RNA–Protein interactions for RNA: ENST00000585956.5

PTBP1-208, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-208ENST00000585956 DSCR9P59020 149 aa17.08■□□□□ 0.32
PTBP1-208ENST00000585956 SWI5Q1ZZU3 235 aa17.08■□□□□ 0.32
PTBP1-208ENST00000585956 AP1ARQ63HQ0 302 aa17.08■□□□□ 0.32
PTBP1-208ENST00000585956 CYB5R2Q6BCY4 276 aa17.08■□□□□ 0.32
PTBP1-208ENST00000585956 KLHL17Q6TDP4 642 aa17.08■□□□□ 0.32
PTBP1-208ENST00000585956 ZNF563Q8TA94 476 aa17.08■□□□□ 0.32
PTBP1-208ENST00000585956 SLC25A43Q8WUT9 341 aaPredicted RBP17.08■□□□□ 0.32
PTBP1-208ENST00000585956 XAGE5Q8WWM1 108 aa17.08■□□□□ 0.32
PTBP1-208ENST00000585956 TMEM234Q8WY98 164 aa17.08■□□□□ 0.32
PTBP1-208ENST00000585956 ROPN1LQ96C74 230 aa17.08■□□□□ 0.32
PTBP1-208ENST00000585956 C19orf24Q9BVV8 132 aa17.08■□□□□ 0.32
PTBP1-208ENST00000585956 CHODLQ9H9P2 273 aa17.08■□□□□ 0.32
PTBP1-208ENST00000585956 MOKQ9UQ07 419 aa17.08■□□□□ 0.32
PTBP1-208ENST00000585956 WDR45Q9Y484 360 aa17.08■□□□□ 0.32
PTBP1-208ENST00000585956 IGHV4-61A0A0C4DH41 118 aa17.07■□□□□ 0.32
PTBP1-208ENST00000585956 USF1P22415 310 aaPredicted RBP17.07■□□□□ 0.32
PTBP1-208ENST00000585956 EFNA4P52798 201 aa17.07■□□□□ 0.32
PTBP1-208ENST00000585956 SLC17A1Q14916 467 aa17.07■□□□□ 0.32
PTBP1-208ENST00000585956 HIKESHIQ53FT3 197 aa17.07■□□□□ 0.32
PTBP1-208ENST00000585956 SAXO2Q658L1 398 aa17.07■□□□□ 0.32
PTBP1-208ENST00000585956 ZNF544Q6NX49 715 aa17.07■□□□□ 0.32
PTBP1-208ENST00000585956 GRINAQ7Z429 371 aa17.07■□□□□ 0.32
PTBP1-208ENST00000585956 ANKS4BQ8N8V4 417 aa17.07■□□□□ 0.32
PTBP1-208ENST00000585956 ANKFN1Q8N957 763 aa17.07■□□□□ 0.32
PTBP1-208ENST00000585956 PIGXQ8TBF5 258 aa17.07■□□□□ 0.32
PTBP1-208ENST00000585956 MSI2Q96DH6 328 aaKnown RBP17.07■□□□□ 0.32
PTBP1-208ENST00000585956 ZNF385AQ96PM9 386 aaKnown RBP17.07■□□□□ 0.32
PTBP1-208ENST00000585956 C20orf27Q9GZN8 174 aa17.07■□□□□ 0.32
PTBP1-208ENST00000585956 SEC61A2Q9H9S3 476 aa17.07■□□□□ 0.32
PTBP1-208ENST00000585956 EML4Q9HC35 981 aaKnown RBP17.07■□□□□ 0.32
PTBP1-208ENST00000585956 OSGIN1Q9UJX0 560 aa17.07■□□□□ 0.32
PTBP1-208ENST00000585956 HDGFL3Q9Y3E1 203 aa17.07■□□□□ 0.32
PTBP1-208ENST00000585956 TMED7-TICAM2A0A0A6YYA0 188 aa17.06■□□□□ 0.32
PTBP1-208ENST00000585956 RNASET2O00584 256 aaKnown RBP17.06■□□□□ 0.32
PTBP1-208ENST00000585956 KLF11O14901 512 aa17.06■□□□□ 0.32
PTBP1-208ENST00000585956 ANKRD28O15084 1053 aa17.06■□□□□ 0.32
PTBP1-208ENST00000585956 CPSF4O95639 269 aaKnown RBP17.06■□□□□ 0.32
PTBP1-208ENST00000585956 AK1P00568 194 aa17.06■□□□□ 0.32
PTBP1-208ENST00000585956 CHRM4P08173 479 aa17.06■□□□□ 0.32
PTBP1-208ENST00000585956 KCNJ10P78508 379 aa17.06■□□□□ 0.32
PTBP1-208ENST00000585956 LSM11P83369 360 aaKnown RBP eCLIP17.06■□□□□ 0.326e-8■□□□□ 9.5
PTBP1-208ENST00000585956 EMX2Q04743 252 aa17.06■□□□□ 0.32
PTBP1-208ENST00000585956 GGTLC2Q14390 218 aa17.06■□□□□ 0.32
PTBP1-208ENST00000585956 PDCD2Q16342 344 aaPredicted RBP17.06■□□□□ 0.32
PTBP1-208ENST00000585956 SYPL1Q16563 259 aa17.06■□□□□ 0.32
PTBP1-208ENST00000585956 LINGO2Q7L985 606 aa17.06■□□□□ 0.32
PTBP1-208ENST00000585956 FBXO17Q96EF6 278 aa17.06■□□□□ 0.32
PTBP1-208ENST00000585956 PKNOX2Q96KN3 472 aa17.06■□□□□ 0.32
PTBP1-208ENST00000585956 PRPF18Q99633 342 aaKnown RBP17.06■□□□□ 0.32
PTBP1-208ENST00000585956 AKTIPQ9H8T0 292 aa17.06■□□□□ 0.32
PTBP1-208ENST00000585956 ASIC5Q9NY37 505 aa17.06■□□□□ 0.32
PTBP1-208ENST00000585956 TMEM181Q9P2C4 612 aa17.06■□□□□ 0.32
PTBP1-208ENST00000585956 TMED7Q9Y3B3 224 aa17.06■□□□□ 0.32
PTBP1-208ENST00000585956 TENM1Q9UKZ4 2725 aa17.06■□□□□ 0.32
PTBP1-208ENST00000585956 IGHV1-18A0A0C4DH31 117 aa17.05■□□□□ 0.32
PTBP1-208ENST00000585956 DUXAA6NLW8 204 aa17.05■□□□□ 0.32
PTBP1-208ENST00000585956 HMGN4O00479 90 aa17.05■□□□□ 0.32
PTBP1-208ENST00000585956 LMX1BO60663 402 aa17.05■□□□□ 0.32
PTBP1-208ENST00000585956 BPGMP07738 259 aa17.05■□□□□ 0.32
PTBP1-208ENST00000585956 CDH2P19022 906 aaPredicted RBP17.05■□□□□ 0.32
PTBP1-208ENST00000585956 ETV4P43268 484 aa17.05■□□□□ 0.32
PTBP1-208ENST00000585956 MAPK11Q15759 364 aa17.05■□□□□ 0.32
PTBP1-208ENST00000585956 FAM120AOSQ5T036 256 aa17.05■□□□□ 0.32
PTBP1-208ENST00000585956 CNPY4Q8N129 248 aa17.05■□□□□ 0.32
PTBP1-208ENST00000585956 NATD1Q8N6N6 113 aa17.05■□□□□ 0.32
PTBP1-208ENST00000585956 ZNF781Q8N8C0 355 aa17.05■□□□□ 0.32
PTBP1-208ENST00000585956 PROX1Q92786 737 aa17.05■□□□□ 0.32
PTBP1-208ENST00000585956 ARL8AQ96BM9 186 aa17.05■□□□□ 0.32
PTBP1-208ENST00000585956 C3orf49Q96BT1 292 aa17.05■□□□□ 0.32
PTBP1-208ENST00000585956 TEX37Q96LM6 180 aa17.05■□□□□ 0.32
PTBP1-208ENST00000585956 SHARPINQ9H0F6 387 aa17.05■□□□□ 0.32
PTBP1-208ENST00000585956 SLC35A3Q9Y2D2 325 aa17.05■□□□□ 0.32
PTBP1-208ENST00000585956 GPR171O14626 319 aa17.04■□□□□ 0.32
PTBP1-208ENST00000585956 TACR3P29371 465 aa17.04■□□□□ 0.32
PTBP1-208ENST00000585956 APOBEC3AP31941 199 aaPredicted RBP17.04■□□□□ 0.32
PTBP1-208ENST00000585956 NR4A2P43354 598 aa17.04■□□□□ 0.32
PTBP1-208ENST00000585956 MAGEA8P43361 318 aa17.04■□□□□ 0.32
PTBP1-208ENST00000585956 P2RY4P51582 365 aa17.04■□□□□ 0.32
PTBP1-208ENST00000585956 TUBA1BP68363 451 aa17.04■□□□□ 0.32
PTBP1-208ENST00000585956 TUBA4AP68366 448 aa17.04■□□□□ 0.32
PTBP1-208ENST00000585956 SPANXN4Q5MJ08 99 aa17.04■□□□□ 0.32
PTBP1-208ENST00000585956 OR7E24Q6IFN5 339 aa17.04■□□□□ 0.32
PTBP1-208ENST00000585956 BHLHB9Q6PI77 547 aa17.04■□□□□ 0.32
PTBP1-208ENST00000585956 TUBA1AQ71U36 451 aa17.04■□□□□ 0.32
PTBP1-208ENST00000585956 MYPOPQ86VE0 399 aaPredicted RBP17.04■□□□□ 0.32
PTBP1-208ENST00000585956 ARFGAP2Q8N6H7 521 aa17.04■□□□□ 0.32
PTBP1-208ENST00000585956 TMEM99Q8N816 258 aa17.04■□□□□ 0.32
PTBP1-208ENST00000585956 OR8J2Q8NGG1 315 aa17.04■□□□□ 0.32
PTBP1-208ENST00000585956 KIF18AQ8NI77 898 aa17.04■□□□□ 0.32
PTBP1-208ENST00000585956 ZHX1-C8orf76Q96EF9 292 aa17.04■□□□□ 0.32
PTBP1-208ENST00000585956 FOXN4Q96NZ1 517 aa17.04■□□□□ 0.32
PTBP1-208ENST00000585956 SLC38A1Q9H2H9 487 aa17.04■□□□□ 0.32
PTBP1-208ENST00000585956 PPCSQ9HAB8 311 aa17.04■□□□□ 0.32
PTBP1-208ENST00000585956 EXOSC3Q9NQT5 275 aaKnown RBP17.04■□□□□ 0.32
PTBP1-208ENST00000585956 NOP53Q9NZM5 478 aaKnown RBP17.04■□□□□ 0.32
PTBP1-208ENST00000585956 DCTN4Q9UJW0 460 aa17.04■□□□□ 0.32
PTBP1-208ENST00000585956 DNPH1O43598 174 aa17.03■□□□□ 0.32
PTBP1-208ENST00000585956 AKR7A3O95154 331 aa17.03■□□□□ 0.32
PTBP1-208ENST00000585956 GUSBP08236 651 aa17.03■□□□□ 0.32
PTBP1-208ENST00000585956 UQCRC2P22695 453 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms