RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 ZNF514Q96K75 400 aaPredicted RBP13.03□□□□□ -0.32
LDB3-209ENST00000623056 GINS4Q9BRT9 223 aa13.03□□□□□ -0.32
LDB3-209ENST00000623056 GMEB2Q9UKD1 530 aa13.03□□□□□ -0.32
LDB3-209ENST00000623056 SLC35A3Q9Y2D2 325 aa13.03□□□□□ -0.32
LDB3-209ENST00000623056 GOLGA4Q13439 2230 aaKnown RBP13.03□□□□□ -0.32
LDB3-209ENST00000623056 NUMA1Q14980 2115 aa13.03□□□□□ -0.32
LDB3-209ENST00000623056 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.02□□□□□ -0.32
LDB3-209ENST00000623056 ANKRD61A6NGH8 418 aa13.02□□□□□ -0.32
LDB3-209ENST00000623056 SPINT1O43278 529 aa13.02□□□□□ -0.32
LDB3-209ENST00000623056 RCBTB2O95199 551 aa13.02□□□□□ -0.32
LDB3-209ENST00000623056 ZNF35P13682 527 aa13.02□□□□□ -0.32
LDB3-209ENST00000623056 CSNK2A2P19784 350 aaPredicted RBP13.02□□□□□ -0.32
LDB3-209ENST00000623056 DPP4P27487 766 aa13.02□□□□□ -0.32
LDB3-209ENST00000623056 P2RX1P51575 399 aa13.02□□□□□ -0.32
LDB3-209ENST00000623056 IL10RAQ13651 578 aa13.02□□□□□ -0.32
LDB3-209ENST00000623056 NUDT18Q6ZVK8 323 aa13.02□□□□□ -0.32
LDB3-209ENST00000623056 FCRLAQ7L513 359 aa13.02□□□□□ -0.32
LDB3-209ENST00000623056 UBE2Q1Q7Z7E8 422 aa13.02□□□□□ -0.32
LDB3-209ENST00000623056 MCATQ8IVS2 390 aaKnown RBP13.02□□□□□ -0.32
LDB3-209ENST00000623056 ARL14Q8N4G2 192 aa13.02□□□□□ -0.32
LDB3-209ENST00000623056 LILRB1Q8NHL6 650 aaPredicted RBP13.02□□□□□ -0.32
LDB3-209ENST00000623056 CXorf40AQ8TE69 158 aa13.02□□□□□ -0.32
LDB3-209ENST00000623056 NUS1Q96E22 293 aa13.02□□□□□ -0.32
LDB3-209ENST00000623056 GIMAP5Q96F15 307 aa13.02□□□□□ -0.32
LDB3-209ENST00000623056 LRRC46Q96FV0 321 aa13.02□□□□□ -0.32
LDB3-209ENST00000623056 MENTQ9BUN1 341 aa13.02□□□□□ -0.32
LDB3-209ENST00000623056 ACTRT3Q9BYD9 372 aa13.02□□□□□ -0.32
LDB3-209ENST00000623056 TAS2R10Q9NYW0 307 aa13.02□□□□□ -0.32
LDB3-209ENST00000623056 ATPIF1Q9UII2 106 aa13.02□□□□□ -0.32
LDB3-209ENST00000623056 CENPVL1A0A0U1RR11 272 aa13.02□□□□□ -0.33
LDB3-209ENST00000623056 IFITM5A6NNB3 132 aa13.02□□□□□ -0.33
LDB3-209ENST00000623056 IGF2P01344 180 aa13.02□□□□□ -0.33
LDB3-209ENST00000623056 VSIG10L2P0DP72 767 aa13.02□□□□□ -0.33
LDB3-209ENST00000623056 SYN1P17600 705 aa13.02□□□□□ -0.33
LDB3-209ENST00000623056 METAP1P53582 386 aa13.02□□□□□ -0.33
LDB3-209ENST00000623056 LTB4RQ15722 352 aa13.02□□□□□ -0.33
LDB3-209ENST00000623056 CSRP2Q16527 193 aa13.02□□□□□ -0.33
LDB3-209ENST00000623056 OR7E24Q6IFN5 339 aa13.02□□□□□ -0.33
LDB3-209ENST00000623056 PAQR7Q86WK9 346 aa13.02□□□□□ -0.33
LDB3-209ENST00000623056 HDDC3Q8N4P3 179 aa13.02□□□□□ -0.33
LDB3-209ENST00000623056 OR5K2Q8NHB8 316 aa13.02□□□□□ -0.33
LDB3-209ENST00000623056 SLC2A12Q8TD20 617 aa13.02□□□□□ -0.33
LDB3-209ENST00000623056 ADAMTS15Q8TE58 950 aa13.02□□□□□ -0.33
LDB3-209ENST00000623056 TMEM239Q8WW34 195 aa13.02□□□□□ -0.33
LDB3-209ENST00000623056 PDCD1LG2Q9BQ51 273 aa13.02□□□□□ -0.33
LDB3-209ENST00000623056 SLC46A2Q9BY10 475 aa13.02□□□□□ -0.33
LDB3-209ENST00000623056 PITHD1Q9GZP4 211 aaPredicted RBP13.02□□□□□ -0.33
LDB3-209ENST00000623056 PCBD2Q9H0N5 130 aa13.02□□□□□ -0.33
LDB3-209ENST00000623056 SLC25A18Q9H1K4 315 aa13.02□□□□□ -0.33
LDB3-209ENST00000623056 SLC6A17Q9H1V8 727 aa13.02□□□□□ -0.33
LDB3-209ENST00000623056 CCDC86Q9H6F5 360 aaKnown RBP13.02□□□□□ -0.33
LDB3-209ENST00000623056 POT1Q9NUX5 634 aa13.02□□□□□ -0.33
LDB3-209ENST00000623056 HAO2Q9NYQ3 351 aa13.02□□□□□ -0.33
LDB3-209ENST00000623056 CES1P1Q9UKY3 287 aa13.02□□□□□ -0.33
LDB3-209ENST00000623056 FOXJ3Q9UPW0 622 aa13.02□□□□□ -0.33
LDB3-209ENST00000623056 LRRK1Q38SD2 2015 aa13.02□□□□□ -0.33
LDB3-209ENST00000623056 TRAV27A0A087WT01 109 aa13.01□□□□□ -0.33
LDB3-209ENST00000623056 TRAPPC13A5PLN9 417 aa13.01□□□□□ -0.33
LDB3-209ENST00000623056 MPTX1A8MV57 137 aa13.01□□□□□ -0.33
LDB3-209ENST00000623056 PYCARD-AS1I3L0S3 204 aa13.01□□□□□ -0.33
LDB3-209ENST00000623056 KPNA3O00505 521 aaPredicted RBP13.01□□□□□ -0.33
LDB3-209ENST00000623056 PTP4A3O75365 173 aa13.01□□□□□ -0.33
LDB3-209ENST00000623056 AQP8O94778 261 aa13.01□□□□□ -0.33
LDB3-209ENST00000623056 SPDEFO95238 335 aa13.01□□□□□ -0.33
LDB3-209ENST00000623056 SRMP19623 302 aa13.01□□□□□ -0.33
LDB3-209ENST00000623056 HTR2AP28223 471 aa13.01□□□□□ -0.33
LDB3-209ENST00000623056 CBX5P45973 191 aa13.01□□□□□ -0.33
LDB3-209ENST00000623056 CLDN12P56749 244 aa13.01□□□□□ -0.33
LDB3-209ENST00000623056 PPP2CBP62714 309 aa13.01□□□□□ -0.33
LDB3-209ENST00000623056 PPP2CAP67775 309 aa13.01□□□□□ -0.33
LDB3-209ENST00000623056 SIRPAP78324 504 aa13.01□□□□□ -0.33
LDB3-209ENST00000623056 DEFA5Q01523 94 aa13.01□□□□□ -0.33
LDB3-209ENST00000623056 EIF2B5Q13144 721 aaKnown RBP13.01□□□□□ -0.33
LDB3-209ENST00000623056 TMEM69Q5SWH9 247 aa13.01□□□□□ -0.33
LDB3-209ENST00000623056 STPG1Q5TH74 334 aa13.01□□□□□ -0.33
LDB3-209ENST00000623056 DEFB128Q7Z7B8 93 aa13.01□□□□□ -0.33
LDB3-209ENST00000623056 ACOT4Q8N9L9 421 aa13.01□□□□□ -0.33
LDB3-209ENST00000623056 SLC16A11Q8NCK7 471 aa13.01□□□□□ -0.33
LDB3-209ENST00000623056 CDS1Q92903 461 aa13.01□□□□□ -0.33
LDB3-209ENST00000623056 RNF208Q9H0X6 261 aa13.01□□□□□ -0.33
LDB3-209ENST00000623056 NOX4Q9NPH5 578 aa13.01□□□□□ -0.33
LDB3-209ENST00000623056 SLC23A2Q9UGH3 650 aa13.01□□□□□ -0.33
LDB3-209ENST00000623056 GPR34Q9UPC5 381 aa13.01□□□□□ -0.33
LDB3-209ENST00000623056 SCN5AQ14524 2016 aa13.01□□□□□ -0.33
LDB3-209ENST00000623056 TRBV2A0A0J9YWF9 115 aa13.01□□□□□ -0.33
LDB3-209ENST00000623056 ZNF98A6NK75 572 aa13.01□□□□□ -0.33
LDB3-209ENST00000623056 ZNF879B4DU55 563 aa13.01□□□□□ -0.33
LDB3-209ENST00000623056 PIN1P1O15428 100 aa13.01□□□□□ -0.33
LDB3-209ENST00000623056 ERI3O43414 337 aaKnown RBP13.01□□□□□ -0.33
LDB3-209ENST00000623056 FMO6PO60774 539 aa13.01□□□□□ -0.33
LDB3-209ENST00000623056 RLN2P04090 185 aa13.01□□□□□ -0.33
LDB3-209ENST00000623056 F3P13726 295 aa13.01□□□□□ -0.33
LDB3-209ENST00000623056 ZNF3P17036 446 aa13.01□□□□□ -0.33
LDB3-209ENST00000623056 HIST1H1TP22492 207 aaPredicted RBP13.01□□□□□ -0.33
LDB3-209ENST00000623056 MPIP34949 423 aa13.01□□□□□ -0.33
LDB3-209ENST00000623056 RPL13AP3Q6NVV1 102 aa13.01□□□□□ -0.33
LDB3-209ENST00000623056 SLC48A1Q6P1K1 146 aa13.01□□□□□ -0.33
LDB3-209ENST00000623056 ZNF433Q8N7K0 673 aaPredicted RBP13.01□□□□□ -0.33
LDB3-209ENST00000623056 RELL2Q8NC24 303 aaPredicted RBP13.01□□□□□ -0.33
LDB3-209ENST00000623056 DNAAF1Q8NEP3 725 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms