RNA–Protein interactions for RNA: ENST00000618562.1

VEGFC-202, Transcript of vascular endothelial growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VEGFC, Length 2,064 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFC-202ENST00000618562 SIRT6Q8N6T7 355 aa23.24■■□□□ 1.31
VEGFC-202ENST00000618562 PFN4Q8NHR9 129 aa23.24■■□□□ 1.31
VEGFC-202ENST00000618562 STT3BQ8TCJ2 826 aa23.24■■□□□ 1.31
VEGFC-202ENST00000618562 SPRYD4Q8WW59 207 aaPredicted RBP23.24■■□□□ 1.31
VEGFC-202ENST00000618562 APMAPQ9HDC9 416 aa23.24■■□□□ 1.31
VEGFC-202ENST00000618562 OCIAD1Q9NX40 245 aa23.24■■□□□ 1.31
VEGFC-202ENST00000618562 IGLV3-12A0A075B6K2 115 aa23.24■■□□□ 1.31
VEGFC-202ENST00000618562 A0A1W2PQ09 198 aa23.24■■□□□ 1.31
VEGFC-202ENST00000618562 CASKO14936 926 aa23.24■■□□□ 1.31
VEGFC-202ENST00000618562 CELP19835 753 aa23.24■■□□□ 1.31
VEGFC-202ENST00000618562 PAICSP22234 425 aaKnown RBP23.24■■□□□ 1.31
VEGFC-202ENST00000618562 ASAH1Q13510 395 aa23.24■■□□□ 1.31
VEGFC-202ENST00000618562 CLPPQ16740 277 aaPredicted RBP23.24■■□□□ 1.31
VEGFC-202ENST00000618562 NKAIN1Q4KMZ8 207 aa23.24■■□□□ 1.31
VEGFC-202ENST00000618562 GRAMD2AQ8IUY3 354 aa23.24■■□□□ 1.31
VEGFC-202ENST00000618562 ZNF559Q9BR84 538 aa23.24■■□□□ 1.31
VEGFC-202ENST00000618562 NUDT9Q9BW91 350 aa23.24■■□□□ 1.31
VEGFC-202ENST00000618562 TIGARQ9NQ88 270 aa23.24■■□□□ 1.31
VEGFC-202ENST00000618562 ITGB1BP2Q9UKP3 347 aa23.24■■□□□ 1.31
VEGFC-202ENST00000618562 TTC28Q96AY4 2481 aa23.23■■□□□ 1.31
VEGFC-202ENST00000618562 PTNP21246 168 aa23.23■■□□□ 1.31
VEGFC-202ENST00000618562 PPICP45877 212 aa23.23■■□□□ 1.31
VEGFC-202ENST00000618562 RFX2P48378 723 aa23.23■■□□□ 1.31
VEGFC-202ENST00000618562 ATP12AP54707 1039 aa23.23■■□□□ 1.31
VEGFC-202ENST00000618562 OR2B6P58173 313 aa23.23■■□□□ 1.31
VEGFC-202ENST00000618562 GPR50Q13585 617 aa23.23■■□□□ 1.31
VEGFC-202ENST00000618562 CPEB4Q17RY0 729 aaKnown RBP eCLIP23.23■■□□□ 1.31
VEGFC-202ENST00000618562 PLBD1Q6P4A8 553 aa23.23■■□□□ 1.31
VEGFC-202ENST00000618562 LANCL3Q6ZV70 420 aa23.23■■□□□ 1.31
VEGFC-202ENST00000618562 MEPCEQ7L2J0 689 aaKnown RBP23.23■■□□□ 1.31
VEGFC-202ENST00000618562 ACBD7Q8N6N7 88 aa23.23■■□□□ 1.31
VEGFC-202ENST00000618562 PLPP5Q8NEB5 264 aa23.23■■□□□ 1.31
VEGFC-202ENST00000618562 C7orf57Q8NEG2 295 aa23.23■■□□□ 1.31
VEGFC-202ENST00000618562 DNAJA4Q8WW22 397 aaPredicted RBP23.23■■□□□ 1.31
VEGFC-202ENST00000618562 NXF5Q9H1B4 397 aaKnown RBP23.23■■□□□ 1.31
VEGFC-202ENST00000618562 C20orf141Q9NUB4 165 aa23.23■■□□□ 1.31
VEGFC-202ENST00000618562 DNAJB12Q9NXW2 375 aaKnown RBP23.23■■□□□ 1.31
VEGFC-202ENST00000618562 MED31Q9Y3C7 131 aa23.23■■□□□ 1.31
VEGFC-202ENST00000618562 FAM183AA6NL82 134 aa23.23■■□□□ 1.31
VEGFC-202ENST00000618562 GABRPO00591 440 aa23.23■■□□□ 1.31
VEGFC-202ENST00000618562 POLR1CO15160 346 aaPredicted RBP23.23■■□□□ 1.31
VEGFC-202ENST00000618562 ADAM11O75078 769 aa23.23■■□□□ 1.31
VEGFC-202ENST00000618562 CTBP2P56545 445 aa23.23■■□□□ 1.31
VEGFC-202ENST00000618562 FGFBP1Q14512 234 aa23.23■■□□□ 1.31
VEGFC-202ENST00000618562 ZNF544Q6NX49 715 aa23.23■■□□□ 1.31
VEGFC-202ENST00000618562 UBQLNLQ8IYU4 475 aa23.23■■□□□ 1.31
VEGFC-202ENST00000618562 OR51G2Q8NGK0 314 aa23.23■■□□□ 1.31
VEGFC-202ENST00000618562 OR4C3Q8NH37 302 aa23.23■■□□□ 1.31
VEGFC-202ENST00000618562 ATOH1Q92858 354 aaPredicted RBP23.23■■□□□ 1.31
VEGFC-202ENST00000618562 BPIFA2Q96DR5 249 aa23.23■■□□□ 1.31
VEGFC-202ENST00000618562 TMED9Q9BVK6 235 aa23.23■■□□□ 1.31
VEGFC-202ENST00000618562 FAM86C2PA6NEL3 165 aa23.22■■□□□ 1.31
VEGFC-202ENST00000618562 TMCC2O75069 709 aa23.22■■□□□ 1.31
VEGFC-202ENST00000618562 CFL1P23528 166 aaKnown RBP23.22■■□□□ 1.31
VEGFC-202ENST00000618562 KCNJ8Q15842 424 aa23.22■■□□□ 1.31
VEGFC-202ENST00000618562 ZNF385CQ66K41 422 aaPredicted RBP23.22■■□□□ 1.31
VEGFC-202ENST00000618562 BMP8AQ7Z5Y6 402 aa23.22■■□□□ 1.31
VEGFC-202ENST00000618562 PPP1R3BQ86XI6 285 aa23.22■■□□□ 1.31
VEGFC-202ENST00000618562 MARCH9Q86YJ5 346 aa23.22■■□□□ 1.31
VEGFC-202ENST00000618562 ATP6V1C2Q8NEY4 427 aa23.22■■□□□ 1.31
VEGFC-202ENST00000618562 OR14A16Q8NHC5 309 aa23.22■■□□□ 1.31
VEGFC-202ENST00000618562 DAZLQ92904 295 aaKnown RBP23.22■■□□□ 1.31
VEGFC-202ENST00000618562 ADIPOR1Q96A54 375 aa23.22■■□□□ 1.31
VEGFC-202ENST00000618562 ATP13A2Q9NQ11 1180 aa23.22■■□□□ 1.31
VEGFC-202ENST00000618562 CMC2Q9NRP2 79 aa23.22■■□□□ 1.31
VEGFC-202ENST00000618562 ST6GALNAC1Q9NSC7 600 aaPredicted RBP23.22■■□□□ 1.31
VEGFC-202ENST00000618562 VASNQ6EMK4 673 aa23.21■■□□□ 1.31
VEGFC-202ENST00000618562 ZNF517Q6ZMY9 492 aaPredicted RBP23.21■■□□□ 1.31
VEGFC-202ENST00000618562 NEIL3Q8TAT5 605 aa23.21■■□□□ 1.31
VEGFC-202ENST00000618562 OTULINQ96BN8 352 aa23.21■■□□□ 1.31
VEGFC-202ENST00000618562 TMEM27Q9HBJ8 222 aa23.21■■□□□ 1.31
VEGFC-202ENST00000618562 INPP5EQ9NRR6 644 aa23.21■■□□□ 1.31
VEGFC-202ENST00000618562 PSMD4P55036 377 aaKnown RBP23.21■■□□□ 1.31
VEGFC-202ENST00000618562 FAAH2Q6GMR7 532 aa23.21■■□□□ 1.31
VEGFC-202ENST00000618562 SMARCD3Q6STE5 483 aa23.21■■□□□ 1.31
VEGFC-202ENST00000618562 KLBQ86Z14 1044 aa23.21■■□□□ 1.31
VEGFC-202ENST00000618562 HDHD5Q9BXW7 423 aa23.21■■□□□ 1.31
VEGFC-202ENST00000618562 SLC22A4Q9H015 551 aa23.21■■□□□ 1.31
VEGFC-202ENST00000618562 SIGLEC7Q9Y286 467 aa23.21■■□□□ 1.31
VEGFC-202ENST00000618562 GPR179Q6PRD1 2367 aa23.2■■□□□ 1.3
VEGFC-202ENST00000618562 C12orf71A8MTZ7 269 aa23.2■■□□□ 1.3
VEGFC-202ENST00000618562 KHNYNO15037 678 aaKnown RBP23.2■■□□□ 1.3
VEGFC-202ENST00000618562 GDF9O60383 454 aa23.2■■□□□ 1.3
VEGFC-202ENST00000618562 CSF3P09919 207 aa23.2■■□□□ 1.3
VEGFC-202ENST00000618562 FUT1P19526 365 aa23.2■■□□□ 1.3
VEGFC-202ENST00000618562 ACAA2P42765 397 aaKnown RBP23.2■■□□□ 1.3
VEGFC-202ENST00000618562 HTR3AP46098 478 aa23.2■■□□□ 1.3
VEGFC-202ENST00000618562 METAP1DQ6UB28 335 aaPredicted RBP23.2■■□□□ 1.3
VEGFC-202ENST00000618562 RAB43Q86YS6 212 aa23.2■■□□□ 1.3
VEGFC-202ENST00000618562 C9orf40Q8IXQ3 194 aa23.2■■□□□ 1.3
VEGFC-202ENST00000618562 DCLRE1CQ96SD1 692 aaKnown RBP23.2■■□□□ 1.3
VEGFC-202ENST00000618562 FRG2CA6NGY1 282 aa23.2■■□□□ 1.3
VEGFC-202ENST00000618562 SLC22A31A6NKX4 558 aa23.2■■□□□ 1.3
VEGFC-202ENST00000618562 CHP2O43745 196 aa23.2■■□□□ 1.3
VEGFC-202ENST00000618562 ZNF883P0CG24 379 aa23.2■■□□□ 1.3
VEGFC-202ENST00000618562 GRK6P43250 576 aa23.2■■□□□ 1.3
VEGFC-202ENST00000618562 DCDP81605 110 aaKnown RBP23.2■■□□□ 1.3
VEGFC-202ENST00000618562 ZFP36L1Q07352 338 aaKnown RBP23.2■■□□□ 1.3
VEGFC-202ENST00000618562 EBPQ15125 230 aaKnown RBP23.2■■□□□ 1.3
VEGFC-202ENST00000618562 DBX2Q6ZNG2 339 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms