RNA–Protein interactions for RNA: ENST00000580108.1

DDX42-211, Transcript of DEAD-box helicase 42, humanhuman

TSL 3

Gene DDX42, Length 545 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-211ENST00000580108 ZNF117Q03924 483 aa3.55□□□□□ -1.84
DDX42-211ENST00000580108 FAM27E3Q08E93 113 aa3.55□□□□□ -1.84
DDX42-211ENST00000580108 FOXF1Q12946 379 aa3.55□□□□□ -1.84
DDX42-211ENST00000580108 EFR3AQ14156 821 aa3.55□□□□□ -1.84
DDX42-211ENST00000580108 RCAN2Q14206 197 aa3.55□□□□□ -1.84
DDX42-211ENST00000580108 TSC22D1Q15714 1073 aa3.55□□□□□ -1.84
DDX42-211ENST00000580108 TOMM34Q15785 309 aaPredicted RBP3.55□□□□□ -1.84
DDX42-211ENST00000580108 HSPB2Q16082 182 aa3.55□□□□□ -1.84
DDX42-211ENST00000580108 DECR1Q16698 335 aa3.55□□□□□ -1.84
DDX42-211ENST00000580108 TMEM44Q2T9K0 475 aa3.55□□□□□ -1.84
DDX42-211ENST00000580108 PGS1Q32NB8 556 aa3.55□□□□□ -1.84
DDX42-211ENST00000580108 FLYWCH1Q4VC44 716 aa3.55□□□□□ -1.84
DDX42-211ENST00000580108 NHSL2Q5HYW2 709 aa3.55□□□□□ -1.84
DDX42-211ENST00000580108 C6orf136Q5SQH8 315 aa3.55□□□□□ -1.84
DDX42-211ENST00000580108 CEP85LQ5SZL2 805 aa3.55□□□□□ -1.84
DDX42-211ENST00000580108 OR4F3Q6IEY1 312 aa3.55□□□□□ -1.84
DDX42-211ENST00000580108 MFSD12Q6NUT3 480 aa3.55□□□□□ -1.84
DDX42-211ENST00000580108 CDC73Q6P1J9 531 aa3.55□□□□□ -1.84
DDX42-211ENST00000580108 TMEM81Q6P7N7 255 aa3.55□□□□□ -1.84
DDX42-211ENST00000580108 ZNF474Q6S9Z5 364 aaPredicted RBP3.55□□□□□ -1.84
DDX42-211ENST00000580108 CBLN3Q6UW01 205 aa3.55□□□□□ -1.84
DDX42-211ENST00000580108 P4HA3Q7Z4N8 544 aa3.55□□□□□ -1.84
DDX42-211ENST00000580108 PEG10Q86TG7 708 aaKnown RBP3.55□□□□□ -1.84
DDX42-211ENST00000580108 ANKRD46Q86W74 232 aa3.55□□□□□ -1.84
DDX42-211ENST00000580108 NUDCD3Q8IVD9 361 aa3.55□□□□□ -1.84
DDX42-211ENST00000580108 DND1Q8IYX4 353 aaKnown RBP3.55□□□□□ -1.84
DDX42-211ENST00000580108 CLYBLQ8N0X4 340 aa3.55□□□□□ -1.84
DDX42-211ENST00000580108 EID3Q8N140 333 aa3.55□□□□□ -1.84
DDX42-211ENST00000580108 CNEP1R1Q8N9A8 125 aa3.55□□□□□ -1.84
DDX42-211ENST00000580108 EIF1ADQ8N9N8 165 aaKnown RBP3.55□□□□□ -1.84
DDX42-211ENST00000580108 FNDC5Q8NAU1 212 aa3.55□□□□□ -1.84
DDX42-211ENST00000580108 ATP6V1C2Q8NEY4 427 aa3.55□□□□□ -1.84
DDX42-211ENST00000580108 RFWD2Q8NHY2 731 aa3.55□□□□□ -1.84
DDX42-211ENST00000580108 MBD3L2Q8NHZ7 208 aaPredicted RBP3.55□□□□□ -1.84
DDX42-211ENST00000580108 FNDC9Q8TBE3 224 aa3.55□□□□□ -1.84
DDX42-211ENST00000580108 ZPLD1Q8TCW7 415 aa3.55□□□□□ -1.84
DDX42-211ENST00000580108 MGARPQ8TDB4 240 aa3.55□□□□□ -1.84
DDX42-211ENST00000580108 RAB8BQ92930 207 aa3.55□□□□□ -1.84
DDX42-211ENST00000580108 TMCO6Q96DC7 493 aa3.55□□□□□ -1.84
DDX42-211ENST00000580108 STARD4Q96DR4 205 aa3.55□□□□□ -1.84
DDX42-211ENST00000580108 CCDC126Q96EE4 140 aa3.55□□□□□ -1.84
DDX42-211ENST00000580108 C1GALT1C1Q96EU7 318 aa3.55□□□□□ -1.84
DDX42-211ENST00000580108 ZC3HAV1LQ96H79 300 aaKnown RBP3.55□□□□□ -1.84
DDX42-211ENST00000580108 TEX37Q96LM6 180 aa3.55□□□□□ -1.84
DDX42-211ENST00000580108 RNF145Q96MT1 663 aa3.55□□□□□ -1.84
DDX42-211ENST00000580108 SORT1Q99523 831 aa3.55□□□□□ -1.84
DDX42-211ENST00000580108 CCT7Q99832 543 aa3.55□□□□□ -1.84
DDX42-211ENST00000580108 PAIP2Q9BPZ3 127 aaKnown RBP3.55□□□□□ -1.84
DDX42-211ENST00000580108 RBM24Q9BX46 236 aaKnown RBP3.55□□□□□ -1.84
DDX42-211ENST00000580108 PINK1Q9BXM7 581 aa3.55□□□□□ -1.84
DDX42-211ENST00000580108 POLDIP3Q9BY77 421 aaKnown RBP3.55□□□□□ -1.84
DDX42-211ENST00000580108 SRXN1Q9BYN0 137 aa3.55□□□□□ -1.84
DDX42-211ENST00000580108 IQCGQ9H095 443 aaKnown RBP3.55□□□□□ -1.84
DDX42-211ENST00000580108 ZCCHC3Q9NUD5 404 aaKnown RBP3.55□□□□□ -1.84
DDX42-211ENST00000580108 MED17Q9NVC6 651 aa3.55□□□□□ -1.84
DDX42-211ENST00000580108 FAM120CQ9NX05 1096 aaKnown RBP3.55□□□□□ -1.84
DDX42-211ENST00000580108 TAS2R9Q9NYW1 312 aa3.55□□□□□ -1.84
DDX42-211ENST00000580108 TAS2R7Q9NYW3 318 aa3.55□□□□□ -1.84
DDX42-211ENST00000580108 C6orf203Q9P0P8 240 aaPredicted RBP3.55□□□□□ -1.84
DDX42-211ENST00000580108 MARCOQ9UEW3 520 aaPredicted RBP3.55□□□□□ -1.84
DDX42-211ENST00000580108 KCNN3Q9UGI6 736 aa3.55□□□□□ -1.84
DDX42-211ENST00000580108 ATP6V1HQ9UI12 483 aa3.55□□□□□ -1.84
DDX42-211ENST00000580108 CARD8Q9Y2G2 431 aa3.55□□□□□ -1.84
DDX42-211ENST00000580108 TRGV11A0A075B6L2 103 aa3.54□□□□□ -1.84
DDX42-211ENST00000580108 IGLV3-32A0A0A0MS00 114 aa3.54□□□□□ -1.84
DDX42-211ENST00000580108 SLC22A20A6NK97 555 aa3.54□□□□□ -1.84
DDX42-211ENST00000580108 CLDN24A6NM45 220 aa3.54□□□□□ -1.84
DDX42-211ENST00000580108 SYT5O00445 386 aa3.54□□□□□ -1.84
DDX42-211ENST00000580108 SDHDO14521 159 aa3.54□□□□□ -1.84
DDX42-211ENST00000580108 TNFSF11O14788 317 aa3.54□□□□□ -1.84
DDX42-211ENST00000580108 ANKRD28O15084 1053 aa3.54□□□□□ -1.84
DDX42-211ENST00000580108 RGS16O15492 202 aaPredicted RBP3.54□□□□□ -1.84
DDX42-211ENST00000580108 CFLARO15519 480 aa3.54□□□□□ -1.84
DDX42-211ENST00000580108 CTIFO43310 598 aaKnown RBP3.54□□□□□ -1.84
DDX42-211ENST00000580108 HCRTR2O43614 444 aa3.54□□□□□ -1.84
DDX42-211ENST00000580108 ZNF500O60304 480 aaPredicted RBP3.54□□□□□ -1.84
DDX42-211ENST00000580108 TBX19O60806 448 aa3.54□□□□□ -1.84
DDX42-211ENST00000580108 BCAS2O75934 225 aaPredicted RBP3.54□□□□□ -1.84
DDX42-211ENST00000580108 RCBTB2O95199 551 aa3.54□□□□□ -1.84
DDX42-211ENST00000580108 CPSF4O95639 269 aaKnown RBP3.54□□□□□ -1.84
DDX42-211ENST00000580108 HSPA4LO95757 839 aa3.54□□□□□ -1.84
DDX42-211ENST00000580108 CHEK2O96017 543 aa3.54□□□□□ -1.84
DDX42-211ENST00000580108 PLAUP00749 431 aa3.54□□□□□ -1.84
DDX42-211ENST00000580108 FGF4P08620 206 aa3.54□□□□□ -1.84
DDX42-211ENST00000580108 ALOX5P09917 674 aa3.54□□□□□ -1.84
DDX42-211ENST00000580108 ALDOCP09972 364 aaKnown RBP3.54□□□□□ -1.84
DDX42-211ENST00000580108 DHRS4L1P0CG22 281 aa3.54□□□□□ -1.84
DDX42-211ENST00000580108 KITP10721 976 aa3.54□□□□□ -1.84
DDX42-211ENST00000580108 NEFHP12036 1026 aa3.54□□□□□ -1.84
DDX42-211ENST00000580108 DDX5P17844 614 aaKnown RBP3.54□□□□□ -1.84
DDX42-211ENST00000580108 CHMP24386 653 aa3.54□□□□□ -1.84
DDX42-211ENST00000580108 PSMA4P25789 261 aaKnown RBP3.54□□□□□ -1.84
DDX42-211ENST00000580108 SFTPDP35247 375 aa3.54□□□□□ -1.84
DDX42-211ENST00000580108 HPCAL1P37235 193 aa3.54□□□□□ -1.84
DDX42-211ENST00000580108 CDKN2CP42773 168 aa3.54□□□□□ -1.84
DDX42-211ENST00000580108 CPA2P48052 419 aa3.54□□□□□ -1.84
DDX42-211ENST00000580108 SLC1A6P48664 564 aa3.54□□□□□ -1.84
DDX42-211ENST00000580108 CCT3P49368 545 aaKnown RBP3.54□□□□□ -1.84
DDX42-211ENST00000580108 DSCR4P56555 118 aaPredicted RBP3.54□□□□□ -1.84
DDX42-211ENST00000580108 SCAND1P57086 179 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms