RNA–Protein interactions for RNA: ENST00000578172.1

NDEL1-204, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

Gene NDEL1, Length 3,927 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-204ENST00000578172 GBX2P52951 348 aaPredicted RBP12.62□□□□□ -0.39
NDEL1-204ENST00000578172 EIPR1Q53HC9 387 aa12.62□□□□□ -0.39
NDEL1-204ENST00000578172 FCRLAQ7L513 359 aa12.62□□□□□ -0.39
NDEL1-204ENST00000578172 NR2C2APQ86WQ0 139 aa12.62□□□□□ -0.39
NDEL1-204ENST00000578172 OR2T35Q8NGX2 323 aa12.62□□□□□ -0.39
NDEL1-204ENST00000578172 SETD6Q8TBK2 473 aa12.62□□□□□ -0.39
NDEL1-204ENST00000578172 C1QTNF6Q9BXI9 259 aa12.62□□□□□ -0.39
NDEL1-204ENST00000578172 PHF11Q9UIL8 331 aa12.62□□□□□ -0.39
NDEL1-204ENST00000578172 A0A0A6YYJ9 748 aa12.61□□□□□ -0.39
NDEL1-204ENST00000578172 TRDV1A0A1B0GX56 115 aa12.61□□□□□ -0.39
NDEL1-204ENST00000578172 TMEM129A0AVI4 362 aa12.61□□□□□ -0.39
NDEL1-204ENST00000578172 ZGLP1P0C6A0 271 aa12.61□□□□□ -0.39
NDEL1-204ENST00000578172 FPR3P25089 353 aa12.61□□□□□ -0.39
NDEL1-204ENST00000578172 GLYR1Q49A26 553 aaPredicted RBP12.61□□□□□ -0.39
NDEL1-204ENST00000578172 GARNL3Q5VVW2 1013 aa12.61□□□□□ -0.39
NDEL1-204ENST00000578172 SLC35D2Q76EJ3 337 aa12.61□□□□□ -0.39
NDEL1-204ENST00000578172 TMPRSS9Q7Z410 1059 aa12.61□□□□□ -0.39
NDEL1-204ENST00000578172 TMPRSS12Q86WS5 348 aa12.61□□□□□ -0.39
NDEL1-204ENST00000578172 MFSD9Q8NBP5 474 aa12.61□□□□□ -0.39
NDEL1-204ENST00000578172 CEP76Q8TAP6 659 aa12.61□□□□□ -0.39
NDEL1-204ENST00000578172 GAL3ST3Q96A11 431 aa12.61□□□□□ -0.39
NDEL1-204ENST00000578172 C19orf43Q9BQ61 176 aa12.61□□□□□ -0.39
NDEL1-204ENST00000578172 DPAGT1Q9H3H5 408 aa12.61□□□□□ -0.39
NDEL1-204ENST00000578172 ZDBF2Q9HCK1 2354 aa12.61□□□□□ -0.39
NDEL1-204ENST00000578172 TMEM72A0PK05 275 aa12.61□□□□□ -0.39
NDEL1-204ENST00000578172 ELOA3DA6NLF2 546 aaPredicted RBP12.61□□□□□ -0.39
NDEL1-204ENST00000578172 ADH1BP00325 375 aa12.61□□□□□ -0.39
NDEL1-204ENST00000578172 C4BPBP20851 252 aa12.61□□□□□ -0.39
NDEL1-204ENST00000578172 AQP2P41181 271 aa12.61□□□□□ -0.39
NDEL1-204ENST00000578172 TSPAN5P62079 268 aa12.61□□□□□ -0.39
NDEL1-204ENST00000578172 HSF2Q03933 536 aa12.61□□□□□ -0.39
NDEL1-204ENST00000578172 GAS6Q14393 721 aa12.61□□□□□ -0.39
NDEL1-204ENST00000578172 ELOA3BQ3SY89 546 aa12.61□□□□□ -0.39
NDEL1-204ENST00000578172 AADACL4Q5VUY2 407 aa12.61□□□□□ -0.39
NDEL1-204ENST00000578172 NIPAL3Q6P499 406 aa12.61□□□□□ -0.39
NDEL1-204ENST00000578172 ZNF676Q8N7Q3 588 aa12.61□□□□□ -0.39
NDEL1-204ENST00000578172 ELOA3Q8NG57 546 aa12.61□□□□□ -0.39
NDEL1-204ENST00000578172 PTP4A1Q93096 173 aa12.61□□□□□ -0.39
NDEL1-204ENST00000578172 Q96M85 177 aa12.61□□□□□ -0.39
NDEL1-204ENST00000578172 TGM7Q96PF1 710 aa12.61□□□□□ -0.39
NDEL1-204ENST00000578172 HDAC8Q9BY41 377 aa12.61□□□□□ -0.39
NDEL1-204ENST00000578172 SLA2Q9H6Q3 261 aa12.61□□□□□ -0.39
NDEL1-204ENST00000578172 REV3LO60673 3130 aa12.61□□□□□ -0.39
NDEL1-204ENST00000578172 SIX6O95475 246 aa12.61□□□□□ -0.39
NDEL1-204ENST00000578172 DNASE1P24855 282 aa12.61□□□□□ -0.39
NDEL1-204ENST00000578172 STOMP27105 288 aa12.61□□□□□ -0.39
NDEL1-204ENST00000578172 RPS15AP62244 130 aaKnown RBP12.61□□□□□ -0.39
NDEL1-204ENST00000578172 ASAH1Q13510 395 aa12.61□□□□□ -0.39
NDEL1-204ENST00000578172 ATXN7L3Q14CW9 347 aaPredicted RBP12.61□□□□□ -0.39
NDEL1-204ENST00000578172 FAM209AQ5JX71 171 aa12.61□□□□□ -0.39
NDEL1-204ENST00000578172 JAZF1Q86VZ6 243 aa12.61□□□□□ -0.39
NDEL1-204ENST00000578172 OR13H1Q8NG92 308 aa12.61□□□□□ -0.39
NDEL1-204ENST00000578172 TSEN15Q8WW01 171 aaKnown RBP12.61□□□□□ -0.39
NDEL1-204ENST00000578172 POT1Q9NUX5 634 aa12.61□□□□□ -0.39
NDEL1-204ENST00000578172 CACNG2Q9Y698 323 aa12.61□□□□□ -0.39
NDEL1-204ENST00000578172 OR6A2O95222 327 aa12.6□□□□□ -0.39
NDEL1-204ENST00000578172 CXCL3P19876 107 aa12.6□□□□□ -0.39
NDEL1-204ENST00000578172 DDOSTP39656 456 aa12.6□□□□□ -0.39
NDEL1-204ENST00000578172 OR1D4P47884 311 aa12.6□□□□□ -0.39
NDEL1-204ENST00000578172 RRAS2P62070 204 aaPredicted RBP12.6□□□□□ -0.39
NDEL1-204ENST00000578172 LRRC37A5PQ49AS3 106 aa12.6□□□□□ -0.39
NDEL1-204ENST00000578172 HSD17B12Q53GQ0 312 aa12.6□□□□□ -0.39
NDEL1-204ENST00000578172 C1orf189Q5VU69 101 aa12.6□□□□□ -0.39
NDEL1-204ENST00000578172 COMMD7Q86VX2 200 aa12.6□□□□□ -0.39
NDEL1-204ENST00000578172 GJD3Q8N144 294 aa12.6□□□□□ -0.39
NDEL1-204ENST00000578172 SEC22CQ9BRL7 303 aa12.6□□□□□ -0.39
NDEL1-204ENST00000578172 TMEM43Q9BTV4 400 aa12.6□□□□□ -0.39
NDEL1-204ENST00000578172 TEX101Q9BY14 249 aa12.6□□□□□ -0.39
NDEL1-204ENST00000578172 NKX2-4Q9H2Z4 354 aa12.6□□□□□ -0.39
NDEL1-204ENST00000578172 FAM60AQ9NP50 221 aa12.6□□□□□ -0.39
NDEL1-204ENST00000578172 MKKSQ9NPJ1 570 aaPredicted RBP12.6□□□□□ -0.39
NDEL1-204ENST00000578172 LYARQ9NX58 379 aaKnown RBP12.6□□□□□ -0.39
NDEL1-204ENST00000578172 SLC23A1Q9UHI7 598 aa12.6□□□□□ -0.39
NDEL1-204ENST00000578172 PFDN2Q9UHV9 154 aa12.6□□□□□ -0.39
NDEL1-204ENST00000578172 PLXNB3Q9ULL4 1909 aa12.6□□□□□ -0.39
NDEL1-204ENST00000578172 MPDZO75970 2070 aa12.6□□□□□ -0.39
NDEL1-204ENST00000578172 MCIDASD6RGH6 385 aa12.6□□□□□ -0.39
NDEL1-204ENST00000578172 CDC40O60508 579 aaKnown RBP eCLIP12.6□□□□□ -0.39
NDEL1-204ENST00000578172 IFNA7P01567 189 aa12.6□□□□□ -0.39
NDEL1-204ENST00000578172 SBK2P0C263 348 aa12.6□□□□□ -0.39
NDEL1-204ENST00000578172 F8A1P23610 371 aa12.6□□□□□ -0.39
NDEL1-204ENST00000578172 RASGRP3Q8IV61 690 aa12.6□□□□□ -0.39
NDEL1-204ENST00000578172 GID4Q8IVV7 300 aa12.6□□□□□ -0.39
NDEL1-204ENST00000578172 ZNF527Q8NB42 609 aa12.6□□□□□ -0.39
NDEL1-204ENST00000578172 HSD17B8Q92506 261 aa12.6□□□□□ -0.39
NDEL1-204ENST00000578172 KCNK15Q9H427 330 aa12.6□□□□□ -0.39
NDEL1-204ENST00000578172 TCF7L1Q9HCS4 588 aa12.6□□□□□ -0.39
NDEL1-204ENST00000578172 NOX4Q9NPH5 578 aa12.6□□□□□ -0.39
NDEL1-204ENST00000578172 KCNE5Q9UJ90 142 aa12.6□□□□□ -0.39
NDEL1-204ENST00000578172 FXYD6-FXYD2A0A087WZ82 144 aa12.6□□□□□ -0.39
NDEL1-204ENST00000578172 CIB4A0PJX0 185 aa12.6□□□□□ -0.39
NDEL1-204ENST00000578172 SLC22A31A6NKX4 558 aa12.6□□□□□ -0.39
NDEL1-204ENST00000578172 DBIP07108 87 aaKnown RBP12.6□□□□□ -0.39
NDEL1-204ENST00000578172 ST6GAL1P15907 406 aa12.6□□□□□ -0.39
NDEL1-204ENST00000578172 STARP49675 285 aa12.6□□□□□ -0.39
NDEL1-204ENST00000578172 FAM53BQ14153 422 aa12.6□□□□□ -0.39
NDEL1-204ENST00000578172 TMEM201Q5SNT2 666 aa12.6□□□□□ -0.39
NDEL1-204ENST00000578172 TMED4Q7Z7H5 227 aa12.6□□□□□ -0.39
NDEL1-204ENST00000578172 ZPLD1Q8TCW7 415 aa12.6□□□□□ -0.39
NDEL1-204ENST00000578172 FXYD6Q9H0Q3 95 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms