2
TRIM3-215ENST00000639856 ZSCAN1Q8NBB4 408 aa13.82□□□□□ -0.2
TRIM3-215ENST00000639856 ZBTB44Q8NCP5 570 aa13.82□□□□□ -0.2
TRIM3-215ENST00000639856 NEIL3Q8TAT5 605 aa13.82□□□□□ -0.2
TRIM3-215ENST00000639856 SETD6Q8TBK2 473 aa13.82□□□□□ -0.2
TRIM3-215ENST00000639856 TBX5Q99593 518 aa13.82□□□□□ -0.2
TRIM3-215ENST00000639856 VN1R1Q9GZP7 353 aa13.82□□□□□ -0.2
TRIM3-215ENST00000639856 PRODH2Q9UF12 536 aa13.82□□□□□ -0.2
TRIM3-215ENST00000639856 TBC1D24Q9ULP9 559 aa13.82□□□□□ -0.2
TRIM3-215ENST00000639856 SBK2P0C263 348 aa13.82□□□□□ -0.2
TRIM3-215ENST00000639856 CLUP10909 449 aa13.82□□□□□ -0.2
TRIM3-215ENST00000639856 SLC37A1P57057 533 aa13.82□□□□□ -0.2
TRIM3-215ENST00000639856 ACY1Q03154 408 aa13.82□□□□□ -0.2
TRIM3-215ENST00000639856 DBPQ10586 325 aaPredicted RBP13.82□□□□□ -0.2
TRIM3-215ENST00000639856 NSDHLQ15738 373 aa13.82□□□□□ -0.2
TRIM3-215ENST00000639856 NDUFAF6Q330K2 333 aa13.82□□□□□ -0.2
TRIM3-215ENST00000639856 PWWP2BQ6NUJ5 590 aa13.82□□□□□ -0.2
TRIM3-215ENST00000639856 OR10H4Q8NGA5 316 aa13.82□□□□□ -0.2
TRIM3-215ENST00000639856 SLC7A5P2Q9GIP4 190 aa13.82□□□□□ -0.2
TRIM3-215ENST00000639856 MKKSQ9NPJ1 570 aaPredicted RBP13.82□□□□□ -0.2
TRIM3-215ENST00000639856 MKL2Q9ULH7 1088 aa13.82□□□□□ -0.2
TRIM3-215ENST00000639856 A0A087WUJ7 227 aa13.81□□□□□ -0.2
TRIM3-215ENST00000639856 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.81□□□□□ -0.2
TRIM3-215ENST00000639856 TCRBV16S1A1N1A0A5B0 115 aa13.81□□□□□ -0.2
TRIM3-215ENST00000639856 RNF13O43567 381 aa13.81□□□□□ -0.2
TRIM3-215ENST00000639856 GDF9O60383 454 aa13.81□□□□□ -0.2
TRIM3-215ENST00000639856 DDAH2O95865 285 aa13.81□□□□□ -0.2
TRIM3-215ENST00000639856 CAV3P56539 151 aa13.81□□□□□ -0.2
TRIM3-215ENST00000639856 INSL4Q14641 139 aa13.81□□□□□ -0.2
TRIM3-215ENST00000639856 BAK1Q16611 211 aa13.81□□□□□ -0.2
TRIM3-215ENST00000639856 PHF19Q5T6S3 580 aa13.81□□□□□ -0.2
TRIM3-215ENST00000639856 YOD1Q5VVQ6 348 aaPredicted RBP13.81□□□□□ -0.2
TRIM3-215ENST00000639856 RHBDD2Q6NTF9 364 aa13.81□□□□□ -0.2
TRIM3-215ENST00000639856 FAM131AQ6UXB0 335 aa13.81□□□□□ -0.2
TRIM3-215ENST00000639856 TMEM91Q6ZNR0 172 aa13.81□□□□□ -0.2
TRIM3-215ENST00000639856 RABEPKQ7Z6M1 372 aa13.81□□□□□ -0.2
TRIM3-215ENST00000639856 CYB561A3Q8NBI2 242 aa13.81□□□□□ -0.2
TRIM3-215ENST00000639856 SLC2A12Q8TD20 617 aa13.81□□□□□ -0.2
TRIM3-215ENST00000639856 ATOH1Q92858 354 aaPredicted RBP13.81□□□□□ -0.2
TRIM3-215ENST00000639856 HPS1Q92902 700 aa13.81□□□□□ -0.2
TRIM3-215ENST00000639856 DIRAS2Q96HU8 199 aa13.81□□□□□ -0.2
TRIM3-215ENST00000639856 APMAPQ9HDC9 416 aa13.81□□□□□ -0.2
TRIM3-215ENST00000639856 HAO2Q9NYQ3 351 aa13.81□□□□□ -0.2
TRIM3-215ENST00000639856 CLCA3PQ9Y6N3 262 aa13.81□□□□□ -0.2
TRIM3-215ENST00000639856 FABP12A6NFH5 140 aa13.81□□□□□ -0.2
TRIM3-215ENST00000639856 CD8B2A6NJW9 211 aa13.81□□□□□ -0.2
TRIM3-215ENST00000639856 GNB5O14775 395 aa13.81□□□□□ -0.2
TRIM3-215ENST00000639856 SNPHO15079 494 aa13.81□□□□□ -0.2
TRIM3-215ENST00000639856 IFNGP01579 166 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms