RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 TMA7Q9Y2S6 64 aaKnown RBP14.25□□□□□ -0.13
CLN8-209ENST00000635970 A0A0X1KG70 313 aa14.25□□□□□ -0.13
CLN8-209ENST00000635970 A0A1W2PQ72 361 aa14.25□□□□□ -0.13
CLN8-209ENST00000635970 B8ZZF3 427 aa14.25□□□□□ -0.13
CLN8-209ENST00000635970 TERTO14746 1132 aaKnown RBP14.25□□□□□ -0.13
CLN8-209ENST00000635970 SLC28A2O43868 658 aa14.25□□□□□ -0.13
CLN8-209ENST00000635970 ZNF888P0CJ79 500 aaPredicted RBP14.25□□□□□ -0.13
CLN8-209ENST00000635970 LIMS3P0CW19 117 aa14.25□□□□□ -0.13
CLN8-209ENST00000635970 LIMS4P0CW20 117 aa14.25□□□□□ -0.13
CLN8-209ENST00000635970 SSTR4P31391 388 aa14.25□□□□□ -0.13
CLN8-209ENST00000635970 DCDP81605 110 aaKnown RBP14.25□□□□□ -0.13
CLN8-209ENST00000635970 RGS1Q08116 209 aa14.25□□□□□ -0.13
CLN8-209ENST00000635970 PIN1Q13526 163 aaPredicted RBP14.25□□□□□ -0.13
CLN8-209ENST00000635970 ST3GAL2Q16842 350 aa14.25□□□□□ -0.13
CLN8-209ENST00000635970 NKAIN1Q4KMZ8 207 aa14.25□□□□□ -0.13
CLN8-209ENST00000635970 HSD17B12Q53GQ0 312 aa14.25□□□□□ -0.13
CLN8-209ENST00000635970 OR2G6Q5TZ20 316 aa14.25□□□□□ -0.13
CLN8-209ENST00000635970 GARNL3Q5VVW2 1013 aa14.25□□□□□ -0.13
CLN8-209ENST00000635970 LAMTOR1Q6IAA8 161 aa14.25□□□□□ -0.13
CLN8-209ENST00000635970 COX15Q7KZN9 410 aa14.25□□□□□ -0.13
CLN8-209ENST00000635970 OR4D11Q8NGI4 311 aa14.25□□□□□ -0.13
CLN8-209ENST00000635970 TM4SF18Q96CE8 201 aa14.25□□□□□ -0.13
CLN8-209ENST00000635970 MMABQ96EY8 250 aaPredicted RBP14.25□□□□□ -0.13
CLN8-209ENST00000635970 DCLRE1CQ96SD1 692 aaKnown RBP14.25□□□□□ -0.13
CLN8-209ENST00000635970 TM9SF2Q99805 663 aa14.25□□□□□ -0.13
CLN8-209ENST00000635970 PITHD1Q9GZP4 211 aaPredicted RBP14.25□□□□□ -0.13
CLN8-209ENST00000635970 MCUBQ9NWR8 336 aa14.25□□□□□ -0.13
CLN8-209ENST00000635970 TEKT2Q9UIF3 430 aa14.25□□□□□ -0.13
CLN8-209ENST00000635970 CBLCQ9ULV8 474 aa14.25□□□□□ -0.13
CLN8-209ENST00000635970 HSPB11Q9Y547 144 aa14.25□□□□□ -0.13
CLN8-209ENST00000635970 SCN2AQ99250 2005 aa14.25□□□□□ -0.13
CLN8-209ENST00000635970 A0A087WV48 116 aa14.24□□□□□ -0.13
CLN8-209ENST00000635970 A0A0G2JN53 185 aa14.24□□□□□ -0.13
CLN8-209ENST00000635970 ZNF860A6NHJ4 632 aa14.24□□□□□ -0.13
CLN8-209ENST00000635970 C12orf71A8MTZ7 269 aa14.24□□□□□ -0.13
CLN8-209ENST00000635970 EFSO43281 561 aa14.24□□□□□ -0.13
CLN8-209ENST00000635970 SLC6A1P30531 599 aa14.24□□□□□ -0.13
CLN8-209ENST00000635970 SLC1A3P43003 542 aa14.24□□□□□ -0.13
CLN8-209ENST00000635970 RAB8AP61006 207 aa14.24□□□□□ -0.13
CLN8-209ENST00000635970 FOXD4Q12950 439 aaPredicted RBP14.24□□□□□ -0.13
CLN8-209ENST00000635970 ARHGAP40Q5TG30 622 aa14.24□□□□□ -0.13
CLN8-209ENST00000635970 PRAMEF8Q5VWM4 474 aa14.24□□□□□ -0.13
CLN8-209ENST00000635970 PRAMEF7Q5VXH5 474 aa14.24□□□□□ -0.13
CLN8-209ENST00000635970 LRRC69Q6ZNQ3 347 aa14.24□□□□□ -0.13
CLN8-209ENST00000635970 RASSF6Q6ZTQ3 369 aa14.24□□□□□ -0.13
CLN8-209ENST00000635970 HDDC2Q7Z4H3 204 aa14.24□□□□□ -0.13
CLN8-209ENST00000635970 RBM45Q8IUH3 476 aaKnown RBP14.24□□□□□ -0.13
CLN8-209ENST00000635970 UBE2J2Q8N2K1 259 aa14.24□□□□□ -0.13
CLN8-209ENST00000635970 KLHL36Q8N4N3 616 aa14.24□□□□□ -0.13
CLN8-209ENST00000635970 SLC37A3Q8NCC5 494 aa14.24□□□□□ -0.13
CLN8-209ENST00000635970 TTLQ8NG68 377 aa14.24□□□□□ -0.13
CLN8-209ENST00000635970 NEIL3Q8TAT5 605 aa14.24□□□□□ -0.13
CLN8-209ENST00000635970 SAP130Q9H0E3 1048 aa14.24□□□□□ -0.13
CLN8-209ENST00000635970 KCNN2Q9H2S1 579 aa14.24□□□□□ -0.13
CLN8-209ENST00000635970 ANKRD19PQ9H560 264 aa14.24□□□□□ -0.13
CLN8-209ENST00000635970 SIRT3Q9NTG7 399 aaPredicted RBP14.24□□□□□ -0.13
CLN8-209ENST00000635970 CTSFQ9UBX1 484 aa14.24□□□□□ -0.13
CLN8-209ENST00000635970 ADAM29Q9UKF5 820 aa14.24□□□□□ -0.13
CLN8-209ENST00000635970 EXOGQ9Y2C4 368 aaKnown RBP14.24□□□□□ -0.13
CLN8-209ENST00000635970 CLCA3PQ9Y6N3 262 aa14.24□□□□□ -0.13
CLN8-209ENST00000635970 MGAQ8IWI9 3026 aa14.24□□□□□ -0.13
CLN8-209ENST00000635970 LINC00862A6NCI5 91 aa14.23□□□□□ -0.13
CLN8-209ENST00000635970 CLEC3AO75596 197 aa14.23□□□□□ -0.13
CLN8-209ENST00000635970 DHFRP00374 187 aa14.23□□□□□ -0.13
CLN8-209ENST00000635970 CCT3P49368 545 aaKnown RBP14.23□□□□□ -0.13
CLN8-209ENST00000635970 TRA2BP62995 288 aaKnown RBP14.23□□□□□ -0.13
CLN8-209ENST00000635970 MAT1AQ00266 395 aaKnown RBP14.23□□□□□ -0.13
CLN8-209ENST00000635970 TSPAN31Q12999 210 aa14.23□□□□□ -0.13
CLN8-209ENST00000635970 P2RY14Q15391 338 aa14.23□□□□□ -0.13
CLN8-209ENST00000635970 DEFB134Q4QY38 66 aa14.23□□□□□ -0.13
CLN8-209ENST00000635970 SMUG1Q53HV7 270 aa14.23□□□□□ -0.13
CLN8-209ENST00000635970 ZBTB37Q5TC79 503 aa14.23□□□□□ -0.13
CLN8-209ENST00000635970 KHDRBS2Q5VWX1 349 aaKnown RBP14.23□□□□□ -0.13
CLN8-209ENST00000635970 CCNL2Q96S94 520 aaPredicted RBP14.23□□□□□ -0.13
CLN8-209ENST00000635970 ZNF304Q9HCX3 659 aa14.23□□□□□ -0.13
CLN8-209ENST00000635970 LIPT1Q9Y234 373 aa14.23□□□□□ -0.13
CLN8-209ENST00000635970 SSUH2Q9Y2M2 353 aa14.23□□□□□ -0.13
CLN8-209ENST00000635970 YARS2Q9Y2Z4 477 aaKnown RBP14.23□□□□□ -0.13
CLN8-209ENST00000635970 NUP210LQ5VU65 1888 aa14.23□□□□□ -0.13
CLN8-209ENST00000635970 LRIT2A6NDA9 550 aa14.23□□□□□ -0.13
CLN8-209ENST00000635970 GABRPO00591 440 aa14.23□□□□□ -0.13
CLN8-209ENST00000635970 RDH16O75452 317 aa14.23□□□□□ -0.13
CLN8-209ENST00000635970 NR2F1P10589 423 aa14.23□□□□□ -0.13
CLN8-209ENST00000635970 TALDO1P37837 337 aa14.23□□□□□ -0.13
CLN8-209ENST00000635970 MTNR1BP49286 362 aa14.23□□□□□ -0.13
CLN8-209ENST00000635970 RNF144AP50876 292 aaPredicted RBP14.23□□□□□ -0.13
CLN8-209ENST00000635970 RPS26P62854 115 aaKnown RBP14.23□□□□□ -0.13
CLN8-209ENST00000635970 FAM53BQ14153 422 aa14.23□□□□□ -0.13
CLN8-209ENST00000635970 TMEM107Q6UX40 140 aa14.23□□□□□ -0.13
CLN8-209ENST00000635970 LYPD8Q6UX82 237 aa14.23□□□□□ -0.13
CLN8-209ENST00000635970 LRRC28Q86X40 367 aaPredicted RBP14.23□□□□□ -0.13
CLN8-209ENST00000635970 LRRC17Q8N6Y2 441 aa14.23□□□□□ -0.13
CLN8-209ENST00000635970 AMER3Q8N944 861 aa14.23□□□□□ -0.13
CLN8-209ENST00000635970 SYT14Q8NB59 555 aa14.23□□□□□ -0.13
CLN8-209ENST00000635970 SLC9A6Q92581 669 aa14.23□□□□□ -0.13
CLN8-209ENST00000635970 RAB8BQ92930 207 aa14.23□□□□□ -0.13
CLN8-209ENST00000635970 COL26A1Q96A83 441 aa14.23□□□□□ -0.13
CLN8-209ENST00000635970 MS4A6EQ96DS6 147 aa14.23□□□□□ -0.13
CLN8-209ENST00000635970 GPR137Q96N19 417 aa14.23□□□□□ -0.13
CLN8-209ENST00000635970 F2RL3Q96RI0 385 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 130.5 ms