RNA–Protein interactions for RNA: ENST00000585241.5

SS18-226, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 774 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-226ENST00000585241 ACKR4Q9NPB9 350 aa14.58□□□□□ -0.08
SS18-226ENST00000585241 C20orf141Q9NUB4 165 aa14.58□□□□□ -0.08
SS18-226ENST00000585241 POFUT2Q9Y2G5 429 aa14.58□□□□□ -0.08
SS18-226ENST00000585241 SPIN1Q9Y657 262 aaPredicted RBP14.58□□□□□ -0.08
SS18-226ENST00000585241 MPDZO75970 2070 aa14.57□□□□□ -0.08
SS18-226ENST00000585241 TRAV36DV7A0A075B6V5 113 aa14.57□□□□□ -0.08
SS18-226ENST00000585241 ZC3H12DA2A288 527 aaKnown RBP14.57□□□□□ -0.08
SS18-226ENST00000585241 ENO4A6NNW6 628 aa14.57□□□□□ -0.08
SS18-226ENST00000585241 LINC01387J3KSC0 135 aa14.57□□□□□ -0.08
SS18-226ENST00000585241 ACOT7O00154 380 aa14.57□□□□□ -0.08
SS18-226ENST00000585241 IFI30P13284 250 aa14.57□□□□□ -0.08
SS18-226ENST00000585241 IL11P20809 199 aa14.57□□□□□ -0.08
SS18-226ENST00000585241 GSTM3P21266 225 aa14.57□□□□□ -0.08
SS18-226ENST00000585241 IGFBP5P24593 272 aa14.57□□□□□ -0.08
SS18-226ENST00000585241 CLK1P49759 484 aaKnown RBP14.57□□□□□ -0.08
SS18-226ENST00000585241 AQP4P55087 323 aa14.57□□□□□ -0.08
SS18-226ENST00000585241 GFRA1P56159 465 aa14.57□□□□□ -0.08
SS18-226ENST00000585241 PPIAP62937 165 aaKnown RBP14.57□□□□□ -0.08
SS18-226ENST00000585241 CRYZQ08257 329 aaKnown RBP14.57□□□□□ -0.08
SS18-226ENST00000585241 COX10Q12887 443 aa14.57□□□□□ -0.08
SS18-226ENST00000585241 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.57□□□□□ -0.08
SS18-226ENST00000585241 RAET1LQ5VY80 246 aa14.57□□□□□ -0.08
SS18-226ENST00000585241 IZUMO2Q6UXV1 221 aa14.57□□□□□ -0.08
SS18-226ENST00000585241 ASB18Q6ZVZ8 466 aa14.57□□□□□ -0.08
SS18-226ENST00000585241 SLC46A3Q7Z3Q1 461 aa14.57□□□□□ -0.08
SS18-226ENST00000585241 YRDCQ86U90 279 aaKnown RBP14.57□□□□□ -0.08
SS18-226ENST00000585241 GALNT4Q8N4A0 578 aa14.57□□□□□ -0.08
SS18-226ENST00000585241 SLC39A7Q92504 469 aa14.57□□□□□ -0.08
SS18-226ENST00000585241 BPIFA2Q96DR5 249 aa14.57□□□□□ -0.08
SS18-226ENST00000585241 CRELD1Q96HD1 420 aa14.57□□□□□ -0.08
SS18-226ENST00000585241 FAM46AQ96IP4 442 aaKnown RBP14.57□□□□□ -0.08
SS18-226ENST00000585241 UBL7Q96S82 380 aaPredicted RBP14.57□□□□□ -0.08
SS18-226ENST00000585241 PTDSS2Q9BVG9 487 aa14.57□□□□□ -0.08
SS18-226ENST00000585241 SERINC1Q9NRX5 453 aa14.57□□□□□ -0.08
SS18-226ENST00000585241 SMPD3Q9NY59 655 aaPredicted RBP14.57□□□□□ -0.08
SS18-226ENST00000585241 KIF17Q9P2E2 1029 aa14.57□□□□□ -0.08
SS18-226ENST00000585241 ZMIZ1Q9ULJ6 1067 aa14.57□□□□□ -0.08
SS18-226ENST00000585241 B3GNT3Q9Y2A9 372 aa14.57□□□□□ -0.08
SS18-226ENST00000585241 ACACBO00763 2458 aa14.57□□□□□ -0.08
SS18-226ENST00000585241 TPRP12270 2363 aaKnown RBP14.56□□□□□ -0.08
SS18-226ENST00000585241 LAMA5O15230 3695 aa14.56□□□□□ -0.08
SS18-226ENST00000585241 FAM166BA8MTA8 275 aa14.56□□□□□ -0.08
SS18-226ENST00000585241 E9PQ18 207 aa14.56□□□□□ -0.08
SS18-226ENST00000585241 KPNA4O00629 521 aaPredicted RBP14.56□□□□□ -0.08
SS18-226ENST00000585241 MAKP20794 623 aa14.56□□□□□ -0.08
SS18-226ENST00000585241 CHMP24386 653 aa14.56□□□□□ -0.08
SS18-226ENST00000585241 RFC3P40938 356 aa14.56□□□□□ -0.08
SS18-226ENST00000585241 MAGEA5P43359 124 aa14.56□□□□□ -0.08
SS18-226ENST00000585241 RAD23AP54725 363 aa14.56□□□□□ -0.08
SS18-226ENST00000585241 RAC1P63000 192 aa14.56□□□□□ -0.08
SS18-226ENST00000585241 FOXK2Q01167 660 aa14.56□□□□□ -0.08
SS18-226ENST00000585241 ZNF74Q16587 644 aa14.56□□□□□ -0.08
SS18-226ENST00000585241 SYT14P1Q58G82 188 aa14.56□□□□□ -0.08
SS18-226ENST00000585241 RNFT1Q5M7Z0 435 aa14.56□□□□□ -0.08
SS18-226ENST00000585241 C1orf140Q5VVS0 124 aa14.56□□□□□ -0.08
SS18-226ENST00000585241 POMZP3Q6PJE2 187 aa14.56□□□□□ -0.08
SS18-226ENST00000585241 KLHL17Q6TDP4 642 aa14.56□□□□□ -0.08
SS18-226ENST00000585241 LSRQ86X29 649 aaPredicted RBP14.56□□□□□ -0.08
SS18-226ENST00000585241 P3H2Q8IVL5 708 aa14.56□□□□□ -0.08
SS18-226ENST00000585241 CDK20Q8IZL9 346 aa14.56□□□□□ -0.08
SS18-226ENST00000585241 CLDN22Q8N7P3 220 aa14.56□□□□□ -0.08
SS18-226ENST00000585241 OR5M1Q8NGP8 315 aa14.56□□□□□ -0.08
SS18-226ENST00000585241 OR14L1PQ8NHC6 308 aa14.56□□□□□ -0.08
SS18-226ENST00000585241 C9orf43Q8TAL5 461 aaPredicted RBP14.56□□□□□ -0.08
SS18-226ENST00000585241 DDIT4LQ96D03 193 aa14.56□□□□□ -0.08
SS18-226ENST00000585241 KTI12Q96EK9 354 aaPredicted RBP14.56□□□□□ -0.08
SS18-226ENST00000585241 SGTBQ96EQ0 304 aa14.56□□□□□ -0.08
SS18-226ENST00000585241 GABARAPL3Q9BY60 117 aa14.56□□□□□ -0.08
SS18-226ENST00000585241 UCK2Q9BZX2 261 aa14.56□□□□□ -0.08
SS18-226ENST00000585241 ZNF556Q9HAH1 456 aa14.56□□□□□ -0.08
SS18-226ENST00000585241 PAPOLBQ9NRJ5 636 aaKnown RBP14.56□□□□□ -0.08
SS18-226ENST00000585241 KRT84Q9NSB2 600 aa14.56□□□□□ -0.08
SS18-226ENST00000585241 REV1Q9UBZ9 1251 aa14.56□□□□□ -0.08
SS18-226ENST00000585241 ENOPH1Q9UHY7 261 aa14.56□□□□□ -0.08
SS18-226ENST00000585241 LHX6Q9UPM6 363 aa14.56□□□□□ -0.08
SS18-226ENST00000585241 RPH3AQ9Y2J0 694 aaPredicted RBP14.56□□□□□ -0.08
SS18-226ENST00000585241 FREM3P0C091 2139 aa14.56□□□□□ -0.08
SS18-226ENST00000585241 FTCDNL1E5RQL4 147 aa14.55□□□□□ -0.08
SS18-226ENST00000585241 CDC42EP2O14613 210 aa14.55□□□□□ -0.08
SS18-226ENST00000585241 OR2T1O43869 369 aa14.55□□□□□ -0.08
SS18-226ENST00000585241 MITFO75030 526 aaPredicted RBP14.55□□□□□ -0.08
SS18-226ENST00000585241 TRAPPC6AO75865 159 aa14.55□□□□□ -0.08
SS18-226ENST00000585241 OR7A10O76100 309 aa14.55□□□□□ -0.08
SS18-226ENST00000585241 AHSA1O95433 338 aa14.55□□□□□ -0.08
SS18-226ENST00000585241 BGLAPP02818 100 aa14.55□□□□□ -0.08
SS18-226ENST00000585241 TP53P04637 393 aaPredicted RBP14.55□□□□□ -0.08
SS18-226ENST00000585241 CELA3AP09093 270 aa14.55□□□□□ -0.08
SS18-226ENST00000585241 FAM87AP0C7U9 286 aa14.55□□□□□ -0.08
SS18-226ENST00000585241 PTNP21246 168 aa14.55□□□□□ -0.08
SS18-226ENST00000585241 GPR4P46093 362 aa14.55□□□□□ -0.08
SS18-226ENST00000585241 HSPA13P48723 471 aa14.55□□□□□ -0.08
SS18-226ENST00000585241 SLC9A3P48764 834 aa14.55□□□□□ -0.08
SS18-226ENST00000585241 ALDH6A1Q02252 535 aaKnown RBP14.55□□□□□ -0.08
SS18-226ENST00000585241 LTBQ06643 244 aa14.55□□□□□ -0.08
SS18-226ENST00000585241 TOMM20Q15388 145 aa14.55□□□□□ -0.08
SS18-226ENST00000585241 WIPI1Q5MNZ9 446 aaPredicted RBP14.55□□□□□ -0.08
SS18-226ENST00000585241 FAM69AQ5T7M9 428 aa14.55□□□□□ -0.08
SS18-226ENST00000585241 SLC6A19Q695T7 634 aa14.55□□□□□ -0.08
SS18-226ENST00000585241 RASSF6Q6ZTQ3 369 aa14.55□□□□□ -0.08
SS18-226ENST00000585241 GTPBP3Q969Y2 492 aaKnown RBP14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms