RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 B8ZZF3 427 aa12.87□□□□□ -0.35
SKA2-205ENST00000580541 NPIPA2E9PIF3 369 aa12.87□□□□□ -0.35
SKA2-205ENST00000580541 NPIPA3F8WFD2 350 aa12.87□□□□□ -0.35
SKA2-205ENST00000580541 SULT2B1O00204 365 aa12.87□□□□□ -0.35
SKA2-205ENST00000580541 PRRG2O14669 202 aa12.87□□□□□ -0.35
SKA2-205ENST00000580541 DNPH1O43598 174 aa12.87□□□□□ -0.35
SKA2-205ENST00000580541 EIF1BO60739 113 aaKnown RBP12.87□□□□□ -0.35
SKA2-205ENST00000580541 SEMA7AO75326 666 aa12.87□□□□□ -0.35
SKA2-205ENST00000580541 TIPRLO75663 272 aa12.87□□□□□ -0.35
SKA2-205ENST00000580541 MT-ATP6P00846 226 aa12.87□□□□□ -0.35
SKA2-205ENST00000580541 MT-ND1P03886 318 aa12.87□□□□□ -0.35
SKA2-205ENST00000580541 HIST1H2ABP04908 130 aa12.87□□□□□ -0.35
SKA2-205ENST00000580541 ABOP16442 354 aa12.87□□□□□ -0.35
SKA2-205ENST00000580541 ZNF708P17019 499 aa12.87□□□□□ -0.35
SKA2-205ENST00000580541 GTF2E2P29084 291 aaKnown RBP12.87□□□□□ -0.35
SKA2-205ENST00000580541 SFTPDP35247 375 aa12.87□□□□□ -0.35
SKA2-205ENST00000580541 IDUAP35475 653 aa12.87□□□□□ -0.35
SKA2-205ENST00000580541 LHX2P50458 406 aa12.87□□□□□ -0.35
SKA2-205ENST00000580541 MLLT10P55197 1068 aa12.87□□□□□ -0.35
SKA2-205ENST00000580541 NUP107P57740 925 aa12.87□□□□□ -0.35
SKA2-205ENST00000580541 SLC35A1P78382 337 aa12.87□□□□□ -0.35
SKA2-205ENST00000580541 ELF3P78545 371 aaPredicted RBP12.87□□□□□ -0.35
SKA2-205ENST00000580541 CRYZQ08257 329 aaKnown RBP12.87□□□□□ -0.35
SKA2-205ENST00000580541 FOXD4Q12950 439 aaPredicted RBP12.87□□□□□ -0.35
SKA2-205ENST00000580541 ATP6AP1Q15904 470 aa12.87□□□□□ -0.35
SKA2-205ENST00000580541 C1orf140Q5VVS0 124 aa12.87□□□□□ -0.35
SKA2-205ENST00000580541 GTF2IRD2BQ6EKJ0 949 aa12.87□□□□□ -0.35
SKA2-205ENST00000580541 TMPPEQ6ZT21 453 aa12.87□□□□□ -0.35
SKA2-205ENST00000580541 HIST3H2AQ7L7L0 130 aa12.87□□□□□ -0.35
SKA2-205ENST00000580541 TSEN54Q7Z6J9 526 aaKnown RBP12.87□□□□□ -0.35
SKA2-205ENST00000580541 GTF2IRD2Q86UP8 949 aa12.87□□□□□ -0.35
SKA2-205ENST00000580541 ST6GALNAC3Q8NDV1 305 aa12.87□□□□□ -0.35
SKA2-205ENST00000580541 OR52J3Q8NH60 311 aa12.87□□□□□ -0.35
SKA2-205ENST00000580541 MFSD8Q8NHS3 518 aa12.87□□□□□ -0.35
SKA2-205ENST00000580541 HIST1H2ACQ93077 130 aa12.87□□□□□ -0.35
SKA2-205ENST00000580541 SDCCAG3Q96C92 435 aa12.87□□□□□ -0.35
SKA2-205ENST00000580541 OR5B2Q96R09 309 aa12.87□□□□□ -0.35
SKA2-205ENST00000580541 ZNF426Q9BUY5 554 aa12.87□□□□□ -0.35
SKA2-205ENST00000580541 DCLRE1BQ9H816 532 aa12.87□□□□□ -0.35
SKA2-205ENST00000580541 CAMK2AQ9UQM7 478 aa12.87□□□□□ -0.35
SKA2-205ENST00000580541 FIGNL2A6NMB9 653 aa12.86□□□□□ -0.35
SKA2-205ENST00000580541 H0Y3Z8 333 aa12.86□□□□□ -0.35
SKA2-205ENST00000580541 EIF1AYO14602 144 aaKnown RBP12.86□□□□□ -0.35
SKA2-205ENST00000580541 EFNA2O43921 213 aa12.86□□□□□ -0.35
SKA2-205ENST00000580541 CCNB2O95067 398 aa12.86□□□□□ -0.35
SKA2-205ENST00000580541 SYNGR4O95473 234 aa12.86□□□□□ -0.35
SKA2-205ENST00000580541 PMS2P2O95744 297 aa12.86□□□□□ -0.35
SKA2-205ENST00000580541 BAG2O95816 211 aa12.86□□□□□ -0.35
SKA2-205ENST00000580541 STARP49675 285 aa12.86□□□□□ -0.35
SKA2-205ENST00000580541 TDGF1P3P51864 188 aa12.86□□□□□ -0.35
SKA2-205ENST00000580541 RAC3P60763 192 aa12.86□□□□□ -0.35
SKA2-205ENST00000580541 FOXK1P85037 733 aa12.86□□□□□ -0.35
SKA2-205ENST00000580541 SRYQ05066 204 aa12.86□□□□□ -0.35
SKA2-205ENST00000580541 FAM69AQ5T7M9 428 aa12.86□□□□□ -0.35
SKA2-205ENST00000580541 HBMQ6B0K9 141 aa12.86□□□□□ -0.35
SKA2-205ENST00000580541 PODNL1Q6PEZ8 512 aa12.86□□□□□ -0.35
SKA2-205ENST00000580541 MBOAT2Q6ZWT7 520 aa12.86□□□□□ -0.35
SKA2-205ENST00000580541 HIPK1Q86Z02 1210 aa12.86□□□□□ -0.35
SKA2-205ENST00000580541 NKAIN4Q8IVV8 208 aa12.86□□□□□ -0.35
SKA2-205ENST00000580541 UBQLNLQ8IYU4 475 aa12.86□□□□□ -0.35
SKA2-205ENST00000580541 SVOPLQ8N434 492 aa12.86□□□□□ -0.35
SKA2-205ENST00000580541 C10orf53Q8N6V4 93 aa12.86□□□□□ -0.35
SKA2-205ENST00000580541 OR2V1Q8NHB1 315 aa12.86□□□□□ -0.35
SKA2-205ENST00000580541 PIGXQ8TBF5 258 aa12.86□□□□□ -0.35
SKA2-205ENST00000580541 SLC7A13Q8TCU3 470 aa12.86□□□□□ -0.35
SKA2-205ENST00000580541 ZPLD1Q8TCW7 415 aa12.86□□□□□ -0.35
SKA2-205ENST00000580541 OSTF1Q92882 214 aa12.86□□□□□ -0.35
SKA2-205ENST00000580541 CPNE4Q96A23 557 aaPredicted RBP12.86□□□□□ -0.35
SKA2-205ENST00000580541 ZNF524Q96C55 264 aa12.86□□□□□ -0.35
SKA2-205ENST00000580541 WDYHV1Q96HA8 205 aa12.86□□□□□ -0.35
SKA2-205ENST00000580541 PRSS27Q9BQR3 290 aa12.86□□□□□ -0.35
SKA2-205ENST00000580541 NAA11Q9BSU3 229 aaPredicted RBP12.86□□□□□ -0.35
SKA2-205ENST00000580541 OSBPL10Q9BXB5 764 aa12.86□□□□□ -0.35
SKA2-205ENST00000580541 PRDM14Q9GZV8 571 aa12.86□□□□□ -0.35
SKA2-205ENST00000580541 TMEM185BQ9H7F4 350 aa12.86□□□□□ -0.35
SKA2-205ENST00000580541 C6orf203Q9P0P8 240 aaPredicted RBP12.86□□□□□ -0.35
SKA2-205ENST00000580541 LIPGQ9Y5X9 500 aa12.86□□□□□ -0.35
SKA2-205ENST00000580541 LYVE1Q9Y5Y7 322 aa12.86□□□□□ -0.35
SKA2-205ENST00000580541 ZGRF1Q86YA3 2104 aa12.86□□□□□ -0.35
SKA2-205ENST00000580541 ATRXP46100 2492 aa12.85□□□□□ -0.35
SKA2-205ENST00000580541 A0A087WUU8 490 aa12.85□□□□□ -0.35
SKA2-205ENST00000580541 SH3PXD2BA1X283 911 aa12.85□□□□□ -0.35
SKA2-205ENST00000580541 SEC14L5O43304 696 aa12.85□□□□□ -0.35
SKA2-205ENST00000580541 OR10H3O60404 316 aa12.85□□□□□ -0.35
SKA2-205ENST00000580541 WDR1O75083 606 aa12.85□□□□□ -0.35
SKA2-205ENST00000580541 NPIPB7O75200 414 aa12.85□□□□□ -0.35
SKA2-205ENST00000580541 LYPD3O95274 346 aa12.85□□□□□ -0.35
SKA2-205ENST00000580541 THY1P04216 161 aa12.85□□□□□ -0.35
SKA2-205ENST00000580541 FPR1P21462 350 aa12.85□□□□□ -0.35
SKA2-205ENST00000580541 EIF1AXP47813 144 aaKnown RBP12.85□□□□□ -0.35
SKA2-205ENST00000580541 CLDN18P56856 261 aa12.85□□□□□ -0.35
SKA2-205ENST00000580541 OR2B6P58173 313 aa12.85□□□□□ -0.35
SKA2-205ENST00000580541 PRKCDQ05655 676 aa12.85□□□□□ -0.35
SKA2-205ENST00000580541 MYBPHQ13203 477 aa12.85□□□□□ -0.35
SKA2-205ENST00000580541 MICAQ29983 383 aa12.85□□□□□ -0.35
SKA2-205ENST00000580541 ANKDD1AQ495B1 522 aa12.85□□□□□ -0.35
SKA2-205ENST00000580541 GXYLT1Q4G148 440 aa12.85□□□□□ -0.35
SKA2-205ENST00000580541 MAMDC2Q7Z304 686 aaPredicted RBP12.85□□□□□ -0.35
SKA2-205ENST00000580541 TSPYL5Q86VY4 417 aaPredicted RBP12.85□□□□□ -0.35
SKA2-205ENST00000580541 ZDHHC13Q8IUH4 622 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms