RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 IL1RAPQ9NPH3 570 aa15.04■□□□□ -0
COMMD4-224ENST00000568877 PAQR5Q9NXK6 330 aaPredicted RBP15.04■□□□□ -0
COMMD4-224ENST00000568877 HDGFL3Q9Y3E1 203 aa15.04■□□□□ -0
COMMD4-224ENST00000568877 FAM32AQ9Y421 112 aaKnown RBP15.04■□□□□ -0
COMMD4-224ENST00000568877 CLCA1A8K7I4 914 aa15.03■□□□□ -0
COMMD4-224ENST00000568877 FFAR1O14842 300 aa15.03■□□□□ -0
COMMD4-224ENST00000568877 CXCL13O43927 109 aa15.03■□□□□ -0
COMMD4-224ENST00000568877 NPIPB7O75200 414 aa15.03■□□□□ -0
COMMD4-224ENST00000568877 PRSS23O95084 383 aa15.03■□□□□ -0
COMMD4-224ENST00000568877 UMPSP11172 480 aa15.03■□□□□ -0
COMMD4-224ENST00000568877 RHCEP18577 417 aa15.03■□□□□ -0
COMMD4-224ENST00000568877 CHRNB3Q05901 458 aa15.03■□□□□ -0
COMMD4-224ENST00000568877 ST3GAL3Q11203 375 aa15.03■□□□□ -0
COMMD4-224ENST00000568877 MYBPHQ13203 477 aa15.03■□□□□ -0
COMMD4-224ENST00000568877 IQCCQ4KMZ1 466 aa15.03■□□□□ -0
COMMD4-224ENST00000568877 FAM98BQ52LJ0 330 aaKnown RBP15.03■□□□□ -0
COMMD4-224ENST00000568877 C1orf146Q5VVC0 180 aa15.03■□□□□ -0
COMMD4-224ENST00000568877 WDR88Q6ZMY6 472 aa15.03■□□□□ -0
COMMD4-224ENST00000568877 TMPPEQ6ZT21 453 aa15.03■□□□□ -0
COMMD4-224ENST00000568877 ADGRE4PQ86SQ3 457 aa15.03■□□□□ -0
COMMD4-224ENST00000568877 ADGRG5Q8IZF4 528 aa15.03■□□□□ -0
COMMD4-224ENST00000568877 OFCC1Q8IZS5 231 aa15.03■□□□□ -0
COMMD4-224ENST00000568877 ZNF845Q96IR2 970 aaPredicted RBP15.03■□□□□ -0
COMMD4-224ENST00000568877 UCN2Q96RP3 112 aa15.03■□□□□ -0
COMMD4-224ENST00000568877 TRIB1Q96RU8 372 aa15.03■□□□□ -0
COMMD4-224ENST00000568877 PRSS27Q9BQR3 290 aa15.03■□□□□ -0
COMMD4-224ENST00000568877 FNDC11Q9BVV2 318 aa15.03■□□□□ -0
COMMD4-224ENST00000568877 CALHM2Q9HA72 323 aa15.03■□□□□ -0
COMMD4-224ENST00000568877 TIGARQ9NQ88 270 aa15.03■□□□□ -0
COMMD4-224ENST00000568877 RHCGQ9UBD6 479 aa15.03■□□□□ -0
COMMD4-224ENST00000568877 FAM215AQ9Y5M1 114 aa15.03■□□□□ -0
COMMD4-224ENST00000568877 ZNF462Q96JM2 2506 aa15.03■□□□□ -0
COMMD4-224ENST00000568877 IGKV1D-42A0A075B6H8 117 aa15.02■□□□□ -0
COMMD4-224ENST00000568877 A0A1B0GUH1 482 aa15.02■□□□□ -0
COMMD4-224ENST00000568877 TCRBV3S1A0A5B6 114 aa15.02■□□□□ -0
COMMD4-224ENST00000568877 DHRS12A0PJE2 317 aa15.02■□□□□ -0
COMMD4-224ENST00000568877 CD8B2A6NJW9 211 aa15.02■□□□□ -0
COMMD4-224ENST00000568877 E9PLN8 166 aa15.02■□□□□ -0
COMMD4-224ENST00000568877 J3QKU1 62 aa15.02■□□□□ -0
COMMD4-224ENST00000568877 SULT2B1O00204 365 aa15.02■□□□□ -0
COMMD4-224ENST00000568877 CCL21O00585 134 aa15.02■□□□□ -0
COMMD4-224ENST00000568877 GPIP06744 558 aa15.02■□□□□ -0
COMMD4-224ENST00000568877 DIO1P49895 249 aa15.02■□□□□ -0
COMMD4-224ENST00000568877 EGR4Q05215 589 aa15.02■□□□□ -0
COMMD4-224ENST00000568877 C4orf17Q53FE4 359 aa15.02■□□□□ -0
COMMD4-224ENST00000568877 C1orf140Q5VVS0 124 aa15.02■□□□□ -0
COMMD4-224ENST00000568877 NSUN5P2Q63ZY6 315 aa15.02■□□□□ -0
COMMD4-224ENST00000568877 TTC33Q6PID6 262 aaPredicted RBP15.02■□□□□ -0
COMMD4-224ENST00000568877 C5orf46Q6UWT4 87 aa15.02■□□□□ -0
COMMD4-224ENST00000568877 RPTNQ6XPR3 784 aa15.02■□□□□ -0
COMMD4-224ENST00000568877 B3GNT6Q6ZMB0 384 aa15.02■□□□□ -0
COMMD4-224ENST00000568877 PIWIL3Q7Z3Z3 882 aaKnown RBP15.02■□□□□ -0
COMMD4-224ENST00000568877 ZDHHC21Q8IVQ6 265 aa15.02■□□□□ -0
COMMD4-224ENST00000568877 NKAIN4Q8IVV8 208 aa15.02■□□□□ -0
COMMD4-224ENST00000568877 RPRMLQ8N4K4 120 aa15.02■□□□□ -0
COMMD4-224ENST00000568877 CANT1Q8WVQ1 401 aa15.02■□□□□ -0
COMMD4-224ENST00000568877 DNAJA3Q96EY1 480 aa15.02■□□□□ -0
COMMD4-224ENST00000568877 VKORC1Q9BQB6 163 aa15.02■□□□□ -0
COMMD4-224ENST00000568877 TMEM43Q9BTV4 400 aa15.02■□□□□ -0
COMMD4-224ENST00000568877 ZNF426Q9BUY5 554 aa15.02■□□□□ -0
COMMD4-224ENST00000568877 TRAPPC4Q9Y296 219 aa15.02■□□□□ -0
COMMD4-224ENST00000568877 MEMO1Q9Y316 297 aa15.02■□□□□ -0
COMMD4-224ENST00000568877 DNAJC13O75165 2243 aa15.01□□□□□ -0.01
COMMD4-224ENST00000568877 SVILO95425 2214 aa15.01□□□□□ -0.01
COMMD4-224ENST00000568877 MED12Q93074 2177 aa15.01□□□□□ -0.01
COMMD4-224ENST00000568877 KDM4EB2RXH2 506 aaPredicted RBP15.01□□□□□ -0.01
COMMD4-224ENST00000568877 LRRTM2O43300 516 aa15.01□□□□□ -0.01
COMMD4-224ENST00000568877 DIRAS1O95057 198 aa15.01□□□□□ -0.01
COMMD4-224ENST00000568877 PMS2P2O95744 297 aa15.01□□□□□ -0.01
COMMD4-224ENST00000568877 RAP2AP10114 183 aa15.01□□□□□ -0.01
COMMD4-224ENST00000568877 IMPDH2P12268 514 aa15.01□□□□□ -0.01
COMMD4-224ENST00000568877 FUT4P22083 530 aa15.01□□□□□ -0.01
COMMD4-224ENST00000568877 IDUAP35475 653 aa15.01□□□□□ -0.01
COMMD4-224ENST00000568877 MAGEA2P43356 314 aa15.01□□□□□ -0.01
COMMD4-224ENST00000568877 ERFP50548 548 aa15.01□□□□□ -0.01
COMMD4-224ENST00000568877 RAC3P60763 192 aa15.01□□□□□ -0.01
COMMD4-224ENST00000568877 CSNK2A1P68400 391 aaPredicted RBP15.01□□□□□ -0.01
COMMD4-224ENST00000568877 FOXD4Q12950 439 aaPredicted RBP15.01□□□□□ -0.01
COMMD4-224ENST00000568877 TRAM2Q15035 370 aa15.01□□□□□ -0.01
COMMD4-224ENST00000568877 PON3Q15166 354 aa15.01□□□□□ -0.01
COMMD4-224ENST00000568877 TMEM211Q6ICI0 200 aa15.01□□□□□ -0.01
COMMD4-224ENST00000568877 PLXDC2Q6UX71 529 aa15.01□□□□□ -0.01
COMMD4-224ENST00000568877 P3H2Q8IVL5 708 aa15.01□□□□□ -0.01
COMMD4-224ENST00000568877 PIK3C3Q8NEB9 887 aa15.01□□□□□ -0.01
COMMD4-224ENST00000568877 CPNE4Q96A23 557 aaPredicted RBP15.01□□□□□ -0.01
COMMD4-224ENST00000568877 KTI12Q96EK9 354 aaPredicted RBP15.01□□□□□ -0.01
COMMD4-224ENST00000568877 RAB3IPQ96QF0 476 aaPredicted RBP15.01□□□□□ -0.01
COMMD4-224ENST00000568877 DMRTA2Q96SC8 542 aa15.01□□□□□ -0.01
COMMD4-224ENST00000568877 ZNF347Q96SE7 839 aa15.01□□□□□ -0.01
COMMD4-224ENST00000568877 EPYCQ99645 322 aa15.01□□□□□ -0.01
COMMD4-224ENST00000568877 PIP5K1AQ99755 562 aa15.01□□□□□ -0.01
COMMD4-224ENST00000568877 TTYH2Q9BSA4 534 aa15.01□□□□□ -0.01
COMMD4-224ENST00000568877 SRXN1Q9BYN0 137 aa15.01□□□□□ -0.01
COMMD4-224ENST00000568877 NMNAT1Q9HAN9 279 aaPredicted RBP15.01□□□□□ -0.01
COMMD4-224ENST00000568877 CLCF1Q9UBD9 225 aa15.01□□□□□ -0.01
COMMD4-224ENST00000568877 MCTS1Q9ULC4 181 aaKnown RBP15.01□□□□□ -0.01
COMMD4-224ENST00000568877 AURKCQ9UQB9 309 aa15.01□□□□□ -0.01
COMMD4-224ENST00000568877 ZNF175Q9Y473 711 aa15.01□□□□□ -0.01
COMMD4-224ENST00000568877 TRAV36DV7A0A075B6V5 113 aa15□□□□□ -0.01
COMMD4-224ENST00000568877 SLC22A20A6NK97 555 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms