RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 PDSS1Q5T2R2 415 aa14.38□□□□□ -0.11
CLN6-216ENST00000636876 ZNF585AQ6P3V2 769 aa14.38□□□□□ -0.11
CLN6-216ENST00000636876 LINC00114Q6XXX2 140 aa14.38□□□□□ -0.11
CLN6-216ENST00000636876 ZDHHC21Q8IVQ6 265 aa14.38□□□□□ -0.11
CLN6-216ENST00000636876 OFCC1Q8IZS5 231 aa14.38□□□□□ -0.11
CLN6-216ENST00000636876 ZPLD1Q8TCW7 415 aa14.38□□□□□ -0.11
CLN6-216ENST00000636876 STK35Q8TDR2 534 aa14.38□□□□□ -0.11
CLN6-216ENST00000636876 RELTQ969Z4 430 aa14.38□□□□□ -0.11
CLN6-216ENST00000636876 DDIT4LQ96D03 193 aa14.38□□□□□ -0.11
CLN6-216ENST00000636876 MPP4Q96JB8 637 aa14.38□□□□□ -0.11
CLN6-216ENST00000636876 RAB3IPQ96QF0 476 aaPredicted RBP14.38□□□□□ -0.11
CLN6-216ENST00000636876 OR5B2Q96R09 309 aa14.38□□□□□ -0.11
CLN6-216ENST00000636876 TP63Q9H3D4 680 aaPredicted RBP14.38□□□□□ -0.11
CLN6-216ENST00000636876 COQ10BQ9H8M1 238 aa14.38□□□□□ -0.11
CLN6-216ENST00000636876 ALKBH4Q9NXW9 302 aa14.38□□□□□ -0.11
CLN6-216ENST00000636876 TINAGQ9UJW2 476 aa14.38□□□□□ -0.11
CLN6-216ENST00000636876 HDGFL3Q9Y3E1 203 aa14.38□□□□□ -0.11
CLN6-216ENST00000636876 FAM32AQ9Y421 112 aaKnown RBP14.38□□□□□ -0.11
CLN6-216ENST00000636876 HIVEP3Q5T1R4 2406 aa14.38□□□□□ -0.11
CLN6-216ENST00000636876 IGKV1D-42A0A075B6H8 117 aa14.37□□□□□ -0.11
CLN6-216ENST00000636876 TRGV8A0A0C4DH27 118 aa14.37□□□□□ -0.11
CLN6-216ENST00000636876 A0A1W2PNR3 127 aa14.37□□□□□ -0.11
CLN6-216ENST00000636876 DHRS12A0PJE2 317 aa14.37□□□□□ -0.11
CLN6-216ENST00000636876 ZC3H12DA2A288 527 aaKnown RBP14.37□□□□□ -0.11
CLN6-216ENST00000636876 NPIPB7O75200 414 aa14.37□□□□□ -0.11
CLN6-216ENST00000636876 GPIP06744 558 aa14.37□□□□□ -0.11
CLN6-216ENST00000636876 HOXD4P09016 255 aaPredicted RBP14.37□□□□□ -0.11
CLN6-216ENST00000636876 UMPSP11172 480 aa14.37□□□□□ -0.11
CLN6-216ENST00000636876 NQO1P15559 274 aaKnown RBP14.37□□□□□ -0.11
CLN6-216ENST00000636876 ACVR2AP27037 513 aa14.37□□□□□ -0.11
CLN6-216ENST00000636876 PTGER4P35408 488 aa14.37□□□□□ -0.11
CLN6-216ENST00000636876 CA7P43166 264 aa14.37□□□□□ -0.11
CLN6-216ENST00000636876 MAGEA2P43356 314 aa14.37□□□□□ -0.11
CLN6-216ENST00000636876 RPS3AP61247 264 aaKnown RBP14.37□□□□□ -0.11
CLN6-216ENST00000636876 ST3GAL3Q11203 375 aa14.37□□□□□ -0.11
CLN6-216ENST00000636876 ACSF3Q4G176 576 aaPredicted RBP14.37□□□□□ -0.11
CLN6-216ENST00000636876 HBMQ6B0K9 141 aa14.37□□□□□ -0.11
CLN6-216ENST00000636876 WDR88Q6ZMY6 472 aa14.37□□□□□ -0.11
CLN6-216ENST00000636876 PIWIL3Q7Z3Z3 882 aaKnown RBP14.37□□□□□ -0.11
CLN6-216ENST00000636876 OR10D3Q8NH80 312 aa14.37□□□□□ -0.11
CLN6-216ENST00000636876 CANT1Q8WVQ1 401 aa14.37□□□□□ -0.11
CLN6-216ENST00000636876 ARL5BQ96KC2 179 aa14.37□□□□□ -0.11
CLN6-216ENST00000636876 PRSS27Q9BQR3 290 aa14.37□□□□□ -0.11
CLN6-216ENST00000636876 TMEM43Q9BTV4 400 aa14.37□□□□□ -0.11
CLN6-216ENST00000636876 FNDC11Q9BVV2 318 aa14.37□□□□□ -0.11
CLN6-216ENST00000636876 POTEKPQ9BYX7 375 aa14.37□□□□□ -0.11
CLN6-216ENST00000636876 CXCL13O43927 109 aa14.36□□□□□ -0.11
CLN6-216ENST00000636876 DIRAS1O95057 198 aa14.36□□□□□ -0.11
CLN6-216ENST00000636876 RAP2AP10114 183 aa14.36□□□□□ -0.11
CLN6-216ENST00000636876 HOXB6P17509 224 aaKnown RBP14.36□□□□□ -0.11
CLN6-216ENST00000636876 EIF1AXP47813 144 aaKnown RBP14.36□□□□□ -0.11
CLN6-216ENST00000636876 ERFP50548 548 aa14.36□□□□□ -0.11
CLN6-216ENST00000636876 CARD18P57730 90 aa14.36□□□□□ -0.11
CLN6-216ENST00000636876 EGR4Q05215 589 aa14.36□□□□□ -0.11
CLN6-216ENST00000636876 MYBPHQ13203 477 aa14.36□□□□□ -0.11
CLN6-216ENST00000636876 CCNIQ14094 377 aa14.36□□□□□ -0.11
CLN6-216ENST00000636876 SF3B4Q15427 424 aaKnown RBP eCLIP14.36□□□□□ -0.11
CLN6-216ENST00000636876 EIF2S3LQ2VIR3 472 aaKnown RBP14.36□□□□□ -0.11
CLN6-216ENST00000636876 C1orf185Q5T7R7 199 aa14.36□□□□□ -0.11
CLN6-216ENST00000636876 C1orf140Q5VVS0 124 aa14.36□□□□□ -0.11
CLN6-216ENST00000636876 C1QL3Q5VWW1 255 aa14.36□□□□□ -0.11
CLN6-216ENST00000636876 C5orf46Q6UWT4 87 aa14.36□□□□□ -0.11
CLN6-216ENST00000636876 C3P1Q6ZMU1 363 aa14.36□□□□□ -0.11
CLN6-216ENST00000636876 TMPPEQ6ZT21 453 aa14.36□□□□□ -0.11
CLN6-216ENST00000636876 CHMP1BQ7LBR1 199 aa14.36□□□□□ -0.11
CLN6-216ENST00000636876 ADGRE4PQ86SQ3 457 aa14.36□□□□□ -0.11
CLN6-216ENST00000636876 NKAIN4Q8IVV8 208 aa14.36□□□□□ -0.11
CLN6-216ENST00000636876 PIK3C3Q8NEB9 887 aa14.36□□□□□ -0.11
CLN6-216ENST00000636876 OSTF1Q92882 214 aa14.36□□□□□ -0.11
CLN6-216ENST00000636876 RSRC1Q96IZ7 334 aaKnown RBP14.36□□□□□ -0.11
CLN6-216ENST00000636876 PIP5K1AQ99755 562 aa14.36□□□□□ -0.11
CLN6-216ENST00000636876 ZNF426Q9BUY5 554 aa14.36□□□□□ -0.11
CLN6-216ENST00000636876 MAN2C1Q9NTJ4 1040 aa14.36□□□□□ -0.11
CLN6-216ENST00000636876 PAQR5Q9NXK6 330 aaPredicted RBP14.36□□□□□ -0.11
CLN6-216ENST00000636876 RHCGQ9UBD6 479 aa14.36□□□□□ -0.11
CLN6-216ENST00000636876 SH3BGRL2Q9UJC5 107 aa14.36□□□□□ -0.11
CLN6-216ENST00000636876 AURKCQ9UQB9 309 aa14.36□□□□□ -0.11
CLN6-216ENST00000636876 FAM215AQ9Y5M1 114 aa14.36□□□□□ -0.11
CLN6-216ENST00000636876 CLCA1A8K7I4 914 aa14.35□□□□□ -0.11
CLN6-216ENST00000636876 AHSA1O95433 338 aa14.35□□□□□ -0.11
CLN6-216ENST00000636876 PMS2P2O95744 297 aa14.35□□□□□ -0.11
CLN6-216ENST00000636876 MT-ND1P03886 318 aa14.35□□□□□ -0.11
CLN6-216ENST00000636876 H1F0P07305 194 aaKnown RBP14.35□□□□□ -0.11
CLN6-216ENST00000636876 FUT4P22083 530 aa14.35□□□□□ -0.11
CLN6-216ENST00000636876 IDUAP35475 653 aa14.35□□□□□ -0.11
CLN6-216ENST00000636876 RBM34P42696 430 aaKnown RBP14.35□□□□□ -0.11
CLN6-216ENST00000636876 DIO1P49895 249 aa14.35□□□□□ -0.11
CLN6-216ENST00000636876 TRAM2Q15035 370 aa14.35□□□□□ -0.11
CLN6-216ENST00000636876 NSUN5P2Q63ZY6 315 aa14.35□□□□□ -0.11
CLN6-216ENST00000636876 RTL6Q6ICC9 239 aa14.35□□□□□ -0.11
CLN6-216ENST00000636876 TTC33Q6PID6 262 aaPredicted RBP14.35□□□□□ -0.11
CLN6-216ENST00000636876 P3H2Q8IVL5 708 aa14.35□□□□□ -0.11
CLN6-216ENST00000636876 PRR7Q8TB68 274 aa14.35□□□□□ -0.11
CLN6-216ENST00000636876 ZNF845Q96IR2 970 aaPredicted RBP14.35□□□□□ -0.11
CLN6-216ENST00000636876 DHRS1Q96LJ7 313 aa14.35□□□□□ -0.11
CLN6-216ENST00000636876 UCN2Q96RP3 112 aa14.35□□□□□ -0.11
CLN6-216ENST00000636876 TRIB1Q96RU8 372 aa14.35□□□□□ -0.11
CLN6-216ENST00000636876 ZNF347Q96SE7 839 aa14.35□□□□□ -0.11
CLN6-216ENST00000636876 SRXN1Q9BYN0 137 aa14.35□□□□□ -0.11
CLN6-216ENST00000636876 ANKRD19PQ9H560 264 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms