RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 PAGE2Q7Z2X7 111 aa4.14□□□□□ -1.75
SMG1-206ENST00000562668 RAB43Q86YS6 212 aa4.14□□□□□ -1.75
SMG1-206ENST00000562668 ZNF441Q8N8Z8 693 aa4.14□□□□□ -1.75
SMG1-206ENST00000562668 FDCSPQ8NFU4 85 aa4.14□□□□□ -1.75
SMG1-206ENST00000562668 ZNF721Q8TF20 911 aa4.14□□□□□ -1.75
SMG1-206ENST00000562668 TANKQ92844 425 aa4.14□□□□□ -1.75
SMG1-206ENST00000562668 CATSPER2Q96P56 530 aa4.14□□□□□ -1.75
SMG1-206ENST00000562668 IP6K3Q96PC2 410 aa4.14□□□□□ -1.75
SMG1-206ENST00000562668 ZNF317Q96PQ6 595 aaPredicted RBP4.14□□□□□ -1.75
SMG1-206ENST00000562668 CCT7Q99832 543 aa4.14□□□□□ -1.75
SMG1-206ENST00000562668 EBF4Q9BQW3 602 aa4.14□□□□□ -1.75
SMG1-206ENST00000562668 NUDT9Q9BW91 350 aa4.14□□□□□ -1.75
SMG1-206ENST00000562668 NUF2Q9BZD4 464 aa4.14□□□□□ -1.75
SMG1-206ENST00000562668 ING2Q9H160 280 aa4.14□□□□□ -1.75
SMG1-206ENST00000562668 ZNF385DQ9H6B1 395 aa4.14□□□□□ -1.75
SMG1-206ENST00000562668 WDR55Q9H6Y2 383 aaPredicted RBP4.14□□□□□ -1.75
SMG1-206ENST00000562668 CHODLQ9H9P2 273 aa4.14□□□□□ -1.75
SMG1-206ENST00000562668 COPS7BQ9H9Q2 264 aaPredicted RBP4.14□□□□□ -1.75
SMG1-206ENST00000562668 ZBTB20Q9HC78 741 aaPredicted RBP4.14□□□□□ -1.75
SMG1-206ENST00000562668 ZNF160Q9HCG1 818 aa4.14□□□□□ -1.75
SMG1-206ENST00000562668 NOX4Q9NPH5 578 aa4.14□□□□□ -1.75
SMG1-206ENST00000562668 SLC52A3Q9NQ40 469 aa4.14□□□□□ -1.75
SMG1-206ENST00000562668 CYSLTR2Q9NS75 346 aa4.14□□□□□ -1.75
SMG1-206ENST00000562668 NMRK1Q9NWW6 199 aa4.14□□□□□ -1.75
SMG1-206ENST00000562668 MS4A12Q9NXJ0 267 aa4.14□□□□□ -1.75
SMG1-206ENST00000562668 AHSPQ9NZD4 102 aa4.14□□□□□ -1.75
SMG1-206ENST00000562668 C5AR2Q9P296 337 aa4.14□□□□□ -1.75
SMG1-206ENST00000562668 MARCOQ9UEW3 520 aaPredicted RBP4.14□□□□□ -1.75
SMG1-206ENST00000562668 BAIAP2L1Q9UHR4 511 aa4.14□□□□□ -1.75
SMG1-206ENST00000562668 PHF11Q9UIL8 331 aa4.14□□□□□ -1.75
SMG1-206ENST00000562668 FBXL4Q9UKA2 621 aa4.14□□□□□ -1.75
SMG1-206ENST00000562668 TMED5Q9Y3A6 229 aa4.14□□□□□ -1.75
SMG1-206ENST00000562668 CACNA1GO43497 2377 aa4.14□□□□□ -1.75
SMG1-206ENST00000562668 EXPH5Q8NEV8 1989 aa4.14□□□□□ -1.75
SMG1-206ENST00000562668 GOLGA8QA0A0J9YX86 632 aa4.13□□□□□ -1.75
SMG1-206ENST00000562668 FAM172BPA6NC97 362 aa4.13□□□□□ -1.75
SMG1-206ENST00000562668 GOLGA8OA6NCC3 632 aa4.13□□□□□ -1.75
SMG1-206ENST00000562668 GABRR3A8MPY1 467 aa4.13□□□□□ -1.75
SMG1-206ENST00000562668 GOLGA8NF8WBI6 632 aa4.13□□□□□ -1.75
SMG1-206ENST00000562668 SLCO1B7G3V0H7 640 aa4.13□□□□□ -1.75
SMG1-206ENST00000562668 PSMD12O00232 456 aaPredicted RBP4.13□□□□□ -1.75
SMG1-206ENST00000562668 CLDN4O14493 209 aa4.13□□□□□ -1.75
SMG1-206ENST00000562668 HSPA12AO43301 675 aa4.13□□□□□ -1.75
SMG1-206ENST00000562668 ZNF354AO60765 605 aaPredicted RBP4.13□□□□□ -1.75
SMG1-206ENST00000562668 CRCPO75575 148 aa4.13□□□□□ -1.75
SMG1-206ENST00000562668 TGDSO95455 350 aa4.13□□□□□ -1.75
SMG1-206ENST00000562668 PSMG1O95456 288 aa4.13□□□□□ -1.75
SMG1-206ENST00000562668 CLDN14O95500 239 aa4.13□□□□□ -1.75
SMG1-206ENST00000562668 NADKO95544 446 aaPredicted RBP4.13□□□□□ -1.75
SMG1-206ENST00000562668 TK1P04183 234 aa4.13□□□□□ -1.75
SMG1-206ENST00000562668 ATP1B1P05026 303 aa4.13□□□□□ -1.75
SMG1-206ENST00000562668 SERPINA7P05543 415 aa4.13□□□□□ -1.75
SMG1-206ENST00000562668 SLC35E2P0CK97 266 aa4.13□□□□□ -1.75
SMG1-206ENST00000562668 G6PDP11413 515 aa4.13□□□□□ -1.75
SMG1-206ENST00000562668 PRPS2P11908 318 aa4.13□□□□□ -1.75
SMG1-206ENST00000562668 CPMP14384 443 aa4.13□□□□□ -1.75
SMG1-206ENST00000562668 IL12AP29459 219 aa4.13□□□□□ -1.75
SMG1-206ENST00000562668 MAP3K8P41279 467 aa4.13□□□□□ -1.75
SMG1-206ENST00000562668 MRPL19P49406 292 aaKnown RBP4.13□□□□□ -1.75
SMG1-206ENST00000562668 OR4D2P58180 307 aa4.13□□□□□ -1.75
SMG1-206ENST00000562668 ERVK-8P63133 956 aa4.13□□□□□ -1.75
SMG1-206ENST00000562668 FUT7Q11130 342 aa4.13□□□□□ -1.75
SMG1-206ENST00000562668 AIMP2Q13155 320 aaKnown RBP4.13□□□□□ -1.75
SMG1-206ENST00000562668 BIKQ13323 160 aa4.13□□□□□ -1.75
SMG1-206ENST00000562668 IMPG1Q17R60 797 aa4.13□□□□□ -1.75
SMG1-206ENST00000562668 PRICKLE4Q2TBC4 344 aa4.13□□□□□ -1.75
SMG1-206ENST00000562668 LCE1FQ5T754 118 aa4.13□□□□□ -1.75
SMG1-206ENST00000562668 IL23RQ5VWK5 629 aa4.13□□□□□ -1.75
SMG1-206ENST00000562668 TMEM198Q66K66 360 aa4.13□□□□□ -1.75
SMG1-206ENST00000562668 FAM180BQ6P0A1 224 aa4.13□□□□□ -1.75
SMG1-206ENST00000562668 PAPD4Q6PIY7 484 aaKnown RBP4.13□□□□□ -1.75
SMG1-206ENST00000562668 IGFL3Q6UXB1 125 aa4.13□□□□□ -1.75
SMG1-206ENST00000562668 FAM47EQ6ZV65 393 aa4.13□□□□□ -1.75
SMG1-206ENST00000562668 IKBIPQ70UQ0 350 aa4.13□□□□□ -1.75
SMG1-206ENST00000562668 CAMKMTQ7Z624 323 aa4.13□□□□□ -1.75
SMG1-206ENST00000562668 TICAM1Q8IUC6 712 aa4.13□□□□□ -1.75
SMG1-206ENST00000562668 ST13P4Q8IZP2 240 aaPredicted RBP4.13□□□□□ -1.75
SMG1-206ENST00000562668 KIRREL3Q8IZU9 778 aa4.13□□□□□ -1.75
SMG1-206ENST00000562668 LIX1Q8N485 282 aa4.13□□□□□ -1.75
SMG1-206ENST00000562668 KIF2BQ8N4N8 673 aa4.13□□□□□ -1.75
SMG1-206ENST00000562668 KRTCAP2Q8N6L1 136 aa4.13□□□□□ -1.75
SMG1-206ENST00000562668 ZNF615Q8N8J6 731 aa4.13□□□□□ -1.75
SMG1-206ENST00000562668 MORN4Q8NDC4 146 aa4.13□□□□□ -1.75
SMG1-206ENST00000562668 VPS37AQ8NEZ2 397 aa4.13□□□□□ -1.75
SMG1-206ENST00000562668 B3GNT7Q8NFL0 401 aa4.13□□□□□ -1.75
SMG1-206ENST00000562668 CLHC1Q8NHS4 586 aa4.13□□□□□ -1.75
SMG1-206ENST00000562668 M1APQ8TC57 530 aa4.13□□□□□ -1.75
SMG1-206ENST00000562668 ZNF675Q8TD23 568 aa4.13□□□□□ -1.75
SMG1-206ENST00000562668 LRRC8CQ8TDW0 803 aa4.13□□□□□ -1.75
SMG1-206ENST00000562668 DOK4Q8TEW6 326 aa4.13□□□□□ -1.75
SMG1-206ENST00000562668 APOBEC4Q8WW27 367 aaKnown RBP4.13□□□□□ -1.75
SMG1-206ENST00000562668 PPWD1Q96BP3 646 aaKnown RBP4.13□□□□□ -1.75
SMG1-206ENST00000562668 TUBGCP3Q96CW5 907 aa4.13□□□□□ -1.75
SMG1-206ENST00000562668 NTNG2Q96CW9 530 aa4.13□□□□□ -1.75
SMG1-206ENST00000562668 TEX37Q96LM6 180 aa4.13□□□□□ -1.75
SMG1-206ENST00000562668 PPP1R36Q96LQ0 422 aa4.13□□□□□ -1.75
SMG1-206ENST00000562668 PPP3R2Q96LZ3 170 aa4.13□□□□□ -1.75
SMG1-206ENST00000562668 TSSK3Q96PN8 268 aa4.13□□□□□ -1.75
SMG1-206ENST00000562668 CENPKQ9BS16 269 aa4.13□□□□□ -1.75
SMG1-206ENST00000562668 C1orf50Q9BV19 199 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms