RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 TIGARQ9NQ88 270 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 IFT46Q9NQC8 304 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 SLC2A9Q9NRM0 540 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 CUTCQ9NTM9 273 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 ACSS1Q9NUB1 689 aaPredicted RBP2.72□□□□□ -1.97
VIM-210ENST00000637053 ASB6Q9NWX5 421 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 COA4Q9NYJ1 87 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 MAT2BQ9NZL9 334 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 FLRT1Q9NZU1 646 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 SLC17A6Q9P2U8 582 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 STEAP1Q9UHE8 339 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 RWDD2AQ9UIY3 292 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 KCNG2Q9UJ96 466 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 OR52A1Q9UKL2 312 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 PACSIN3Q9UKS6 424 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 ZNF490Q9ULM2 529 aaPredicted RBP2.72□□□□□ -1.97
VIM-210ENST00000637053 PRPF19Q9UMS4 504 aaKnown RBP2.72□□□□□ -1.97
VIM-210ENST00000637053 GOLT1BQ9Y3E0 138 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 ASB4Q9Y574 426 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 ARL5AQ9Y689 179 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 STYXL1Q9Y6J8 313 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 KDM5BQ9UGL1 1544 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 CEMIPQ8WUJ3 1361 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 CLUHO75153 1309 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 ATXN2Q99700 1313 aaKnown RBP2.71□□□□□ -1.98
VIM-210ENST00000637053 NPIPA5A0A0B4J1W7 369 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 hCG_38984A0A1B0GV85 526 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 A0A1B0GVI7 797 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP2.71□□□□□ -1.98
VIM-210ENST00000637053 A0A1W2PPC1 479 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 A0A1W2PPK0 400 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 A0A1W2PRD5 423 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 GRID2IPA4D2P6 1211 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 LRRC30A6NM36 301 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 ZAR1LA6NP61 321 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 CENPXA8MT69 81 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 M0R3G1 203 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 PSMD12O00232 456 aaPredicted RBP2.71□□□□□ -1.98
VIM-210ENST00000637053 ADAM10O14672 748 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 PRMT5O14744 637 aaPredicted RBP2.71□□□□□ -1.98
VIM-210ENST00000637053 PPP1R2P9O14990 202 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 CHST1O43916 411 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 PRKYO43930 277 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 SRPX2O60687 465 aaPredicted RBP2.71□□□□□ -1.98
VIM-210ENST00000637053 HSBP1O75506 76 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 AQP8O94778 261 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 GLSO94925 669 aaPredicted RBP2.71□□□□□ -1.98
VIM-210ENST00000637053 NDUFA7O95182 113 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 ANP32DO95626 131 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 CYB5R3P00387 301 aaPredicted RBP2.71□□□□□ -1.98
VIM-210ENST00000637053 NR3C1P04150 777 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 ATP1A1P05023 1023 aaKnown RBP2.71□□□□□ -1.98
VIM-210ENST00000637053 PCCAP05165 728 aaPredicted RBP2.71□□□□□ -1.98
VIM-210ENST00000637053 KLK3P07288 261 aaPredicted RBP2.71□□□□□ -1.98
VIM-210ENST00000637053 RBP1P09455 135 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 FAM228BP0C875 321 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 SP9P0CG40 484 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 MYL2P10916 166 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 SCGB1A1P11684 91 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 GP9P14770 177 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 MYOGP15173 224 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 GYPEP15421 78 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 EPCAMP16422 314 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 EFNA1P20827 205 aaPredicted RBP2.71□□□□□ -1.98
VIM-210ENST00000637053 FCARP24071 287 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 ADORA2AP29274 412 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 PHBP35232 272 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 SSTR5P35346 364 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 ARR3P36575 388 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 CSKP41240 450 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 GYG1P46976 350 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 CSNK1A1P48729 337 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 MTHFSP49914 203 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 IDH3GP51553 393 aaPredicted RBP2.71□□□□□ -1.98
VIM-210ENST00000637053 RABGGTBP53611 331 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 CRYBA4P53673 196 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 KCNK10P57789 538 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 OR4D2P58180 307 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 RANP62826 216 aaKnown RBP2.71□□□□□ -1.98
VIM-210ENST00000637053 CXADRP78310 365 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 MRPS11P82912 194 aaKnown RBP2.71□□□□□ -1.98
VIM-210ENST00000637053 RPL19P84098 196 aaKnown RBP2.71□□□□□ -1.98
VIM-210ENST00000637053 DEFA6Q01524 100 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 OGDHQ02218 1023 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 HHEXQ03014 270 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 MBTD1Q05BQ5 628 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 CRYZQ08257 329 aaKnown RBP2.71□□□□□ -1.98
VIM-210ENST00000637053 SELENBP1Q13228 472 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 MELKQ14680 651 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 MESDQ14696 234 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 PHKG1Q16816 387 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 ZSWIM7Q19AV6 140 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 TCTN1Q2MV58 587 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 HLA-BQ31612 363 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 RFX4Q33E94 735 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 TMEM176BQ3YBM2 270 aaPredicted RBP2.71□□□□□ -1.98
VIM-210ENST00000637053 VPS26BQ4G0F5 336 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 ACSM3Q53FZ2 586 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 SDHAF4Q5VUM1 108 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 KCTD16Q68DU8 428 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms